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Locus Information
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| Standard Name |
Uncharacterized |
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| Systematic Name |
PAS_FragD_0018 |
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| Alias |
PP7435_Chr4-0018 |
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| Strain |
GS115 |
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| Description |
Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation |
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| External sources |
Open in GenBank 
Open in KEGG
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Gene Sequence
Download FASTA
Hide Seq |
>PAS_FragD_0018 size 4950
ATGGACCGTGAACAATTAACCTCAGAAGTGAATCAGGCTTACAATCGCTGGCTTCAAATG
AATCAGCAATATGGCCAACAGGCAACTAGTTACCCAGAATATATACAGTTGACCAAGTAC
TTGACGTTCGCAGCCAAAAACAAGGACAACACAACAAATCAGCAAGAGTCTCATATAGTT
GACCAATCATATGGAGAAGGTACACATCGCTTTCTGGAGCGGCAGCAAGAGCACAATTTG
GGCCAAGGACAAACACAAAAGGAGGAACAAGTTGAGCAATCTGAACTATCAGATCAATTA
GACCACCTAGAAAAACCAGAGGACCTCGATCATTCAATGCAACAAGTACTGACCAATAAA
TCCGAAAAACCAGTTCAGCCAGGGTCACAGTTTTCAATGCAAGAGCCAAGTTTCTCTGAT
GTATTACCTCATGTCCAAGAGCAAGAAAAGCGGTTCTCAAGTACTACATCTTCTGATATA
CACTCCACTGCCTATGACCAGACCCAAAGTGCCTCCTCTGTTGTTAATCCTTTACAAGCG
TATTTGCCCAATAATCAACTGCCACCCGAAACTTTTTCTGGCCAAAATTATAACACTATA
CGGCAGGACCAAGACCACCAGCAAGAGCAAAAGCAACCTCAAGTAGCTACTAGCAGTATG
AATGCGACTACAATTTTCAATTCACAGCAATCGTTTCTTTTGAAGGCGCAGCTTACCGCA
TTCCGGGGATTAGCAAAGAATCAACAGCTGCCTCCTGAGGTGCGACAAGTTCTTTCGACT
GCCTATAATCAACTGAAGCAACGAGTCAATACACCAGTGGAGAATACAAAGTCTAGAGGT
GTCAAAACAGATTTAGAGCATTCTCAGGATGCATTCAAGGAGCACGGTTTTAACCAATCG
ATGCAACAATCGATATCCCAGAATTTGCCACAGAATGTTAGTCAATTGCAAAATTATTCC
CAGGCACCTGTCGGCCATCCAGCATCAATTGGTAAAGGCTCTCAGACTGATAAGAGCGTG
GGATTTAAAGGGAAAAGGGATTCATCACTTACTGCAAGCAAAACTCCTAAGCAACCATAT
CTTCTCCAGCAGAAACACATACAAACACAGCCTAACATATCGTCACCACAATTTCCCAAT
TCTCAAATGACAACACAACTCATTCCACAATCGGGTCAAGAGGTTGCTAGAGTGGCAAAC
ACTTCTACACCCTTGATCCTGAAAATGTTTCCTCCAGACACTCCACCTGTATCTATATCT
GAACTCACAAAAAAAATGCCCACAGTTTTGAATATTGTGCAAGTGCATGATCCCACTGTG
AAAGTAGACAGTTTTACTGTCCCGTTTGCCCCTCCGAAGGGCTCGATTCCATTCGAATCT
TTAGCAAGCCACAGGTCAAGCATGTTATTACCAAGTGTCCATCCTCCAGTGATCAACACA
TCTGCTGCAAGAGAAACATATGACCTTCTTCATAGCTTGAGCATTGACTATTATAAGGAC
TCATTAGAGAAAATGCGAATGGAATCGAATTTTCATAATGAAACTGCTTTGAGAGGTTTG
GAGCTTGAACTTGATGCCATCATGCTACTTCCTCTCCAGAAGGCCTTGAGAGGCCACATT
