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Locus Information
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| Standard Name |
Uncharacterized |
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| Systematic Name |
PAS_chr3_0622 |
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| Alias |
PP7435_Chr3-0580 |
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| Strain |
GS115 |
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| Description |
tRNA ligase, required for tRNA splicing |
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| External sources |
Open in GenBank 
Open in KEGG
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Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr3_0622 size 2439
ATGAACCTGCCTATAGAGCCATTGGTCCTGTCAGAAAAAGAAAGAAATGAAGATACCAAT
GAACTTGTGACACAACTAAAATTGGCTTCCTTGAGAACCAATAAACAGGGTAAAGCCCAT
CATAACGAGTTTACGATATTTGACAGTGACATCACCCTTGACGGATGGCGTTTTAATGAG
TTTGATTATGCTAAGACCAAGATCAGCTTACCAACTAACGCACGAGGGCTGTTTACCAAG
ACATACAAAGATGGCACTTCAAAGATTATTACTCGAGGTTATGACAAATTTTTCAACGTC
AACGAGGTGCTTCCAACTAGACCAGACTGGATTTTAAAAAACACGATAGGTCCATACGAA
GTTACGCTTAAGGAAAATGGCTGCATCATATTTGTTTCAGGTCTACAAGATGGCACTATT
ATCGTCTCTTCTAAGAATTCGACTGGAGATAGAACTGAGTTATCAAGGAACCATGCAAAA
GTTGGTCAAGAATATCTATTGAAGCAGCTAAAAGAGAATGGAATAGCGGCTGAATCATTG
GCTAAATCACTTTATGAATTGAACGTGACTGCGGTCGCAGAGTATTGTGATGATGAATTT
GAGGAACATGTGTTGGAGTATCCAAAAGACAAGGCCGGCCTCTTCTTGCATGGTTTAAAT
GTCAACAAGCCCGTATTCAAATCGTACCCTATGGAGCAAGTCTGCAAGTTTGCAGACGCC
TTTGGTTTTAACAAGGTTGAATATTTGATGAAGGACAACTCGGCTGAGTTGTTTGAGTTT
CTAGATGGCTGTTCGACTACCGGAACTTACAATGGAAGAGAGATTGAAGGCAAATCGGTC
CGAGAAATGCGCATCACCAAACATAAGAAAGTCTCTTTGGAGTATCTTTCTTTCATTAAA
CCACTATTAGTTGGGAACACAAAACTATCTGAAGAGTTTCTGCAAGGTCATGGAATTATT
GCATTGAGAAAGCTTTTCCTCCAACATTGCGGTATGAAAGGGTATGAAATAGCTAACGAG
GAGGACACGGAAGACGAACGAATGAAGGAGTTGGAATTGCAACTCTCTAATATATCACTA
ACCGATGCAATTTACAAATTTGTCATAGTAAACGTCGCAGTTATTGGTTGCGGAAAAACA
ACCACATCAATTATGCTTAGTAAATTACTCCCTAAGTGTGGCCATGTTCAAAGTGATAAT
ATTACCAAACCTGTAAAGGACAAATTAACTAGAATGGCTCTTGAAACATTAAGGGACCAT
GATATGGTAATTATTGACAGGGGCAACCATCTTCTTCGAGAGAGAAAACAGATATTTGAT
GAGTTTGAAGATCTATATCATGATTACCTCCCAATCAATACGAAGTTCAAGTTTGTCTGT
CTGAATTATGTTTCCAACAAAAACTCGCCAGAACTTTGGAACCTAACCAGGTCTCGTATA
ATTGAACGGGGAGACAACCATCAGACTATCAAAGCGGAAACGCAAGGGGTTAAGTTTGCA
GAATCCATTATGAAAGGGTTTATTAATCGGTTTCAACCCGTCGATGTGGATCACGAACCA
