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Locus Information
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| Standard Name |
Uncharacterized |
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| Systematic Name |
PAS_chr3_0065 |
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| Alias |
PP7435_Chr3-1177 |
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| Strain |
GS115 |
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| Description |
RNA binding protein with preference for single stranded tracts of U's involved in synthesis of both |
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| External sources |
Open in GenBank 
Open in KEGG
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Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr3_0065 size 5085
ATGGCTGTAACTCAAAAAAGAAAGTGGAAGGATACAGAGCCAAAGGATGACATGTCCCCT
GTGTCTGCAGCCGCAAGGAGCTCCATCCTCAACCCTAGCGAAGTCGTCTTTCCAAGAGGT
GGAGGCTCAGTACTGACGCCGTTGGAGAGAAAGGAGATCTCTAACAGAGTCACTGCTGAT
GTACTATTCGAAAAGGAGACTGCCAAGGAATCTTCTTTCAAGTCTACAGATGCAACCAAG
AAACGTAAGACCACAGCAACCACAGTAATTAACCCAGCTCCTACTGTTTCGGGAACTATC
TATGACCAAAAGGATGATTCAAACACCACCACTACCAGCATGACACTTAAAAACCTAATT
CCGGGAAGTGTGGTGTTAGGTCAAGTCATCTCGATCCAAAAACTAGGTATGCAATTAGGT
TTACCCGGAAACATCAGAGGTTACGTTCCCATAACTTCTGTGAGCAAACAGATTACCCAA
CAGTTAGAGGCCCTAGAACAAGATTCTGACGATGAAGATGCCAGCAGTTCACCACAATTA
TCTGAAAAGGTCTTTCCCGAGTTGAGCAAGATTTTCCAGTTAGGACAATGGTTGAGAGCT
GTGGTTCTAGAAGAATCTTCAGTTCCATCTGAACACAAGCATAAGATTCAACTTAGTGTT
GAACCAGAGAAAGTTAATGCTCACTTAGAGGATGACGATTTGGTTCCAGGAGGTGTGCTC
CAGGTTGCAGTCAATTCTGTCCAAGACCATGGATGTATCGTCGACACAGGAAAGAAAATT
CCCGGATTCATCTTCAGTAAATCATTCAAGAACAGTGGTATTGACATGGAAACTGATTTA
AAACCTGGATTTGTGCTCTTGGCTACAATTTCAAAGTCAAACAACAAGAACACCATCACA
CTGACACTCCCCTCAATGAACAACAAAGACAATGGATCTACTTTATCAACTGCTACATCT
GTCGATGCGGTTTTGCCAGGTGTGATGGTCAATGCACATATTTTAGACATTACAGAAGAA
GGCATTTTTTGTAGAGTTCTTGGATTGTTACCCGGAAGAATACCATTGGCTCATTTAAAG
CTTTTCAATGTTCCAGAAATTAGAGAGACATATAAGATCGGTTCCACTATAAAGTCTAGA
GTTGTTGGTGTTCTGGAATATGAAGGTTCAAAATCTTTAACTTTATCAACTATACCATCC
ATATTAGAATTGGATTCTACTTATGATGAATCTCCCCTTGAATCGTTCCCTTTTGGCTTC
ACTTTCGAGTCGGTTAAAATAGTTGGTAAAGATTCTAATAACGTTTATCTTGAGCTCAAC
GAAGACACATATGGACAAGTACACCTTTCCAAACTGAATAAGGAAGTTAGCATTGATTCA
TTTTATAAGGTCGGTTCCACTCACCACAAAGCTCGAGTGATTGGCTACTCACCAGTTGAC
AAGGTATTTGTCCTGACCATGGACCCACGCCAGTTGGAAGCAAAGTTCTTGAATATTCAA
GATATTCCTATTGGTGAAATCGTGACTGGAGTAGTCACCAAGGTTCATAGTCACGGGCTT
AATATCAAGATATTTGATCAGTTTGAAGCACAGGTTCCGTACGGACATATGAGCGATGTC
