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Locus Information
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| Standard Name |
Uncharacterized |
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| Systematic Name |
PAS_chr3_0568 |
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| Alias |
PP7435_Chr3-0638 |
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| Strain |
GS115 |
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| Description |
RNA polymerase II largest subunit B220 |
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| External sources |
Open in GenBank 
Open in KEGG
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Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr3_0568 size 5232
ATGAGTCAGTTTCCTTATTCAAGTGCCCCACTGAGGTCCGTCAAGGAAGTGCAGTTTGGC
TTGTTGTCTCCCGAGGAAATTAGAGCTATTTCAGTTGTTAAGATTGAATATCCTGAAATC
ATGGATGAGAGTCGCCAAAGACCGAGGGAAGGTGGATTAAATGATCCCAAGTTGGGTTCC
ATAGACCGTAATTTCAAATGTCAAACTTGTGGTGAGGGAATGGCAGAATGTCCCGGTCAT
TTTGGACACATGGAGCTAGCTAAGCCAGTCTTTCATATTGGTTTCATTCCGAAGATTAAA
AAAGTCTGCGAATGTATCTGTATGAACTGTGGAAAGCTTCTTCTTGACGAAACAAACCCT
ACCATGGCTCAGGCTATCCGTATTAGAGATCCAAAAAAACGATTTAACGCTGTGTGGCAG
CTGTGTAAAACTAAGATGGTATGTGAAGCTGATGCCCCTGTTGATGAGTACTCTGAACAG
AAGGTCGTCTCCAGAGGTGGATGTGGAAATACCCAGCCAGTCGTCCGTAAAGACGGTATG
AAACTTTGGGGTACATGGAAGAAGAGCGGCTTCAGCGATCGTGATGCGCAACCAGAACGT
AAACTACTAACTCCCGGTGAGATCTTGAATGTTTTCAAGCATATATCGCCTGAAGACTGT
TTTAGGCTAGGTTTCAACGAAGACTATGCGAGACCTGAATGGATGATAATCACTGTGCTT
CCTGTCCCTCCGCCCCAAGTAAGACCTTCCATCGCCATGGACGAAACCACTCAAGGACAG
GACGATTTAACACACAAACTAAGTGATATTTTGAAGGCAAATATCAATGTACAAAAACTC
GAAATGGATGGTTCCCCTCAACATATCATAAATGAGGTAGAACAATTACTTCAATTCCAT
GTAGCTACCTATATGGACAATGATATTGCAGGACAGCCACAAGCATTGCAAAAATCCGGG
AGACCTGTAAAGGCCATCCGTGCGAGATTGAAGGGTAAAGAAGGACGTTTGAGAGGTAAT
CTTATGGGAAAGCGTGTTGACTTTTCAGCACGTACTGTTATTTCCGGTGACCCTAATTTG
GAGTTGGACCAAGTTGGTGTACCCATTAGTATTGCCAAAACTCTTTCCTACCCAGAGACA
GTCACACAATACAATATTCATAGGTTGACTGAATACGTTCGTAATGGGCCGAACGAACAT
CCAGGTGCCAAATATGTTATCCGTGATAACGGTGATCGTATTGATCTCAGGTACCATAAG
CGTGCAGGTGATATAGTTCTACAGTATGGATGGAAAGTTGAGAGACACCTGATGGATGAT
GATCCTGTCCTTTTTAACCGTCAACCGTCATTACATAAAATGTCCATGATGGCACATAGA
GTCAAAGTAATGCCCTACTCTACTTTTAGACTAAATTTATCTGTTACATCACCGTACAAT
GCTGATTTCGACGGTGATGAAATGAATTTACACGTTCCACAATCTGAGGAGACCAGAGCA
GAACTGTCACAGCTTTGTGCAGTTCCCTTGCAAATCGTCTCTCCACAGTCAAACAAGCCC
GTTATGGGTATCGTCCAAGACACACTGTGTGGTGTCAGAAAAATGACGTTGAGAGACACC
TTTATTGAATACGAGCAAGTAATGAACATGTTATTCTGGGTTCCCAGTTGGGATGGTGTT
GTTCCACAGCCCGCTATCCTGAAGCCTAAACCTCTTTGGACTGGTAAACAACTACTTTCC
