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Locus Information
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| Standard Name |
Uncharacterized |
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| Systematic Name |
PAS_chr1-4_0245 |
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| Alias |
PP7435_Chr1-1025 |
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| Strain |
GS115 |
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| Description |
Component of the core form of RNA polymerase transcription factor TFIIH |
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| External sources |
Open in GenBank 
Open in KEGG
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Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr1-4_0245 size 1344
ATGAACGATTCGGACGATGATTACTTGGAGGTGGATGAGGGCATAGAGGAGAACGATCTT
TCCTTTGATAAAAAAGGTGTGGCCCGCCGAACCCGTAAGGAAAATCAAAAACAGAAAACC
ACCGCTAATATTGCACTCAAAGGTTCCAATGGGGGATACTCATGGGAGGATGAGTATCAT
AGATCCTGGGACATTGTGCAAGAGGATGAAGCAGGGTCACTGGAAGGAATCGTAACTGGC
ATTATGGAGGCTCACAAGAAGCGATTTCTGAAGAATGTAACACCTTTTCAAAGAGGTATC
ATACGATCAATGGTGTTGGTAATTGACTTCAGTAAAGTCATGAGTGAAAAGGATCTACGA
CCTAATAGAGCGGCTCTCACGATTAGCAACGCAATAGAATTTGTCAACAACTTTTTCGAC
CAAAATCCAATATCACAGTTAGGAATAGTGCTCATGAGAAATGGAATAGCAACTTTAGTC
AGCGAAGTCAGTGGTAACCCAAACAATCATGTCGAAGCTTTAAGAAGTATAAGAAGATTG
GAACCAACAGGAGATCCTTCATTGCAGAATGCTTTTGAGATGGCCCGAGGTCTTCTACTA
CATACCCCGTCCCACTCAACTCGAGAAATTTTGATGATCTTTGGTGCTCTGTTCACATCT
GACCCAGGAGATATACATACAACGATAGACTCTCTCGTAAAAGAGAAAATAAGAGTGAAA
ATTATAGGGCTTACGGCCCAGGTGGCAATTTGTAAAGAGATCTGTCGAAGAACTAATTAT
GGAGATGATACTCTTTACGCAGTGATTCTGAATGAGGGCCACTTCAAAGACCTCTTATTA
GATGCAGTGACTCCATTAGCCATCTCTAAAAGTGCCCAGGTAGAAATGCGTGGCTTCACT
TTGATCAAGGCAGGCTTTCCAACTCGAATTTCGGAAGCAATACCCTCATTCTGTGCTTGC
CATTCAAAATTGATACATGGAGGATATATTTGTCCTGGCTGCAAATCCAAAGTCTGCATG
TTGCCAACAGTATGCCCCTGTTGCAACCTGATGTTAATTCTCTCTACCCACTTGGCAAGA
TCATACCATCACCTTTTTCCTCTTAAGTTATTTCAAGAAGTTCCTCTAGCTGAAAGCTAC
ATCTCTACAAACTGCTTCAGTTGTCTTACCGAATTTCCGCAAGGAATGAGTGAATCAGAG
CGATCCAACTCAGACAACAGAGCCAAAAAAGAGTTCCATACTAGTTCAAGATACCAGTGT
CCTGACTGTAATAAGCATTTCTGTGTTGATTGCGATGTTTTTGTACATGATGTACTACAC
AACTGTCCCGGATGTGGCTGCTGA |
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Promoter Sequence
Download FASTA
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>PAS_chr1-4_0245 upstream sequence, from -1000 to -1, size 1000
TCCCAAAAAATCACTTGAAGAAATAGGTTCCTCTCGGAACGTTGTGGAAAGATTCTTTGC
AAACGAGGAAGAGGAAGCACATAGTCCTTATAAACCATCGTTGGAGGCCATCAACGATTC
CATGACCTATGCAGTGACAGAGCTTGTTGTTTCATTACTTACAGTTGCACTATTTGTCAA
TAGTGCTATTTTGATTGTAGCAGGTTCCACATTAACCGACAAGGAAATCACCAGTGACGA
CGCAGCAGATCTTTTCACTATATATGAACTATTATCAGAGCATTTAACCAAGACTGCTGG
GCTAGTATTTGCATTGGCTTTGTTATTCTCTGGCCAAAGTGCTGGAATAACGTGTACCTT
AGCAGGTCAGATGGTTTGTGAGGGATTTCTTCGTTGGAATATGCACCCAGCTGCCCGACG
ACTAATAGTAAGAGGCATCGCAATTGCCCCTTGCCTTCTACTGGTGCTTGTAAGCGGCAG
AGAAGGACTATCCAGTGCTTTGAATATGTCTCAAGTTGTTCTTTCGTTTTTATTGCCTCC
ATTAGCTGCACCATTAATTTGGTTTACCTGTAACAAGAACATAATGAAAGTTCCTATATT
TGACAGGAATGCCCCAGAGGAATCCATAGAATTACAAAACTTGTCGTCTTCAGAAAGACT
AAATCAGAACCCTGAGCTATCTGGCTCTACAGATCACATCGCCTACAAAGACATGAGTAA
TGGCGTACTAACCTCAGCGACCGCTGTTTCAATTTGGGTGGTAATCAGTTTCTTGAACAT
GTTTCTTCTGGCAAACTTGCTTTGGGGTAGCGGAACTATTTAGCCCATTAGACACGCTTA
TGTTAATAATATTAGATACTGAAAATTGTCTGGACGGTACTTTTGTAGGCGGGATCTTTG
TTCATGAACCCTCTGGCCTGCCCTCGAATATCTAGTTTTCTCATCGCCTTATTCTGTCTG
GGCAAGTAAGTGTGCAATACATATCATTCCGCTCCACTCA
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| Chr coordinates |
Chr chromosome 1 from complement(1846957..1848300) |
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