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Locus Information
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| Standard Name |
Uncharacterized |
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| Systematic Name |
PAS_chr3_0344 |
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| Alias |
PP7435_Chr3-2381 |
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| Strain |
GS115 |
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| Description |
Essential DEAH-box ATP-dependent RNA helicase specific to the U3 snoRNP |
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| External sources |
Open in GenBank 
Open in KEGG
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Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr3_0344 size 3813
ATGGGTAAATACAGAAAGAGATTCAATGAAAAGGCCCGTTCAGGAATGCTTCTGAAGCAG
GCTACTCTTAAACGAGCTAGAAACAAGCAGTTTTTCAGACAGCCTGACGAAATTCCTGAA
GATTCTCCGGATCAAAATGAATCCAAAGATGAGATTGTAGATACCAATGCTGAGTATCTA
AAACCGGAAACTGACAAAGAGAAAGAAGAACGTAAAAGACAAATGCATGAGATGTTATTT
GAGCAACACAAAGAATCCAAAGTATCAAGAAACAAGAGAAAGAGAATGGAAAAGTATATT
GATCACCAGTTGAAAAGAGAAGAAAAGCAGATCTTGCTTCAAAAGTTACAAGAAACAAAA
TTCGACACGTCTTTGCTTCAATCTTCTAAAAGACTTGGATCCAGCAAGCTAACCCGTAAA
GAGGAGATAGTCGAAGCTCTATCACTCGAGAAACAAGGTAGAGGTAATGATAGAACTAAT
GACATACTTTACGAAGAACGAGAGGTGAAACAATGGGATGAAATTAATGATGGTGACGAC
ATATCAGAGGACTCTGGAAAAGATGAAAAAGAGGATATGGCTGCGGCTCGTGTGTCAGGT
TTCATAGATCATAGGCCGACTGCACTCGGAGGAACAGGTTCTGGATTCTCTTTTCAAAAT
ATCCCCAAAGTAGCCAAGCGAAAGAATGAGGTAATCAAAAAATACAACTGGAGACAAAGA
CTTGAGGAAGAAGAAAGTAAGAAAAAGAGACAGGAGCTGGAAAATGATTTTCATGATTCT
GATGAGGATGGAAATGAAAATGAGAACGATTCTGAAGTCCCTGATGAGGCAAGTGAAAGT
TCTCAACCCGACGGTTCAGGTCTAGATGACGAAGATGACGATTTCCGAGGATTTTCTGAC
AATAGTGACAACGAGAATGGCTTTGACCAAGATAATGCCATCGAGAATTTAGAGGATACC
TCCGATTCAGATTCTTCCACTTCAGAGGATTCCCAACACTCATCTTTTGAAGAAGATTCG
GATCAAACAGAAATCCCGACTTCTTCAAGGGGAAAATCTTTCAAAGACTGGGCAGAAAGC
CAGCTTAAAGAAATTAATGGTGAAGCAAACATTATCCAGACTGAACTTCCTCACAGAGAT
TACACTCCATTGGATAGACCAGAAGACAAAGAAGACGATTTAGAAGATTCGTATATTCCT
ATCGATGGAAATAACAAAAGGAAAGTGTTCTATGTAACCGTCAACAGATCTGAAACCATT
CAGAACATTAGATCAAAGTTACCAGTTTTCGGTGAAGAATATAGAATCATGGAAGCAATC
CACAATAATGATTGTGTCGTCATCTGTGGTGAGACAGGTTCCGGTAAAACCACACAAGTG
CCACAATTTCTCTATGAATCAGGTTATGGACATCCTGACTCTGAAACGCCTGGTATGATT
GGTATTACCCAACCAAGAAGAGTTGCGGCGGTATCCATGGCAGAAAGAGTCGGTACAGAA
TTAGGAGATCATGGATCTAAAGTTGGTTATCAAATCCGATTTGATGCTACGATTAAAGAG
GACACCGCTGTGAAGTTTATGACTGACGGTGTGTTGTTAAGAGAGATGATGAACGATTTC
CTTTTGTTGAAGTATTCTGCTATCATTATTGATGAGGCTCATGAAAGAAATATCAATACC
GATATCTTGATTGGTATGCTTAGTCGTATTTTGAAGCTTAGAGCAAAGTATCATGAGCAG
GACCCTTCTAAATTCAAGAAATTGAAGTTGATCATTATGTCTGCTACATTACGAGTTTCA
GACTTCAGTGAAAACAGGGTTCTTTTTGAAGTTCCTCCTCCAATTCTTAAAGTCGATGCT
AGACAATTTCCGGTTTCCATTCATTTCAACCGTCGTACTGCTTTCAATTACGTTGAAGAA
GCGGTGAGAAAAAGTATAAAGATCCACAAGAATCTACCCAAAGGAGGAATTCTTATTTTC
TTAACCGGACAAAACGAGATTAACCAGGTTGTTAAAAAGTTAAGAAATCAATTTCCTACA
GGAAATAGCCAAGAAAGCGTTCCTCAAGTGGCTGTCCACCCTGAAAATGCAGTCGTGGAA
CCGGAAGAAGTTGATTTAGACGTGAATATCGCTGAAATGGAGGATGATTACGATTCAGAA
GGAGACAGAGAAGAGGGTGAAGAGGAAGGATTCACTGAAGAACTGGAAGAAGACCAAACC