CTATCCATTACCCATCATCAAAACTCTTTACTAATCAACAACCATCCTAATTTTCTTTCT
AAAACTCGGAAAGTATCTATTGATGATGCTGTGGTTACGAACAACTTGTATGTTCAGCAA
CAGTCTCTTGCTGTGCAGATGGAGCAAACCAAACAGATCAAAAAGCTAGATAATATCATC
GAATCCTCCAAATATCTAAAGGATTGTAGAATGACTATGAAAGAAAGACGTTCCAAGATG
GGAAAACTTATATATCATTTTCATTCGTTAGTCGAAAGAGATGAGCAAAAAAGGATAGAA
AAGAATGCTAGGCAACGGCTGCAAGCTTTAAAAGCTAATGATGAGGAAACCTACATCAAG
TTATTGGATCAGACGAAAGATGCAAGAATTACACATCTTCTAAAGCAGACAAACAGTTTT
CTGGACTCTTTGGCCCAGGCAGTAAAAGACCAACAACAAGAATCTAAACTTTTTCTCGGA
GGGGGATCTACATATATGGATGACAATCTTGACGCAAAAGACAATAACGACTCAAGCACC
GACTATTATAGCATTGCTCATAAAATTAAGGAAGAAATTACCAAACAGCCAACGATATTG
GTGGGAGGGGTTCTAAAAGAATACCAGGTGAAAGGTTTGCAATGGATGGTATCACTGTTT
AATAACAAACTGAATGGTATTTTAGCTGATGAAATGGGTCTAGGCAAGACGATTCAGACC
ATTTCTTTGCTCACTTATTTAGTAGAGAAAAAAAACATACCGGGCCCCTTTTTAGTGATC
GTTCCTTTGTCGACGTTAACCAATTGGAATTCTGAGTTTGACAAATGGGCTCCTTCGCTA
AAGAAAATAACCTACAAGGGCAATCCCCAGTTCAGGAAAACTGTTCAGGCTGATATTAGG
GCGAAAAAGTTTCAGGTTCTGCTGACCACCTATGAGTACATCATTAAGGATAGGCCTTTA
CTGAGCAAAGTGAAATGGGTGCATATGATAATCGATGAAGGGCATAGAATGAAGAATGCC
AATAGCAAACTATCGTCAACTTTAACCCAGTACTATCACTCGGATTATAGGCTAATTCTT
ACGGGGACACCACTTCAAAATAGCCTTCCTGAACTTTGGGCACTTTTAAACTTTGTTTTA
CCCAAAATTTTCAATTCTGTGAAATCTTTTGATGAATGGTTCAATACCCCTTTTGCAAAT
ACTGGTTCTCATGATAAAATAGCCTTATCGGAAGAAGAAACTCTTTTGGTCATTAGAAGA
CTGCACAAAGTATTGAGACCGTTTTTATTGAGGCGCCTGAAAAAAGACGTTGAAAAGGAT
TTACCAGAAAAAATCGAAAAAGTCGTCAAATGCAAATCGTCAGCTTTGCAGATTAAATTG
TATGAGCAAATGCTCAAATACAACCAACTCTTTGTTGGCGATGAATCAAAGAAACCAATT
GGTGTAAAGGGCTTAAATAACAAGCTTATGCAGCTGAGAAAGATCTGTAATCATCCTTTC
GTTTTCGAAGAAGTAGAAAATTTGATAAATCCCACCAGAGAGACCAATAATAATATCTGG
CGTGTCAGTGGAAAGTTTGAGTTGCTTGACAGAATTTTGCCCAAGTTTAAGGCCACTGGG
CACAGAGTACTAATTTTCTTTCAAATGACTCAGATTATGGATATCATGGAAGACTTTTTG
AGGCTCAGGGATATGAAATATCTAAGATTAGATGGAGCGACCAAGTCTGATGACAGACAG
GACATGTTACGACTGTTCAATGCTGAAGGCTCAGATTACTTTGCATTTTTGTTATCTACA
AGAGCTGGTGGCTTGGGTTTGAACTTGCAGACTGCAGATACCGTTATTATTTTCGACAGT
GATTGGAATCCTCATCAGGACTTACAAGCTCAAGATAGAGCTCATCGTATTGGCCAAAAG
AATGAGGTGCGGATTCTTCGGTTAATTACAGAAGATTCGATTGAGGAAGTCATCTTGAGT
AAGGCGTATGAAAAGTTGGATATTGACGGAAAAGTTATTCAAGCAGGTCGATTTGATAAC
AAATCTACTGCAGAAGAACAAGAAGCTATTTTGAGGCAATTGTTAGAAGCTGGAGAGAGT
AAAAAATCGGACTCTGAATTCGATGACGATATGGATGATGACGAGCTAAATCAGTTATTA
GCTAGAGATGATACTGAACTAAGAAAATTCCAACAATTGGACAAGGATAGAGTAGAAGAG
ACGAAGATTTTGCCCAGGCTCTTCACTGAAGCGGAATTGCCTGAAGTTTACAGCCAGGAT
CCCGACTTGTTCATGCAGAAGAATGAGGATATTGATATTTATGGTAGAGGAAACAGGGAA
