|
|
Locus Information
|
|
| Standard Name |
Uncharacterized |
|---|
| Systematic Name |
PAS_chr3_0641 |
|---|
| Alias |
PP7435_Chr3-0560 |
|---|
| Strain |
GS115 |
|---|
| Description |
Subunit of holo-CPF, a multiprotein complex and functional homolog of mammalian CPSF |
|---|
| External sources |
Open in GenBank 
Open in KEGG
|
|---|
|
Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr3_0641 size 2205
ATGGAGACTCAGATTAGCAGTCTGATTTCTGCTAGAGAGGTTGCATTCCAGAAACCGCAA
CTGTATACAGACATCTTTCACAACCTTCTTCCGTTCATCTACAATCAAAATACTACTTTA
CAAACCTTGGTTATTGACTTTCTCAAAGAATCTTTTGTGGATGAAAAATTGGATAAAGAG
CTTCAGCTTCAGCTGGCTGATGAACTGCTTCAACCTTTGAGTTACCTAATTTCCTCAAAG
TCTCATCTAGAATTGCCAAGGGCCCCTTCACCTGCTAATTTTGTCAAGATTATTCAATTG
ACCAACCATATATATCCGATCATTTTCAAAAAGTGTCTGTCCAGCCCCCAGATGCAGGAC
TTGGAGTCCAAATGGGACCAATTACAGAGTTTGAGGGACAATTTGATTCAAAAATTTGGT
ACTGCATATCCTTTACTCCCACTGAATCCTGAATCGGACGCCAGTCGCTCAACCAGATCT
AACATAACGCTAGTTATGTTCATCACAAATGTGTTGTCAATACTTAGTATTGCTCCACCA
AAGGATCCAAGAGCAGCTAGGGCTAGAAAATTGAAGAACACACCGGAGGATCTATCTATA
GTGAGTATCCCAAGTGATCACAAATTTCTTAACATGACTCGTCTGGAGGTTGAAGGAAGA
CAAATTTTAGACGTCCTCTTTGATGCTTTAAATGATTCCAGGATAATAAACTCCCCGTTA
TTTTGTGTCATTACAAACCGTCTGTTAACATTGTTCAAGAAAAGACCAGGTTTAGTAAGC
GTCAAACTGTTTGATTTCATGATAGCCTATGAATCAATGAATAAGGAAGACCCACTCTTT
GAGTCGAACCAGTTGAAAATGCGCCTTATTCGAAGGTTCAACGATCGTATTCTGAAAGTA
ATGATAGGATATTGTCTAAATAAGAGTTTTGTGAAAGATACGAAGTTACTCAAAAGGTTC
CAGAACAAATTCACTTACTACCAGGGCATGTTTGAAGATCAACGTAAGAGGGGTCTGTTG
AAACCAGATAGTCATGAAATTAAGAGAGAAGAAAAGAGGGCTGAATTTAAGAAGAAAAAA
ATTACCGGAAATGAAAGTTTGGAAGAGCAACTTCAGAACAACCCTTCCGAATCACCCCTT
TTTTACTACAATTCAAGCCCAATAACGCCTGATTTGTCTTACTCATCATTATACTCATTA
ATATCGCCAAACAATAAACTGGCTAGCTTCAATATGAGTGAACTACCACAGAACATTTTG
ATTGACATGATTGCATATTCTTTACAAAATACAACTACTAGAAAACTAGTAAAAGGACTA
GAAATAATCTCTGACAGATTTCAGAATGTAATGAAATTTCAACAAAACTACACCATCTCC
CAGGACCAGGATATACAAATTGCGAATGTCCCGGATTCAGTGAAGCGAGAGGATGACAAG
GATTTGCAGGATGATTACAACCCAGATCTCGTATATGAACTTCCTTTACCTAATTATATG
