|
|
Locus Information
|
|
| Standard Name |
Uncharacterized |
|---|
| Systematic Name |
PAS_chr1-3_0183 |
|---|
| Alias |
PP7435_Chr1-0184 |
|---|
| Strain |
GS115 |
|---|
| Description |
RNA-binding subunit of the mRNA cleavage and polyadenylation factor |
|---|
| External sources |
Open in GenBank 
Open in KEGG
|
|---|
|
Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr1-3_0183 size 4167
ATGGATGTTTATCATCAATTTCTTGAACCGACGGTTTGCACGCACTCTCTGTCTGCAAAT
TTTACGAACTCTGTCAAGAATGATTTGATAATCGCCAAGGGGACACTCTTACAGATCTTT
GAAGTCATCAATGTTACCATAGAAAACAAGCAGGACGAAGAACAACCAGACTTGGAGTTA
AATGGTGCTGCTTTTGGTATTGGTGAAATCAATGAAGATGCACTGAATGTGGCGGCAATT
GATTTTTCTCAGAATGTCAAGTTGTCACTTGTGGCAGAATACAAGTTGGACGGTCTTGTG
ACAGACCTGTGCAAGATACGAACTATCGAAGATTCACATCATGATTATGTGCTGGTTGCT
ACGAAGGGAGTCAAATTTTCTATGATCAAATGGGATCAATCATCGAATTCCATATCAACG
GTCAGTTTACATCATTACAAAAAGATTGTGGAGAATTCGTTGATAGATAAATTCAATGTC
GACACGAAGTTAATTGCAGATCCCAATAACCATTGCTCGTGTTTGCTAGCTAATGAGATC
TTGTTTTTTCTACCGTTTTTACAGCATGAGGTGGATGAAGAACTAGATGGTAAATTCGTA
GAGAACAAAAAGCTGTATTCTAACACTTTTTTGCAGTTTTCCAATGACTTGCAGCCAAAC
ATCAAAACTATTATAGATATTGAATTCCTGCATGGCTACTCGGAGCCAACTTTGGCTGTC
CTATACACTTCTTTCCCTACGTGCACTGGCGCTCTTCCCAAAGCAAAGGATACTGTCAGC
TTACAAGTTTTCTCATTGAATCTACAAAACAAAGCAAGTACCAGCATTATTGAAGTAAAT
AACCTTCCTTATGACACTGACAGGATTCTACCACTGTCTTCTCCTTTGAATGGATGCTTG
CTCATCGGAGCGAATCAAATTATTCATCTAAATTCCATGGGTACCGCTAAGGGAATAAGT
TGCAACCTGTTTGCTGCCAAGTGCTCTAATTTCAAACTAAGCGATCAATCAAACTTAGAC
TTGAGGCTTGAGAAATGTGTACTTGGACAAGTTTATAATGATAAAGTGATTCTGATCACC
GAGAAGGGTGCCTTTTATGCTTTTAGCTTTGATATTGTTGGAGGTGTCAGTTCGATAAAT
GAAATTCAAAAGATCGCTGCTGAAAAGTATCAAGGTTTAGTGCTTTCATTGCCAACCATG
TTCACTAACATAGATGGGAAGACTTTCTTTATTGGATGCCAAGGTTCTGACAGTGTTCTG
TTTGGTTCCAAGGCGCGCTTGAACACTCAGAATGTCGATGTCAACGGAAAATCAAAGGTT
ATAACTGAGGAAGATGCCTTATACGAAGAAGATCTTTATGCAGACGATATTCAGAATGTG
GCTCAAGGAATTGATCATATAGATTTTGTTAAACTAGACTCCCTGCTAAACATAGGCCCT
ATAACAAACTTTACAACTGGTTCTATTGAGTATAGATCCAAGCTGCAAGGTCTTCCGAAT