ATGCTTACTTATCCGGAGATGAAATTTAAGATAGGTACCAAAGTCAAAGGTAGAGTCTTA
AAGTTTTACAGAGGAAATCTTTGTGTCACTTTAAAGAAATCTCTCCTTAGATCAGAAAGA
GACGAACTTATTTTCACATACGAAGACGTTGTACCTAACAAACGTACCTTTGCCACCGTT
GAGAAGTTTTTCCCAACCGGTGTTCTCATGTCATTTTTCAACAATATTTCTGGTTTCCTT
CCGAAGACTGAAATCAGCGAGGCTTACGTTAACAGGCCGGAGGATCACCTAAAGCTTTTC
CAAACAATATCTGTCAGAATTGATAGTATTGATCCTGCTACAAACAAGTTCAGGGTTTCT
TGTTTGCTCTCTAAAGATCTGTCAGAGGAACAGGAGAAAAAGATTTCAACTTTCATCCCC
GGGTCTTCTATTTTGGAGGTATACATCGTCGAAAAAATGAAAGATGCTATGATTGTCGAG
GTGAAAGATTCAAATGTTCGTGGTGTTATCCAAGAAGGTCAACTCTCTGATGGAGATCAA
AACCAAAACAAGACCCTGCTCAGAACCGCTGTTGTTGGTTCCAGTTTGGAAGCTCTTTTC
TTGCACAGAGATCCTAAAAGTCGTACTATTAATTTCACTGCTAAAGACTCTTTGATTAGA
GCTTCCAAATCAGGTCAGCTTCCTGCCTCGTTCGAAGAGCTTCCTGCTGTGGGAGAAATT
GTTTACGGATATGTCCATACCATTACTAATGCGGGCTTGTTTATTGAGTTTGCTGATGGT
TTGAGTGGGTTTGCTCGCACCAAGGACATTACTGACGAACCTTCTGATAAGCTTCCTTCA
TTGTATTTCAAGAACCAATCCGTAAGGGCTAGGATACTGAAGTTAGATGATGAGTTCCGT
AAATTCCGCCTCACATTGAAAGATATCGATCATCAGATTGTTGCTGCTACTAACCCAGTT
GACAAGTCTATTACTAATTTGAATGAATTTGTTCCAGGAAAAATCACGAAGGCAAAAATT
AAGTCTGTAACACCAACTCAACTCACTGTAGAACTGGCGGAAAACCAGTTGGGTCGAATT
GATGTTAGTCAGGTGTTTGACAGTTTGTTAGAAATAAAGGACACCAAGAAGCCCCTTTCG
TCATTCAAGGAAGGTGCAGAATTAAAAGTGAAGGTGATTGGGTACCAAAATAAAGATTCC
AGTTTCACATCTGTTGCCTTCCGTGATTGGGGCGACATTTTAGTTGAATTGTCCATTAAG
AAATCTGAGTTAGAAGAGGAAGGAAAGGTTAATGTTCTTTCCTTGACGCAAATCACACCA
GGTACGAAATGGCTGGGATTTGTCACTAGATATGCTAGAGGATTTTGGTGGGTCAGTGTT
TCCCCAAAGTTCAGAACAAAGTTGTCATTAATGGATCTTTCCAAATCTGGTTCTGTTGAA
GAGTTAGAGAAGGCTTACCCATTAGGTTCTGCTATTGAAGTGACTGCCAAACAGATTATT
GGAAACAAAGCAGTGGAAGTGTTTTCTAAAGAGAACAGAATTGAAACTATAAACGATGTT
AAAGTTGGCGACAAGCTTCCATGTCGTATTATTTCTCTTTCTCATGACTATGTCACAGTC
GAACTCAGTGACAAAGTCAAAGCTAAGTCTTTCATCACTGAAGCCTTAGATGACTATTCT
GAGAGTCTAGAGTCTACTTTTTCTACCAACGATATTTGTACAGCCACTGTGCTATCCGTT
GATGATACTACGAGGCAGATTTTTGTATCTCTTCGATCCGAAAATGCCAAGGACAAGCTG
ATTGAAAGTTTCGAAGATGTAAAGCGAGGGGATATTGTTCGTGGTTTCATAACACGTATC
AGCAATTTTGGTGTTTACGTTTCCTTAGGAAGGACTGTTTTTGCATTGGTTAGAGTTACT
GACATCTCTGATTTGTTCCTAACTGACTGGAAAAAACACGTCAAGCTTAACCAATTTGTT
ACAGGCAAGATTGTGGATGCTGGTGAAGAGCGCCGTATTTTAATGACATTGAAAGAAAGT
CAAGTGGGTCAAGGAACTGGTGCCTTGCATCAATTTGATGATTTGAAAGTCGGTGACGTC
TATGAGGGTACAATCAAGAAGATAATGGACTTTGGTGTCTTTATTACTTTAGATGGTGTT
CATAGCGTCGACGGTTTATGTCACCGCTCGCAGATTTCCGATAGCAAGATTGAGAACTTT
GAGTCTCTTTTTAACCAAGGCGATAGAGTTAAAGTTAAAATTCTGGATATTAACCGCAAT
AAAAAACAGTTGTCTTTGGGTATGAAGGCGTCTTACTTTGCTAATAGAGACGATGAAGAA
GAGGCCGATCAGTTAAGAGCTGAAACGGATGACTCAGTTGACTCTGATAGTGACGACCAA
