|
|
Locus Information
|
|
| Standard Name |
Uncharacterized |
|---|
| Systematic Name |
PAS_chr2-2_0314 |
|---|
| Alias |
PP7435_Chr2-0334 |
|---|
| Strain |
GS115 |
|---|
| Description |
Glycerophosphocholine (GroPCho) phosphodiesterase |
|---|
| External sources |
Open in GenBank 
Open in KEGG
|
|---|
|
Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr2-2_0314 size 3789
ATGAAGTTTGGCAAGACCTTTATAGGTCATCAGATACCAGAGTGGTCTGGTGCCTATATG
AACTATAAAGGCCTTAAGAAGCAAATAAAACGTATCAGCTTTGAATTACAGCAATTGAGA
TCTCAGGAAGTCGATTCGGTTGGTTTACTCAAAAACGAAACTATCAAAACGCATTTGGCC
AAGTTCTTTTTTGATCTGGATAGGAATATTGAAAATGTTGACGACTTTTTTAACAAGCAG
TATTCTGAGTATGAGAGAAGATTAAAAAAAATCATTTCCATTATTAGCGTCTTTTCTGAT
AGTCAAAACCAAAATATCGAAGAGGAAGAGCTAGACGAACTTTTGAACGTACTCATTAGT
TTGAGATCTGACTTTCGTAATCTTAAATGGTATGGTGAGCTCAACAAGAGAGGATTTGTG
AAAATTCTTAAGAAACTGGATAAGAAGGTAGGAACTACCTGTCAAAGCCAGTTTTTGAAC
TCTAGAGTCTATCCTCTGTCATTTGCCAACGAATTTGATATTCTTCGTCATTTGAATACC
ATAAATAAATATTTGACTGAGTATGGTCCTTGCTTAGAAAAGTTGTCTCCCTCAAGTGCT
ACAAGTTTAAAGATGGATTTGAAAGATCTGTCCATTGACACAGTCTTAAAGCAACAATCG
AAAGAAAAGCAGAGTGCTTTGAATGCATTGGACATTTACGTATCCTACATTGAAAATGAT
GATTCTGAAGGTCTTAAGAGACGATTAATCAAAGAGAATCAGTCGTTTGACAGAATTCCG
ATGAAGTTACTAATCTCTTTGCTCAATAAAGCTGCCTTGAAGACTAAATACAAATGCATC
GATTTGATCATTGTCGCTATTCCGATACTGGGTGACAAATCCGATATCAGTGGTCGTAAT
TTCTTTCACCACCATGTCATTGCATTGGGAAAACAATATGCTAAAGCTTCGGAATTGCGC
AAGGAAATGAAGAAACAGCACTTATCATTCCAACCTGCTATGACTCCCGACGAAATCCAT
CAAAGTCGACGTCTTGGATCTTTTGGACCGGATGGTATCAACTCCAATGATTCCCCCAAT
GGATTACTTTACATCTTTCAAAAAATCCCAGAACACTTGAAGTTCGGCATTTTACAGAGG
GATAATTATAAGAGAACACCTTTGCATTATGCTGCGCAGTACGGGCTGAGAGAAGTGACC
AATATTATTGTACAGTGTCTTAAAAGGTGGGGAATGTGGCTCGATAATGTTTCAATCGAT
GATATATCGGTCTGGGGGGATTCAGACCATTTGACCCCGTTACATCTATCAGTTTTAGGC
AAGCACCCATTGACATCAGAAGTTTTAGTGAATGCAATGGGGGAAAATGTGCCCCTTGCC
TGTCCCAAACTTCTGCTTATAGCCTCAAGATTAAGTTCCCCTCCATTAATGAAGCTTCTT
CTGAGTTGTCAAGGGATTAACATTGATTTTCAGAATCCTGAGAATAACGAGACGGCATTA
TACATTGCTTGCCATTTGAATCTCTTGACACAGAAATTGGTGAATCAAGTTTTGGGTGGG
ACTCCTTTGTTTATTGCTGCATCTGAAGGGCTGGAAGATATTGTGAAGCTTTTGATCAGC
TATGGAGCAAAAATTGATGTTGTGGATGACAGTGGGTGGACTCCAAGAGAACACGCCTGC
TTGAGAGGCCATCCATCTCTTGCTCCAATTTTAACCCCAGCGGATTACGATCCTTTCGAA
GAAATCAAGAGGGAGAAGGAGAAGGACAAACTAAGAGAGAAAGAAAATGAAAAATTCAAG
GAAGGGGACGTCGAAAAACTGAGACTTGGCTCTGAATCAGAAGGAACAATATCTCCCCAG
AGTTCTACTCATAGCATTTTTGCCCCAGGATCCCCACTACCCGTTAGACCTTCGGAAGCT
CCAGGAATCTATGACTTGGAATTGACAAGTACTTCAAGTATAGACGTTCTCCCAGATCGA
AATAATTCTACTAGCAGGGCTGAAAATAGAACAACCAGTCTCAATGACGAGACTTCTAAG
GTTTACAAGGCTTTCAAAAGCAATTTGAACCTGAAGGAACGAAGTAAACAATCACCATCA
CCAGTTCCAATAAAGTCATTTGGACATATGTACTTAAACCCTGATGAAGCAATCGTTCTC
ATAACTCTAGGAACAACGGATTTGCGGGATACCCATGAAGCAATTGACTTGAAAAGAGTG
CCGATCTCTAAGGCTTATGCGACGGAACTGGATACGGCTTTGTCGGTTGTAATTAGACCA
CCTGAGAGACTTTCTCATGAGAATCATCCTGTTGTCCTAGATCTTCCACTGGATGATACT