CCAAATTGGAATGATGAATGTATTATCGCAGCTGGAGGATTACATGAATCCGGCCAGTTA
AGTCTTATACAGCCTACGATTTCTCCTACTGTGAGATCTTCCTTAACGTTTAATAATGTG
GAGAAACTGTGGACCTTGGAGGATGAGAACGGAGATTCGCATTACTTGATTACAACTGAC
TCCAAAAAAGCCAACACTGAAGTGTTCTTGGTTAAACAAAACTACAAACATTACTCTTCC
AAGGGATTTGTTACTGGGACTTTCACCAAACATATAGCAGTCATCCCTGGTAAGGATGGA
ACTGGTAGCTATGGAGAGTCACGTATAGTGCAAGTGACTGCTGAGAATGTGATACTTTAT
GATTTCAAGCTCAAGAAACTTTTGTCATTGAGTTATGAAGGTGATGACATAGTGTCTGTT
GATACTTTTGAAAACTACATGCTAATTACTAAAGAGAGCGGTATGGCTGATATTTTGCAC
TATGACGAAGAGATTGAGGCAGTGGAGCATGGTGATAAAAAAGAGTCAGATGGAGAAACC
TCCAGTAAAAAGTCCAAAACTTCCAAGAAAGGTAGAAAAAGACGAAGGAAGGAGGAGAAG
ATGGAAGCATTTAGGGTGAATCACAAGCTCGATGTGATCCCACTCCCTAAGGCTCTTAGT
CAAAATGACTATATTTTTATTACTGGATGTATTGCTAACTCTGACATTTTGAACAAAGTG
GATATAGGCTACAACAACATAATTTTAGAAAATGGAGAAAAAGGTAAAAAAAGTCTTGTT
TTCTTTCTTGTTACAGCAGAGAATTCAATTGTGATGTTTCTTGAAAACCATAAGGAAAAG
GTGTTCAAGTTGAGCGAGGCCAAAGACTTTTCGACTTTCTTGAACATCGAACTAATCAAA
GTCGGTGAAATTGGCCAACCAGATCCCTTTATCAAACAAATCACCGTTAGTGAAATTGGT
GACGAAATTGAAAAGCAGGTATACCTAACTATTTTGACCATTGGGGGTGAAGTGATAATC
TATAAACAAGTGCTAAACAAGGACTCAGGTACATTCCAGTTTATCAAAGACAACTATTCC
GCAAACATTACCATTACTGGCGCACCAGATAACGCTTATCCTCAGGGAACAAAGTTAGAG
AGAAGATTGATAAAGTTAAACAATATAGGAGATTCCAAGCTCAGCACTCTATTCGTGGTA
GGGGTGAAGTCTTTCTGGATTACGAAAAGACATTCTTCATCCATCAATATTCACCAATTT
ACAAAACTATCTACTATTTCTTGTGCCAGATTCAATACATCAAGATGCAAAAACGGTCTA
ATGATAATCGATACCAACAAAGCCGCCAGGATGGTAGAAATTCCTTCAAACTTGGAGTTG
TCTCAAAGACTTCCAATTAGAAGAGTTCCAGTTGGTTGCACTATCAAATGTGTTGCATTT
CATAAAGCATCTAGAACGTTTGTTGTCTCAACAGTGGAAGAAACTCCGTACAATTGTGTC
GATGAGGAGGGAAATCCCATTGTTGGGGTGGACAACACAATAAACAAACCTGCCAGCTCG
TTCAAGAGTTCAATTAAGTTGATATCGCCCATAAGTTGGACAGTAATTGATAGTTTTGAT
TTGGAAGACGAGCATGTGTGTATGAGTCTTAAATCCATGACTTTGAACACATCCAGAATT
CCAATGTTTAAGAATCTGAAAGAATATTTGGTACTGGGTATCTCTAATTACCGTATGGAG
GATCTTGCCTCAAATGGGCAAATTAGAATTGTCGATGTAGTGGACATCATTCCTGAACCA
GGCAAACCTGAAACTAACCACAAGTTCAAGGACATCTTTCAGGATGCTACTAAGGGTGCA
GTTACTTCAGTATCCGATATAAGTGGGAGATTTGTCATTGGCCAGGGTCAAAAAATTATT
