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Locus Information
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| Standard Name |
Uncharacterized |
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| Systematic Name |
PAS_chr3_0642 |
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| Alias |
PP7435_Chr3-0559 |
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| Strain |
GS115 |
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| Description |
Subunit of the SF3a splicing factor complex, required for spliceosome assembly |
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| External sources |
Open in GenBank 
Open in KEGG
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Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr3_0642 size 1530
ATGCCTAGCCTTCTAGAGTCACAAAGATTGTCTTTGGAGGAACTTGATCGGATTGAATTG
GAAATAGCCGAGAGAATAAGACGGAATCCAGATATATATAAGGCTTACTTCTCTCATAAT
TTGTTAGGAGGGGTTAAGAGACCACTGAAACAAACTTTACTCCAGCAGCATGAAATCAAA
CATTTCCTAGATCAATATAGTAAGAAAAGCCAACAAATAAACCAAGAGGTAATTAAAGAT
GGAGAAAAGTTATTCCAAGAGATTCAGGAGATAAAACTGGATCTTTCTGGTAGTTTTAAG
CTCTTTGGCCAGAAAATTGAACAGTTGAAAAATAATCATAAAATGCATCCAAACCAGCCA
CTGGATGAACTCTCACAGCTATATTCAATGTTTAGCAGTCAATTTGAGAATGAAAGATAT
CCCAAAAAGCGAAAAATCGTATCTGCATTTTGCTCTGATCTGAGGCTTGACAGTATCTTT
TCTTTGGAAGAAAACTATGGCCAGTTCCTAGACCTTTCAAAGTTTTACACTCAGTGGCAA
AATCTTCCGGGAAATAAAGAGGCCGACATCAATCTTCATGGCTATATTTCAAATTTCAGT
AACTTCAAGAAATCTTTTTCTTCTGTTAATAAGAACTCTACGGAATACCAAGTATATTTG
ACAAGTCTCTACGCATATTTGTGTGATTTTTGGATCAAGATTCAACCACTCAATGAGCCT
GAAAAAAACATATTGGCCATAAATGCAAAGGGTGTTGAGTTACAGAACAAGAGCGATGAG
TCTATTCAGTTGAACCAAGACGGATCAGTGTTCTGTAAATCATGTCAGAAGTCATTTGCA
AAAGAAACGGTATACAAGGGACATTTAACAGGTAAAAAACATCTTAAGAACCTGAAAGGA
AATGGAAAAGCACCAGAGACAACAAATCAAGTTCCAATCCTTGAATTCAAAATACGGGAA
ATCAGTGTCCTTTTGGAGAAACAAATCCAGGAGACTATCAAAAACGTAGAACGAAGGTCT
CATCTTTCCGAAAGAGAAAGACTAATGGATATCGAAGCTCGCCAACAAGAGTCGGAAGAT
GAGTATGATTTCGAAGGAAGCGACGAGATATCGCACGGCAACTCAGATGAAGAAGGTGTC
GAAACTTTGGATAATGGCTTAAAGGTAGCAATGGGCCCTGACGGAAAACCGATTCCCTAC
TGGTTATGGAAACTAAACGGTCTTTCACTGGAATTTAATTGTGAATTATGTGGAAATGTT
AAGTATCATGGTAGGAAAGAATTCGAATCTCATTTTCAAGAGACTAGACATGGCCATGGA
TTAAGGTGTCTAGGCATCAAACCTCAGTTTTTTTCTTGGTTCAAGGATATTTCTGGTATC
AGTGAAGCAACAGAACTATGGCAGAACATTCAAAAGGAGCATGGGATCGTTAAGGATTCG
GATGAAAGCAACATAGAAACTGAAGATAATGAAGGTAACGTCATGTCAGTGAAAGTCTAT
AACGAGTTGAAGAAGCAGGGTTTATTATAA |
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Promoter Sequence
Download FASTA
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>PAS_chr3_0642 upstream sequence, from -1000 to -1, size 1000
AATGTCAAACCTGCAAACTATGGGTGTCTCAATGAGCATGAAAACAAACAATCTGCCTGG
ACCAGAAATTTCCCAATTAGAATATTCAGATGACGATGACTACTATAGTGAAGACGATAT
GTCACTGTATTCTAACGCTATACTGCCAAATGCCTCCACTGTTCCTGATATTCCCAATGG
AGCTGGGCCAAAAGGTTTTAACGAGAGCTCTAGAAATATGTCGTCTGCAGCCGCTCTCCA
TAGGATGAAAGGCCCTGGCTCAGAAAGTTCAACAGCAATTCGTAATCACTCAAAGCCCGA
CGGAGTCATGTTGAAGCCTAAACTATCTAAGTATGGATCAACATCGTCAATCCAAAGTGG
AACAATCACACCCAAAAAACCTATCAAGTCTGCAGCGTTCACTGCCAGTAGGATTCCTGC
AGCACATGTGGTGGAAGATGCTGAGGGTGAAGAGCCATCGATTATGTTTGTTCCTGAAAC
TGAAACAAACAAGCCAAAACAACTAGCAGTGAGAGCCCCTACGACCAGACTCAAACCCCC
TAGCGTGAATAGATCCCATGACGATTCTTCAGGAAAGGACACGACTGAAGTCAGCGAGGA
AGATCAGGAATCTAACTCAGCACAAGAGTTGGAGTTTGATGAAGATATACACTTCTCGTT
CAATGAGATAACCACAAAAGCTCAACATTTGATACTTAATGAGATAATGAAAAAGATTTC
CTTGAATAGTTCTGTCATTTTTTCGACCTTACCTACCCCAGAAATTGGATGTCATAATTC
CGAGGCTGATTCATTAGAGTACGTACAAAGTTTGGATGTTTGGTGTGACGGTCTACCTCC
CATTTTGTTGATTAATGCCCAGACTATGACTGTCACCACAGCTTTATAATTCTATAGTAT
AATGCTACATATCTAATATAATTATGACAGAGCATATTTCAAACCAGTAAATCGCGGTGA
TATTCAAGGTTTCTTTCCGACTTTTCCCAGGTTATCAAAC
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| Chr coordinates |
Chr chromosome 3 from complement(1218207..1219736) |
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