GACTCCAAATTCAATGTTGTCATTGATTTAGAAGTCCATCCCAACAATTCTTCGAAAAGT
AATGCTGTGAAGGTCGTCAATACGCTCATTGAGTATTACCCAGAAGTGGTTTCTCCGGTA
TCCGATGAGAAAATTGAGCATGCATTTCAGGACGCTTTGGATCATAAACCGGAACTGACT
ATAAAAGTTGGAAAAGCAAAGACGAAGAAGGTAAAACCTGCTTATGTTGGCATTGGCCTT
AGTGACAAAGATAAAGCTAGACTAATGGATGCGATTGAACAATTATTTGCTAGGTGCGCA
GCAGAAAACAATCAACCAGTTGACATGTCAACATGGGTCACTCTTAAACAACTAGGAAGA
ATCCCAGAGAAGTTGCATGTTACTTTGGCACATATTGCGTCAACCAGGGATAAGAAGCTT
GGGAAGATATGGAATCGATACACAAATGAGTACTTTTCAAAATTTATCCAAGAAATGAAT
AAAAAGCTGCCTGATGACTTAAAAGGGTCTCTGCAGACATTACCTAATACAAAAGCGCAC
ATTCGTTTGAAGTCGCTCTGTATCTCTGAAAAGCTAGCCTGCGTTGAAGTGGACATCGAA
GGCATTATCAACGAATCCCAGTCAATTACCGTTGAATCGACCAACAAATACCCTCACATT
ACTCTAGGTACAGTGGATCAAACCATTCCAGCTGTGGAGTCTAATATATTATTACAGGAG
TTAATCTCGCATCGTGGATCATCGGAAACCCCCGAAACTCCAGACGATCCAGCCAAAACT
CAAATCTCAACTGAAGAAGAAAGTTGCAACAGAAAATATCTCTATACATTTCCACCTGAC
ATCCTATTTAAGGATCTGAACTTGTTTCTGCAGTTCTAG |
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Promoter Sequence
Download FASTA
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>PAS_chr3_0622 upstream sequence, from -1000 to -1, size 1000
ACACAAAGAATTTATGATAGGCACTGTGGAATGTTGAGCAAGTTCTTGGATTTGAGAATG
TTTATCAACACGGGCAAAGATACAAGACGTCATAGAGGAGATCACTTTCGTAGTGTCATA
GAAGGACTCGTTGACTCCAAGCTGAATATCATCCTTACCTAGAAACATGGGGTGTGCCCC
GAAATACACTGCTGCTCCCTCGCTGGATATTCTTGTTCTAGTGGATCTTTTTGTAAAAAG
AAGGGCTGCAACTTTTCCAAACAGCGACGGTGATACCTGAGAGGAGATTTTGCCTGACTT
ATATTGTGTCTTGTGGTATGCTGCTCTTTCAACCAATGAACTTAGTTCTTGGTTACTTAG
TTCCAAGATGGAGATTAAGGACCTTGGAGGTTTGGTAGTCTGAGCTAGTTTTCTATTTAG
GCTTGGAAATCCTTGAGATAACACTAACTTAGGGATCTTAAACATGCTCATTTTTCAGTT
GAGGAGAAGTATTTGAGTAATTGTTCACTTTTTACTCATCCAAGCATCGTTAGTTTTCCG
CGGTGGAAAAATTTCCTTTTTCAGTCACTTGCAGCTGGATACTAAATTAAGGGAAAGAAA
GACGACAAAAGTTCAGATCCCAATTCATTGCCAGCTACTCTAAAGTAATCTATCATGAAG
CCAAATCTTTAGATCATTGCTCACACTTTTAGGACTTTCTGTGTTTTTTTTGTCTTTCAA
GGCGAACTTGACACTGATTAATGATTGGAAGATGGCTTGAAAGACAAAAGGAAAAACTGG
CGGTAGTTTTTGTTACTGTTAGCGGCCAAGCTGTCCATCTTAATTGTGGGTTTGTATTCT
GACTACGCTTCCGCGTGGAATTGAAATATACCCGTTTTAATCACAGTTTATAACGTTCGA
ATGGAACAAATAAAACAATTACATAAGCATAAAATTCTTTGCTCATTCACTACTCGGTTT
GGTGCTTACCTCAAATGACTCTTACTTGAAAATAACACCC
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| Chr coordinates |
Chr chromosome 3 from complement(join(1179154..1180763,1180883..1181711)) |
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