CGCAAGATGATGCACTACGATGATAACATGACGGAGGAGCAATGGCTACGTCAGCTAGAG
GATTCTGAAGATGATAACGATGGACCTGAACCCGGAAGAAAAAGTAAGGGAAAGGCAACA
GATGACGGCCTCACATTTACAGAAGGTGGCACAAAGCGTGAACTGAATGACTTGGAAGCC
GAAACTAATGTCGTCGATGTCCGCAAGAAACATAAGAGTGATAATAAGCCTATGAAAGTC
GCAAAAATTCGAACTCTCAAGCCAAAAGATGCTGGACGTACCAAGGGAAAATTGAAGCCA
GGCTTCAATGTCCCTCTTTCTAGACATTTGTTCTCGACATTACCGGTTTTAGACAACCGT
GAGAGACAACAGTTGCAGGACAATATCACTGCAATCAATAACCATCTTTTACAGTATATG
AAAGATGGTCGTAACTTGAGTGTCATCTTTTTGACGAAACCCCCCAAGCGGCTTTATCCC
GATTACTACATTTTAATCAAGTACCCCATTGCGTTTGATGTTATCAAGAAGCGAATCAGT
CGACTAGTCTACGTTTCTTTGGAAGAATTCATGAACGATATCCACCTGATGTTTAATAAT
GCCCGCACCTACAATGAAGAGAATTCAGTTGTCTACAATGATGCAGAATTGTTGGAAGGA
CAGGCTCTTTTGAAATATAGGGAGATCACCGGGAACTCTACCATTGATTTTAGCAATCTG
GATTCAATGCTTGGTATCAGCAAAATGTCTCAAACCCCAAAAGATACAAGCAAGGTTGAA
AATAATTTTACTGGTGACAATCAACAGTTAGAGACAGCATTTATGCCAAGGTTCAAAGAA
GATAGTCCCCCGCGTACCTCCACTGCCAAGTACGTTTCAAAGCTCAATGATAATGAAGGG
ATCTCTGATTCATCTATATTAAGCGACACTGCGACTACAGATTTCGAGTCGTCTGGACGT
GTTCCTAATGCACAGCCCTTGAAAGAGTAA |
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Promoter Sequence
Download FASTA
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>PAS_FragD_0018 upstream sequence, from -1000 to -1, size 1000
ACATGGAAGATTTATTCTAGACGATACAAGTATAGTTTCAACAGTTGAGTATCGAAACGC
TTCAGTTTTTATGGACCCTTCTTTCCTCTTGGAAATGTACTAGCTTAATTTCCGTTGGAT
CTCAATACTGGAAGGCCAATATCCAGTCTGTAGCTTCATCTAGTTCTTGGAACTACTGTT
CCTCACTTCGCGGAAGCGACTGCGTGCACAGTGATAACTAGTACCACCGTGCTAGATCGT
TCTCTTCTAGGTTCCAACAATTCCAGGGCAAAAGTAAGTAATGTCTCTGAACTGTGTGAT
CCTAAATGATAGCATGACATCTGATACGTCTAATGACAGCAGTTTGCCGTTTATTCCGCT
TCCAGGCGAACTGGTAGTTTATCGTTCACCAGATAGGACTAGTTTACAAATTACAATTCC
ACACTCTTTGATGAGACGAAATTTCCTCAAAGCCGTAGGAAACGTTTACGTCACCAATAA
AAGAGTTCTGATGATAACAAGTGCTCTACGAGGTGGCGACTTTCAAAGTTTTAATTTGCC
GTATAGGACTATCACTCAATCTGAATTAGTAACTCCATGGATTGGGCCTACCAGATGGAG
ATGCAGCTTTATAGTAGTCAATCCTTTGGAATGTGGGTTGCCTCTAGCTTCAAATCAGAC
ACATCATTGTTCGCTGGAGATTGTATTCAATGAGGGAGGTTTTGTTGAGTTTGTTAAGGA
GTTTGAAACGTTATTTATTGAAGCAGGAAGATCAGCAGGTATAGAAGAAGAGGACTTGCC
AGCGTACCAGGAACCCGATAGCATGTGACACATTTCATTGTCCTTTGAGCTGAAAGATTT
TACTGTCTGTAGCTACAGCTACAAAATTTCTGGCATTGTAATATTATAGCTATATGAGCT
TAACTTACGTAATCAATATTGAGTTGTAGTGCACAGACAATTTGCCATTTGTCAGAGTAT
ACATACAGTATTGTCATAGCCAAGTCTTATCTAGCAACAA
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| Chr coordinates |
Chr chromosome 4 from complement(join(1749754..1754658,1754718..1754762)) |
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