TCTAACGACCCCCTTTACGTGTTGCCATTATACTCACTTTTGCCTACAAGGGAACAAATG
AAGGTCTTCAAAGCACCACCTAACGGTGCTAGATTGTGTGTGGTTGCTACTAACGTAGCA
GAAACATCCTTAACCATCCCTGGTATCAGATATGTGGTGGACTGTGGACGCTCCAAAGAG
AGACGATTCAACGAAGACACTGGAGTTCAAAGTTTTGAAGTTGATTGGATTTCCAAAGCC
AGTGCTGACCAGAGAAGCGGTAGAGCTGGAAGAACTGGGCCAGGTCACTGCTATAGACTG
TACTCATCAGCTGTGTACGAAAATGATTTCCCCCAGTTTTCTATTCCTGAAATATTGAGA
ATGCCAATTGAGAGCGTTGTGCTGAGTATGAAAAGTATTGGTATTGATAATATCGTAAAC
TTTCCATTTCCCACACCTCCTGATAGAAACGCACTATCCAGCGCTGAAAAACTGCTCTGG
TATTTGGGTGCTTTGACTAGAGATAAGAAGATCACCTCACTAGGAAAGACTATTAATTTT
TTCCCACTTAGCCCAAGATACTCTAAGGTGCTGATAACAGGGAACCAACACGGATGTTTA
CCATACCTGATTGCAATTATGTCCGCATTGTCCGTCGGAGATCCATTCTTATATGAACAC
GAGCTTGGAATTGATAGCAGAATTCAGCAGAAGGATGAAGACGACGATAGTAGTGACAGT
GATGAAGATACAAAAAAAGAACGACCAGTTAGAGAATCTGTGGAAGATATTGAAGCACGA
CGAAACTTGAGAAGGAAGTTTAACGAGTCTAGGAACCAATTTTCTCAGTTAGATAAAAAC
AGTGATGCCTTTAGATTGTTATCAGTTGTTTGCGCAGCTGGTCATGTACCAAGGGATAAA
CTGGGACAGTTCTACCAGGAAAACTTTGTGAGGCCTAAAATAATGGAAGAAATCGAAAAG
TTGCGGAAGCAGATCACACATATCGTAAAGGTTAACACTAGCAAGGACAGAATTGGCATA
GTTGAAGAGGTAGATCTCAAATTGGGAGTTCCTACAAAGGTGCAAATTGCAGCGATGAAA
CAGATGATTGCATCCGGTTTCATTGATCAGATTGCCATCAGAGGAGATCTTGCATCCCAG
GATTGTTCAGTAACCAATAAAACTGCCATTATGAACATTCCATATGCAACTCTATTCCCC
TCCAAGACATATGATCAGGAGGATATTGACCAATTTGTCTACATTCACCCATCATCGATC
ATTTGCTCATCGGCCTCAGTTCCTCCAGATTACCTGGTTTATTTCTCTTTAAACTTGGGT
TCCAACCGAAGGGCTGTCAATAAACTTCGCATGAAACCTCTTGTCAACATTGCTGGCAAG
CCATTATCCAATGTGGCCAAAAGTTCTGGTCTCATCACGTTCTCAAAGCCTTTGGAATAC
CCTTACGCACCGAAATACATTACCTCACAAAAGCGAGAATGCTATGTTATCCCCAGATTT
GGAGCTTCTATTGGCTCTGGCGGGATTGGATGGGATTTACCAGCTATGAAGGTCATTCAA
GAAAAGGAGAACGGTACCTGGGTAGTTAAATAG |
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Promoter Sequence
Download FASTA
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>PAS_chr3_0344 upstream sequence, from -1000 to -1, size 1000
TAGACTCCCCAAGTACCACGTAGAAATCAAAGTTTTCTATGGAAAAATAGACTGACTTAC
TGTCCAAGAATAACTTGGCAAACAAACAAAGATTTTGACAAAGGATGGTATGCCTGTACC
CACTAACCTTCTTGATAGTGAAATTATCCTTATACATGGTCTTTCCTGGAAATCTGTAGT
TGTGCTTGCAAACAGACAGATGACTGTTCAGTAATGCCTCATCTCTGGTGTACTTGAAAC
ATAGATCACAAACATAGAGCGTATCTAGCCAGTATGAATCTGTGTCCCCATTTATCTGTG
GCTCTGAATGCTTCCTGTGATGTATTCTTTGATGGGCATTAACTGCCTCATATCCTAACA
TATCGTGGTGACCCTCCAAGAAATAAACACTATTACCGTACAAAGTATCAAACTCGTTAT
CACCGAGTCTTACCCTTCTTATGTTTCTCTTCTGTGTAACTCCGTAATAGCCTTCATTAT
CAGACATTACTTGGGCAGATGCGATGCCTAACTTTGATGGGTTCTTCTACTTTCCAAGGA
TATGTAATGCCTCGAATACTAGTCAAATGAGGGGCTAGGGAAATACTTACTAACGAGGTG
ATAATTACGTACTCTAAATAGTCTTCACGAAAAAAAGGGGAGGTAGCTATGAAATGACAA
AGAAATACAGGTAAGAGGGAGGTGTTGCTAAGTATTTAGGGGAGGTTGTCTAGCGTTCCG
ACATCTCGCAGACGATGTTCTGTCAGGCGAAGTTGGGTGTCTCTATTTGTGCGTAAACTT
GGAAATACTAGAGCGATGCTTGCTTGCCAATCTTTGTCTATGTTTAAACTGTAATCATAA
CATGCTGCGTGTCCAATAAAAAGCACGCTGCAACCTGTTGTCTGACAGAAGTTTATTTAC
TGGCATCTTGATCTTTCCATCCCTCTTTGTCATTTTCGCTAAGAAGTATTTTTTTCCTCA
TCGCTTGAACTATCTGAACTTTATCTCTATCTTTCGTATC
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| Chr coordinates |
Chr chromosome 3 from complement(675417..679229) |
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