ACATTCAAAGATCAAAAAAAGCAACTTCTAAAAATTATTAGCCAGTTCATGGAATTGGCG
CAGTTGGACTACAAACAGCCAATTCTTTCTGATGTTTCGAATGATGATTCTTTGAATGGT
GTTGCTTTATCATCGTGGAAGGAAAATACGTGGTTGGTCTTCTTAACGAGATTAGCTACG
CGTGGATTATGTGATGCTCAGCACACCAACGAAGATGGAACTGTAGAGAATCTTAATGAC
TTGGTTAGAGATGCCATCTTCACATATTTTACTGCCGATATTCGTGGCAGAATAGATGTT
GTCATTGATTGGCTCAACGAAGAATGGATTTGTGAAGTTGCTAGAAATCGCAAAGAGGAC
AATGAAGTTCCGGATACACCCGTGTACAATGCTTGGGGATCCAAAGTTTTGGATAACATA
ATTCCATTCATGGAGAATAGCGATAGAAAAATCTTCCTGCGATTACTCTCTGAGCTCCCA
TCTCTGAACGAACAGATGGTGGAGAAAATCAAATCCATTTGTTTGGATCCAATTCGTTAC
AAGTTTGGCTTTGTTTCATTGCAATTTCTTATTATGTTCAGGCCTCCGCTGAAAGACATT
GCAATCAATTTGTTTAGAAGGCTTTATCAGGAAACAGATCTAGATGATTTGAAAGCTGAG
TGTCTTTCCTACTTGAAAAAATACTGTCCAGGTGAATATACTTAG |
|---|
Promoter Sequence
Download FASTA
|
>PAS_chr3_0641 upstream sequence, from -1000 to -1, size 1000
TTCACCAGCTCAATCGATTGATGTTATTGGGATTTCAAAGATTCCCAAAATTCCATACAC
TTACTAGAAAGAGTCCAATCAATTCCATCAGATCCCTCCGCTACAAGTTTCAACGACCTT
TGCTTACCCCCCTATTTCTTTCTCCAATTATTAAACAGAGCATGAACCTTGTCACCATTT
CAGACTCAATCAGAGAAAACCTCATCAAACACGAGGTCATTCCGGATGTTATCAAGGACA
AATCTTTTGTTCCTAAAGGTCTGTTGATCATTTCCTATGGAAGTCCAGATAAGGAAGTCG
TATTGGGCAACACTCTTAAAGTTGAGGATGCTCAATCAATTCCTAAGATAACTTTCACCG
TTAATCTCAATGAGGAACAGGAGATTGCTAGTTTCTTTGACGAAAAGTTCACTCTTGTTG
TTACGGACCCTGACGCTCCATCTCGTACTGATAACAAGTGGTCCGAATTCTGTCATTATG
TCGTCTCCGACTTGTCATTGAGTACAAAGTCCGGAACTACTGACGCTGAGGATCAGGTGA
ATTTTACTACCGACTTGAAGGTTGATACCATTCCAGAATCGGATTCTAAAACACTGGTTC
CCTACCTCGGACCAGGTCCGCCTCCAAAGACAGGACTGCATCGTTATGTTTTCCTCTTAT
ATAAGCAGAAACCTGGTGTTTCTCTAGAAGGCCCTGATCCAAAGAACAGACCCAATTGGG
GTACAGGAATTCCGGGCTCTGGTGTCTCAGACTGGGCTGCCAAAAATTCCTTGAGTCTTC
TTGCTGTGAACTTTTTCTTTGCCCAGAACAAGGACAATTAGTACTTAAGTAGTTTTTTAT
TCTCTCCTTAAAATTTCGTTATGTAAGCATTTTCTTTCAACCTCGAAATCTGCCTTTTCT
TCGTTGGTGAATCCTCTTTGGCATAGGAACGGAACAACTTGGATTAGATTCGATACCCGC
CTTCCTCTCTTTCTTTCGCCTCCCTAAAAACTAAAGCACT
|
|---|
| Chr coordinates |
Chr chromosome 3 from 1215967..1218171 |
|---|
|
|
|
|