ATCGCTATACCAAGCGGTATCCATCTTCAAAGAACTGATGGTGGAAACTCTTTATTGTCT
CCAAAAGACAATGGTATGCTTATTGTTGATGGTAAGGTTATGTTTGGAGTTGTGGACAAG
AAAACCGTGGGATCTGGTGGTGGTGGTTTGATTCACACTGTTATGCGGGAAAAGGGTCCT
AAGATATGTGCAGAGCTCTTTGGTAACATTCAAAAAGTTGTGAACTACTGGTTATTGCAT
AACGGTTTTTCTATTGGAATTGGTGATGCGATTGCCGACGCCAGCACTATGAAGGAGATT
ACACATGCCATTTCTAGCGCCAAAGAACAAGTCCAGGAAATTATTTACAAGGCTCAACAT
AATGAACTGGAGTTGAAACCAGGTATGACTTTACGTGAGTCTTTTGAAGGAGAGGTTTCT
CGTACGCTGAATGATGCTCGTGACTCTGCAGGTCGTTCTGCTGAGATGAATCTGAAAGAT
TTGAACAATGTGAAGCAAATGGTGTCTGCAGGTTCCAAAGGATCTTTCATTAATATTGCG
CAGATGTCCGCTTGTGTTGGTCAGCAGATGGTCGAAGGTAAACGTATTGCTTTCGGTTTT
GCTGATCGTTCGTTACCGCATTTTACTAAAGATGATTTCTCACCAGAATCTAAGGGTTTT
GTGGAAAACTCCTACTTGAGAGGATTAACTCCGCAAGAGTTCTTCTTTCACGCCATGGCT
GGTCGTGAAGGTTTGATTGATACAGCTGTGAAAACTGCTGAAACAGGTTATATTCAGCGT
CGTTTAGTGAAGGCACTAGAGGATATAATGGTTCACTATGATGGTACTACGAGAAACTCA
CTAGGTGACATTATTCAGTTTCTTTATGGTGAAGATGGTCTTGATGGTACCCAAGTTGAA
AGACAAACTATTGATACCATTCCTGGAAGTGACAAGGCTTTCCACAAACGTTACTATGTT
GACTTGATGGATGAAAAGAACTCGATTAAGCCCGACGTTATTGAATATGCTGCGGACATA
CTTGGTGATGTTGAGCTACAGAAAGAATTGAACTCTGAATATGAACAATTGGTCAGTGAC
CGTAAATTCTTGAGAGAGATAGTATTTGTTAATGGAGATCACAACTGGCCTCTTCCTGTG
AACCTCCGTCGTATCATTCAAAACGCTCAACAGATCTTCCATTTAGACCGTGCGAAGGCC
AGTGACTTGACGATTCCTGAAATCATTCACGGTGTTAGAGATCTTTGTAAGAAACTATTT
GTGCTCCGTGGTGAGAATGAACTTATCAAGGAAGCACAGCAAAATGCTACATCATTATTT
CAATGTTTGGTCCGTGCTAGGTTGGCTACTCGTCGTATTTTGGAGGAGTTCAGACTGAAT
AGAGATGCTTTTGAATGGGTGCTGGGTACTATTGAAGCTCAGTTCCAGAGATCTTTGGTT
CATCCCGGTGAGATGGTTGGTGTGATTGCCGCTCAGTCGATCGGTGAACCTGCAACTCAG
ATGACGTTGAATACATTCCATTATGCAGGTGTGTCGTCTAAAAACGTTACACTTGGTGTT
CCTCGTCTGAAGGAAATTTTGAATGTTGCAAAGAATATCAAGACCCCTGCACTGACAGTG
TATCTTGATAGAGAAATAGCACTTGACATCGAGAAAGCTAAAGTTATTCAATCTTCAATC
GAATATACCACTTTGAAGAATGTGACTTCTGCCACTGAGATCTACTATGATCCAGACCCG
ACGAGCACTGTGATTGAAGAAGATTTTGATACTGTCGAGGCTTACTTCTCGATCCCCGAT
GAAAAGGTGGAAGAAACGATTGACAAGCAATCCCCATGGTTGTTACGTCTGGAACTAGAC
CGTGCAAGAATGTTAGACAAGCAATTGACGATGAATCAAGTAGCTGACAAAATTTCAGAA
GTTTTTAGTGATGATTTATTTGTCATGTGGTCTGAAGATAATGCTGACAAGTTGATCATC
CGTTGTCGTGTGATTCGTGACCCCAAGGCTATGGATGAAGAATTGGAAGCTGAGGAAGAC
CAAATGTTGAAAAGAATTGAAGCTCACATGCTTGACTTAATTGCTTTGCGTGGTATTCCA
GGAATCTCAAAGGTATACATGGTAAAACATAAGGTTTCTGTTCCAGATGAGTCTGGGGAA
TACAAAAATGAAGAACTTTGGGCTTTAGAGACTGATGGTATTAACCTCGCTGAAGTGATG
GCTGTACCTGGTGTCGACTCTTCCCGTACTTACTCGAATTCCTTTGTTGAAATTCTTTCA
GTATTGGGAATTGAGGCTACTCGTTCTTCTTTATACAAGGAGATTCTTAACGTTATTGCC
TTTGATGGTTCTTATGTCAACTATAGACATATGGCCCTATTAGTCGATGTTATGACATCA
