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Locus Information
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| Standard Name |
Uncharacterized |
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| Systematic Name |
PAS_chr1-4_0204 |
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| Alias |
PP7435_Chr1-0979 |
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| Strain |
GS115 |
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| Description |
Component of the holoenzyme form of RNA polymerase transcription factor TFIIH |
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| External sources |
Open in GenBank 
Open in KEGG
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Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr1-4_0204 size 2463
ATGTCAAGGAGACCAGCAGTCAACTACTTGGAGGATGAATTCTCTTCTGATTCATACAGT
GAGGAAGAATTTCCGAAAAGAAGGAAAAAGGTTAACAAGAAGAAAGCCCAGTCTGCTATG
GATGAGATCAAGAAACAGAACAAGGACACCAAATTTGAAGAAGATGAGTTGATTGAGATC
CCCTTGGATAGACCATCGGATTTTATACCTGATTCAGTCTCCAAAGTATTTGGATCGTCT
GATTTTTCCTATTTGAAGCTGAAGCCTGATCATGCCTCAAGGCCTATATGGATCTCTCCA
AATGATGGTAGGATCATATTAGAAAGTTTCTCACCCTTAAGTGAGCAAGCACAGGACTTT
TTGGTAACCATTGCTGAGCCGATAAGTCGTCCCAGCTTTATTCATGAGTATCGAATTACT
GCTTATTCCCTGTACGCTGCTGTCTCTGTGGGGCTAGAAACCGATGATATCATTTCGGTG
CTGAATCGTCTATCCAAAGTACCTGTGGCACCTTCGATTGTGAATTTTATTAGATCTGCC
ACCATTTCATATGGAAAGGTCAAGCTAGTTCTGAAGAACAATAGATACCATGTAGAAAGT
TCGCAAGCAGATATTCTGCAAATGTTACTAAAGGACGAGGTGATTGGCCAACTACGAGTT
AAATCTGATACGTTGACAACTACCAGCGATGGATTGGTACGTACGAATAAGCCAAAATCT
GATGGCCTTGTCATTGCGGGTACAGCTGCTCCTGCGAGCGACAATAGCATCACCAACACT
TTCAACACAGCTATAGGAAGTGACCCGTTCGAAGATAAAGTTGAAGAGGACGATGAGGAC
GAAGATGATGATATTGATAAAGTTCATTCGTTCGAAATTGCCTCGGAATCCGTTGAAATC
GTCAAAAAGAGGTGCCAGGAAATTGATTATCCAGTCTTGGAAGAGTATGATTTCAGGAAT
GATCAGCGGAACCCTGATTTGGACATTGACTTGAAACCATCGACGCAAATCAGACCATAT
CAAGAAAAGTCTTTATCTAAAATGTTCGGTAATGGACGTGCTAGATCGGGTATCATCGTT
CTTCCATGCGGTGCTGGTAAGACCTTGGTTGGCATCACTGCAGCTTGTACCATTAAGAAG
TCTGTTATTGTTCTTTGTACATCATCAGTGTCAGTAATGCAATGGAGACAACAATTCTTG
CAATGGTGCACGATTCAACCAGAAAATGTTGCTGTTTTCACATCAGAAAACAAGGAGATG
TTTACTGGTGATGCTGGTCTGGTCGTATCTACTTACTCTATGGTCGCTAACACCAGAAAT
AGATCTCACGACTCTCAAAAAGTTATGGACTTTCTTACTTCGAGGGAGTGGGGTTTTATC
ATTTTAGATGAGGTCCACGTCGTACCAGCTGCAATGTTCAGAAGAGTGGTCACAACTATT
GCCGCCCACGCAAAATTAGGCTTGACAGCAACATTAGTTCGTGAAGACGATAAAATTGGT
GATCTTAACTTTTTAATCGGACCAAAGTTATATGAGGCCAATTGGATGGACTTGGCTCAG