GTTCGTGATTTGCAAGAGGACAATACAGCTCTACCAGTAGGTTTCGTTGATACCCCATTT
TATGTATCAGAAACCAAGAGTTTCCAAAATTTGCTGCTGGTAGGTGATTCTATGCATAGC
GTAATTCTTGTTGGGTTTGATGCCGAGCCTTACAGGATGATAAGTCTAGGAAAAGACGTT
GCGCACGTTGATGTGTGTGCAGCCGATTTCGTTGTCTTTGAAGGAAATTTATTCATAATT
ATTGCAGATGAGGACGGCATGTTGCACCTTATTCAATACGACCCCGAAGATCCAGCATCA
ATGCAAGGACAGAGACTGTTAAGAAGGTCAATATTCAAAACCAATCAATATACGACCTGT
ATGAAAATGAGAGAAAGAAAATATGTCATAAAACCCCCAAAGAACCAATTCACAAACTTC
TCGGAGGCATTTGAAGTTGTTGCTGCAAATTCAGATGGCTCTTTCTATAAGGTTACCCCA
ATTTCAGAAGCTACATACAGAAGACTGTACGTTATTCAACAACAGATCTTTGATCAAGAA
AATCACAAATGTGGATTGAACCCTAGAGAAAACAGATACTTGTCGGATCAGTATTCGATA
CCAAATCAAAGGCTAATCTTAGATTTTGACAATATCAGGCGATTCCTGGAGTTTGACGAG
ATTAAGAAACGTGATTTGGTGCATAAATTGGGCAGAAACACTTATTCTGAGTTTTACAGA
GATCTCTTGAATCTACAGGAGCTCTAG |
|---|
Promoter Sequence
Download FASTA
|
>PAS_chr1-3_0183 upstream sequence, from -1000 to -1, size 1000
CATGTCTAGAAGCAGCGACTGCCACACAAGCAAGTCTAAATTGGGCCGCAGCCTTAAAAT
GCAGCTTCTTGCAACTCATATGTTCTATCCATTCAGACTTTAAAATATCGCACTTGTAAG
CCATAGACAGAGCTTCATCGTAAAATTGAGATACTTGAAAGGCCAACCTTGCAATAACGT
TATCTTTTAAAGTGTTAGAAACAGCCTTTTGCCAAAAACATTCCTGGGCCTGAGCCAGCA
TGAGTTTAGCCAGGGTTTTCATAATGTTAACACTAAGATCAATGGGAAGTGTCAGCTCTT
TCGGTTTTTGCTCCACTAGCTTCAGTACACTTTCGAATGCCCCACTACTATACTGAAAAT
AAATGCATGATTTTTTCAAGCCTTCTCCTGTAGCTCTGGGCTCGTTTAAACCTATGATTG
AATACGTCGCTGCGATGTTGTACGCTATATTGATTCTTTCGAAATAGAGGGATTTTAGAG
CTACGGGGCCAGTTACTTGGTATCCTAATGTTCCAAACCAGGGATACTCCATAAAATAAT
CAGGGAGTTTTTGGCTAATGCTGGCTAACTGTACATAGTATCTCTTGAGCAATGCAAGTC
CATCATTGTTTGGTTCTATTGATAGGACATCATTTCTTAGTTGGTCGATCTCTTCGATAT
CCGATTTGAACGCAGCAGATGTCTGGTAGTACTGATTGTTGATAAGCTCTTTTAGGCTTT
CGCCTAACGGTATCGGCTTTGACGTTCGTAAAGGAACACTTAGCAGGTTGAAGCTCATCA
CCCGTGTTTGAACTGATACTTGAAACGTAAATATCAATAGAGCCACTCTTCGAGCAAACC
CATTTCCTAAGTATTCTTTACTGGGGCCACCTCCGGCCTTGGGCCCAGAATTTTCCTCCT
TCTCGACCACACATCTTTTCAGCCTTCCACGCTCTCCCGTCTTCTTTCTTAACCCAACCG
ACCCTCTTCCAAGTTCAAAAAGCAGTCAACCCCAGGACCA
|
|---|
| Chr coordinates |
Chr chromosome 1 from complement(343920..348086) |
|---|
|
|
|
|