CGTGGATACTTGATGGCTATCACTCGTCACGGTATTAACCGTGCAGACACTGGTGCCTTG
ATGAGGTGTTCGTTCGAAGAGACTGTAGAAATTTTGTTTGAGGCTGGTGCGGCTGCAGAG
TTAGATGATTGTCGTGGTGTGTCTGAAAATGTCATGCTGGGTCAACTGGCTCCAATGGGA
ACAGGTGCGTTCGATGTCATGATTGATGAGAAGTTGTTGACCAGTCTTCCAGCAGACTAT
GCCCCCACCATGCCGTTGTTCAAAGGTAAGGCAACACAAGGTTCTGCAACTCCTTATGAC
AACAATGCACAGTATGATGATGAGTTCAATCATGATGATGTGGCAGATGTTATGTTTTCT
CCAATGGCTGAAACTGGATCTGGAGATGATAGAAGTGGTGGCTTGACTGAGTATGCAGGT
ATACAGAGTCCATACCAGCCTACTTCTCCAGGACTTTCAGCTACATCACCTGGTTTTGCT
CCTACGTCACCTGGTTTTGCTCCTACTTCACCAAGATATTCCCCTACCTCACCAGGCTAC
TCACCAACTTCACCCAGTTATTCTCCTACTTCGCCTAGTTATTCACCTACATCTCCAAGT
TATTCACCTACTTCGCCAAGTTATTCGCCTACTTCTCCAAGTTATTCGCCAACTTCACCA
AGTTATTCGCCTACTTCTCCAAGTTACTCGCCAACTTCACCAAGTTATTCACCAACTTCT
CCAAGCTACTCGCCTACTTCGCCGCAGTACTCACCTACTTCACCACAGTACTCGCCTACT
TCGCCGCAGTATTCGCCTACTTCACCACAGTACTCACCAACGTCGCCGCAGTACTCGCCT
ACCTCACCGCAGTACTCGCCTACCTCACCGCAGTATTCGCCCACTTCGCCGCAGTATTCG
CCCACTTCTCCGCAGTACTCTCCTACTTCACCACAATACTCGCCAACTTCGCCACAGTAC
TCGCCAACTTCGCCACAGTACTCACCGACTTCACCGCAGTATTCCCCCACATCTCCTCAA
TACTCCCCAGCATCCCCACAGTACTCTCCTTCCCGTCATTCTCCTAACGGTGAATCAAAA
GAGGGTGAATAG |
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Promoter Sequence
Download FASTA
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>PAS_chr3_0568 upstream sequence, from -1000 to -1, size 1000
TGAAATCAAAGAATTGGGTACAAAGTATTTCAAAAATGGTGACACCAAAATCGCCTTCGA
AAAGTATCAAAAGGCTGCTAATTATTTGCTGGAATACATACCATCAGATTTATCAGAGGA
ACAGAGCTCTAAGTTGGAGCTGCTAAAAACATCTGTCTTCTCCAACGTGGCATTGGCTGG
ACTGAAAGTTTCCAAGTTCAAAGACACGATTAAGTATGCCACATTGGTCATTGAGGATGA
ATCTGCGGATGCAAAGGCCAAGTCCAAAGGCTACTACCGTAGAGGAAGTGCTTACAGCTC
ACTGAAAGACGAAGATTCAGCCATCTCAGATTTCCAGAAAGCACTTGAATTATCCCCAGG
TGATCCTGCAATTAGCCAATCTCTACAAAGAACCACGAAGGCCAGAAAAGACCGTCTTGC
CAAAGAGAAAGCTGCTTTGTCTAAGTTCTTTGAGTAGAGTCATATAAACACATAGACAAC
TAATAATTCATCCCAGCGATGGCACGTAAACATCAAGACAGGTTAGATAGTACCCGCGCA
TCCGCGTATCGTGGTTCCACCTACCGTCCCGAAGCGTCGTAGCACCTCCCCCCAACCCTG
GTGCGTAATTATCTGGCCATCTCCGTAATTTCGCGCCCCTCTCTTTTGCCTCCGACGAAA
AAGCATGAAAAACAACGAGAACACCCTACACACAAGCCTCTCCAGCTGGCAACCATCTTC
CTGAGAATCAATCTGATTAGACATTGTATTAACAGTTATATTAATCCAGTTGTCTTAACG
TCTTATTGTGTGAAAATAGAATTGGCACTCATTTGGTTGTTGTTGTTAATCAGCTCATTA
GACGTGAATTTGATTTGAAAGGGATTTTGTTAATTTTTGCTAAACCCATAATTTCCACTT
GCAAGTGATACAAGAGTAACTGACACATCTAGTTAACCCCCGTAAACTATAATAGTTCCC
AAACAAAAACAGAAAAAAAAAGCTTAGAAATTAGCAAGAT
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| Chr coordinates |
Chr chromosome 3 from 1079704..1084935 |
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