CATGGAAGCGCTACAGATCCAATTACATTTAAGTGTTCGAAGCAGGAAGCAGAGAATATG
ATTATTTACTTTGACATTGTACCTACCTATTCTTTTGATATGAATAGAAACAGAGATGCC
TTTTATATTGATTATAAGCAGCACGAGAATGGTTCAGAAGCAAATAAACACCAGCACCCG
GACAAGAAGGTTTTAGGAAGAGCAGTCGCTTTACTATCAAGTGCTTATACTTCTGTTGGA
ACAAATTATAGATCTTTGAACAACGTTATTACCGTTCCAATTCTAGAGTCTGATTCTCTA
GAGGTCTTGGGATCAGTAAGGTTCGAGTACAAACTTGTGAATGCTTTTACTCACCCAAAA
CTCACATTTGATAGAACCGAAACGTACTGGAAGTCATTAGTATCTACCAGGCTTATTGGT
CACAGGGGGTTGGGAAAGAATAGCAATAGCCGCAACTCGCTACAACTCGGAGAAAACACA
GTGGAATCATTTATTGCGGCCGCTTCATTGGGTGCGTCATATGTGGAGTTTGATGTTCAA
TTGACAAAGGACAATATACCTGTAGTCTATCATGATTTCCTGGTTGCAGAAACTGGGCTT
GATGTTCCAATGTATGAGCTGACAGCTGAGCAATTCCTGGGATTGAACCAACCCCATGGA
TTATTCCGCAAGAGTAATGATAGAGGCGAAACTCTTGATGACAATGTTCTGTTAAAGTCA
AGAAATAATTTGAGCAGGCGAGGTAGGGCCATGTCTTCTGTCGATGCTGGCATCCTTTCA
CACAGATCCAAATCAAGTGAAAACGAAGACTTGGAGCAGACTTGGAAAGCCAACAAGTTC
AAAGGTAACAGTAGAGGAACTTCGATCGCTTCACCATTTGTCACTTTGGAGCAACTATTT
AAAAAATTGCCAAAAAACGTTGGATTCAATATTGAATGTAAGTATCCAATGCTGGACGAA
GCCCAAGAGGAAGAGATGAGTCTGATTTTCCATGATCTAAATCATTGGGTTGACACAGTT
TTAAAGGTTGTTTACGAGAACGCTGAAGGAAGGGATATTATTTTCTCCTCATTTCACCCT
GATATCTGTATTCTTTTATCTCTGAAACAGCCTTCTATCCCAATTTTGTTCCTAACCGAA
AGTGGAACACAGCAAATGGCTGATATCAGAGCTGCTTCTCTTCAAAGCGCTATCAGGTTT
GCAAGAAAATGGAACCTTTTGGGCATAGTATCTGCTTCTGAGACAATTATCCGGGCACCT
AGATTAGCGGCCGTTGTCAAAGCTTCTGGATTAGTTTGCGTTACTTATGGAGTAATGAAC
AACGAACCCGCCAATGCCAATCTGCAAGTGAAAGCAGGAGTTGATGCTGTTATTGTAGAT
AGTGTTCTTGCTGTTCGTGAAGGACTACGAAATCGTGAGAACGAGGAACAACAAGCTGAA
GATGTATAG |
|---|
Promoter Sequence
Download FASTA
|
>PAS_chr2-2_0314 upstream sequence, from -1000 to -1, size 1000
ACGGAGGAGGAAATTGATCAACTTTCTGTACAGCTGAACAAACTATCAATACCAGAGCTT
GAAGACCGATTAGAGACGCTCCATAAAGAGGGTTATCATCCCGAAGTTTGCTTCATTGAT
ACAGGATTGGTAACAGAACTTAATGAAACAGATAGAATAAATTTCATTGAACTATTTAAT
GCCCTCAGCGAATTCGATGGATACAAGGCCGGCGAACTGATGATTGAACGATCACGAACC
CCAGAAACTGCAATAAATAAAGAAATATTTGCTCTCAAAGTTGAAAAGTTGGTAGACAGA
ATACGAGAACGAACTTTCACATTAGGTAGTGTATCAATTGGGGACTTGCTGGACCAAGTC
CTCGGCATGGTACGACAACATCATGTTAGAATGGAAGGAGATTTTGTCACCGTTATTGTG
GCAATTCTTTTACTTGAAGGAATTGGAAGACAGTTGGATCCAGAACTTGATCTATTTGCC
AGGTATGTATATGGTTGGACCCTTGGATTTCCTACCTATTAGACTAACCCGTTAGCTCTC
TACCAGTTCTAAGAAAACTAGGTTTCAAAGATGGTAAAATGATACTTAAGAACAAGAACA
CGGTATCTATGGTTAAAGTCTGGCTAGTCTTTGAAGTGCGACAGTTTATACACGCTTCGG
TTCAAGATGTAAGTACAAAATTATTCCCGAAAAAAGTTGACCCTGTTACTAACGATAATA
AGATCTACAACCTTGTTAAATCTGACGGATTATCTCCCAACTATTAGACGGCAATTTAGC
TAGACGAAGCAGTTATTATAGATCATAGTAGATTACTCAAGATTAGCTCAGATCGGATCG
CGGAGACACAACACATGCTAACGGCTACCGATTACGTAAGCGACATTATCCAGCCCCACA
TGCTTCTCACGTGCTCTTCTCTATGCAAGAATATAAACCCCAAACCCCAAGGCCTACCTT
TCACAGAAGAAGCCACCACTAGGCACGTTTCCTATACGGC
|
|---|
| Chr coordinates |
Chr chromosome 2 from join(1783905..1785432,1785467..1787096,1787150..1787780) |
|---|
|
|
|
|