ATGATGGAAAATATATTCGAAACAAGACAACAGGACAGCGATGACGAGCCAGATGTAGAC
ATCGACACCGAATCTCCTAAGAAGATTGCCAGTGGACTTTCTACAAACGGGTTTGACTGG
ACAGCTTCTATTCTGGATCAAGCCGAAGATGACGAGTCATCATCTTCAGATGAAGAAGAC
TTTACTAAGAAAAAGGATAAGAAGAATAGGAAAACAAAGGCTTCAATTGCCGAGGACAAG
AGCGCTACTCTCAATACACGAACTCCTCAGTCCGTTTCAGATTTTGAGAGATTGCTTATC
GGTAACCCTGACTCTTCCATCCTGTGGATGAACTACATGTCATTTCAATTACAATTGAGC
GAAATCGAAAAAGCTCGTGAAATTGCAGAGCGGGCCCTAAAGATCATAAATTACCGTGAA
GAACAGGAAAAGATGAATATCTGGATTGCATTATTGAATTTGGAAAACACATTTGGAACT
GATGACACCTTGGAAGAAGTGTTTAAACGTGCTTGTCAATACATGGATTCATACGTGATG
CACCAGAAGCTGGTTGGCATCTTTGCACTTTCTGAAAAATGGGAAAAGTGCGAAGAGATC
TATACCGTGATGACCAAGAAGTTTGGTAGAAATGTTACAACTTGGGTGTCATACGGTGCT
TTCTTATTAGAGCGTGGTAACCCTGACGAGGCTCGTCAAGTACTTGGGCGTGCTCTAAAA
GTCCTTCCCAAGGCCGACCACATCGAGGTGGTTAGAAAGTTCGCTCAACTAGAGTTTGCC
CATGGTGATGCAGAGCAAGGCCGTTCATTGTTTGAGGGATTGTTAGCTGATGTTCCCAAG
AGAATCGACCTATGGAACGTTTACATAGATCAAGAAATCAAGATTAACGAGAAGAAGAAG
GTTGAAGATCTATTTGAGCGTGTTATCACCAAGAAACTGACTCGTAAACAAGCCAGATTC
TTCTTCGGTAAATGGCTAGAATTTGAGGAAAAGCAAAAGGACGTCAAAGCAGCCGACTAT
GTCAAGGCACAGGCTTCTGATTACGTGCAAAAGCACCAAAAATAG |
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Promoter Sequence
Download FASTA
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>PAS_chr3_0065 upstream sequence, from -1000 to -1, size 1000
ATCCTGGGCTTAGAAGTGGAGTTGACAGAAATCACGGCGCAACTGCACTAAAAATGTCAC
GAACAATTGTTACATCACCTTCGTATGCCGCACTTGCCTTTGACACGCTGATAGCAGCTC
TTTACGAACGCGATCCAGCTCCAGTTGTTTTCCTCCTGAAGGATCAATTGCGCAGTGCCA
ATTCCTCATCCGGTTTTAAGCCGCCTCAGGAGCTGACTAAGTTTAGCCTTGCCGATTACA
AAAGAGCCACACGAACCGGGACGTCAAGCGCACCCGAGCCTGACACTCCGCTGTTTGTCA
CTTGGAATTTACGCCACAATGATAAAGCAACATTACCCACAACTGAGGAAGACAGCAAGG
AACTGAGAGGCTGTATCGGTAACTTTTCCTCCTTACCTTTGGAGGAAGGTATCAGGGAAT
ACGCTTTAATTGCGGCTTTTGAAGACCCCAGATTTCCCCCCATAACTTCAAGCGAACTTT
CCCGGCTGGAATGTAGTATCACTTTGCTGAAGGACTTTGAACTCATTGATGATCCACTGA
ATTGGGAAATTGGCAAGCATGGACTCAGGATCTCAATCCAGTCCCCCTTCTCATCACGAC
GACTATCATCGACGTTTCTGCCTGATGTCGCTCCTGAGCAAGGATGGACTAAAGATGACA
CATTGGAACATCTTCTTCTGAAGGCTGGAGTCCCTGCTGGCAGTGGCTCTTGGGAAGACT
TCCACAATTCCAACAAACTTCAAGTTACGAGATACAAAGGAGTCAAGTCAAAGATATCTT
TACCTGACTACCTGACTTTACGTGGTCAGTTGGAAGATTCAATTAGCAGCGCTTAATTAA
CAACTATTTCCCAATATGGAGTTGATCAAGCATTTCGCTCTCAATTGGGAAACCTCGATT
TTACTTAGCAAATTTTTTTTTTCTTTCTTTCTCTTCTCATCACCTACAAACTCTAGCATT
TTCTACTACTCAAAAGACCAAGAGGTTACTAGATCCTAAT
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| Chr coordinates |
Chr chromosome 3 from complement(137836..142920) |
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