AAAGGTCACATAGCCAATGTTCAGTGCGCCGAAGTTTGGTGCCCAATGACTTCTGAATTT
TATCAAGAATATCTCAGAGAAACCTCACGTAAGAGGATGTTATTGTATATTATGAATCCC
ACCAAGTTTCAGGCATGCCAGTTTCTTATTCATTACCACGAACAACGAGGTGATAAGATT
ATCGTTTTTTCTGATAACGTCTACGCCTTGCAAGAGTATGCACTAAAGCTTGGTAAACCA
TTTATTTATGGATCCACCCCACAGCAGGAACGAATGAACATCTTGCAAAACTTTCAGTAT
AATGATCAGGTCAACACAATTTTCCTTTCAAAGGTAGGTGACACATCTATTGATTTACCA
GAGGCAACATGTTTAATTCAAATTTCTTCTCATTATGGTTCTAGACGTCAAGAAGCTCAA
CGTTTGGGTAGAATTTTGAGAGCTAAAAGAAGAAATGACGAGGGATTTAATGCTTTTTTC
TATTCGTTAGTATCTAAGGACACACAGGAAATGTATTATTCCACTAAAAGACAGGCCTTT
TTGGTCGACCAAGGTTATGCCTTCAAAGTCATCACTCATCTTCATGGAATGGAGAGCTTG
CCGAACCTGGCATATTCCTCCGCTCGTGAGCGTAGAGAATTGTTACAGGATGTTCTTCTG
AAGAACGAGGATGCAGCAGGAATTGAAGCCGGTGAAGACTCTGAGAACATGATTGGAGGT
GGTGTCAGCAAGAGAGTTCGCTCTGGCGGTCAATCTTCCTCCGCAACGAGAACGACAGGA
TCGTTAGCTGGTCTTGCTGGTGGTGAAGACATGGCCTATGTCGAATACAGCAGAAACAAA
AACAAGGAACTAAAGGAGCACCACCCTTTAATCCAAAAGATGTACTACAAGAAAAAGAGA
TGA |
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Promoter Sequence
Download FASTA
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>PAS_chr1-4_0204 upstream sequence, from -1000 to -1, size 1000
GAGGTTCTATCACTTTAGACAGCGGAAGTTACAAGTTCTCCGATTAGTTGATTATCTAGA
ATTCCTACCATATGTAAAGCGTACTGTTAAACTTATAAAAGAATGCCTTTAATTGTAAGT
AAAATACACTTGACACTGAGCTATAAAGTTAAACACTAGTAACCGTCAGTAAGGTCGAAA
TTTTTTATTATGCATTACACATTTCCAATATATCAACAGAGGAAATGGCTCCCACAATTT
AATAGACAAAAGGCGAAAAAAGCACGCTTCTTTCAGACCTTTATTCGTATCTGTACAGTT
TTAACTCGTCTAATAGTTGGATCCGCCGATCTGTTCTCTATGAGCCTCAATTACATCGTT
ATCATCAAGGTCCAAGTCATCTGGAGTGTTGTCATCCAAAACACGTTGACCGTCTACCAA
AAACCTAATAGATTCTCTAGTCTTACCTTGTCTCTTGCAGAAAGCGTCCATAAGTCTTTT
CAGAGGGGTCTTTCTCTTAATCTTGAAAAAAACTTCAGAAGAACCGTCACTGACTTTTAG
ATTAATGTGTTCACTCGGTTCCTTAATATCGGGCTTGGTTTCAGTGGCTGATGGAGATTC
AGACATTGTTGTGTAACTTGTTGTGAAGAGTGATAAGACGAAATGCTAATGTCAGTGTTT
TGCCAGATCGCATTAATAGTCGCACTACAATATAATGATTACATAATTACATTACGGGGA
AGGCCAACAGTGTGTTGAAAAGTAGGTGTAAAAAAGATAGAGGTAAAAGAACGAAGTGTA
GCTTGCAAGGAGGTAAGAATCTCTGGCTCATCATTGGATGGGATATAGTTTCAATTGATG
CTACAAGTAGAGATCATGCTATTCCCGTCCACTATTTTCCTCTTACTAATCAGCATCACT
CTAATTGGTACACTACCATTATTATTCAACTCCTAGAACAATATGTAGGAACTCTGTCTC
CTCTTTACTTGCCACTGAGTTTTACTTTAAGAGAAATTCA
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| Chr coordinates |
Chr chromosome 1 from complement(1776374..1778836) |
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