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Locus Information
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| Standard Name |
Uncharacterized |
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| Systematic Name |
PAS_chr3_1077 |
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| Alias |
PP7435_Chr3-0086 |
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| Strain |
GS115 |
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| Description |
Component of the U4/U6-U5 snRNP complex, involved in the second catalytic step of splicing |
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| External sources |
Open in GenBank 
Open in KEGG
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Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr3_1077 size 7284
ATGAGTAATCCAACTTTTCCGTTTTCTTCTCATTCTGTCTTATCAAATACGGAAAAAAAA
CAGGCTCAATCAAATGACAAAAGATCCATTTCCCCTCCTCCTCCACCCCCAGGCAACAAA
AGGCAAAGATCATTGCAAACAAGGCCTCCCCCGCCACCTCCTCCATTGGGCCCAAAGATT
TCAAGTAATAGGCCGTTTTCAGGAAGTGAGTCCATGCGGTCCATGCGTCCTCCACCTCCT
CCTCCTCCTTCTCGACCATCCATTGCTAACTCTTCTACTGTTCCAGTGAAAGACTCCGGT
TCAAAGAACAGAGTTTTAGATGGGAGAAAACGGAGGTGGCTGCAACTGCAAAAGTTAAGA
TATGCAAATACTACTGGGATCACTAAAAAGGCCTTTGTTCATCCTACCAAAATTGAAATG
CCTCCAGAACATTTAAGGAAAATTATAAATGACCATGGCGACCTCTCCTCTAAGAGATTT
GATAAGGATAAGAGGGCTTATCTGGGGTCGTTAAAATATTTGCCACATGCGATTCTTAAG
CTGCTAGAAAACATGCCTCAACCCTGGGAAGAAACGAAACAAGTCAAAGTTCTGTACCAT
ACAACAGGTGCTATCACATTCGTTAACGAAATTCCAAGAGTCGTAGAGCCTATCTACACT
TCACAATGGGCCACTACTTGGCTAATGATGAGACGAGAGAAAAGAGATCGTAAACATTTT
AAACGAATGAGATTTCCTCCCTTTGATGATGATGAACCTCCCGTAGACTGGGGAGAAAAC
ATTCAGGGTGTCGCTCCACTGGACAGCATTCAAATAGATCTTGATGAAGTCGACGACAAA
GCCGTCATTGAGTGGTTTTATGACAGCTCTAGACCTCTTGCAGATGATCCAGCAATAATG
AATGGTGACTCCTATAGAACTTGGAGGTTAAACCTTTCTCAGATGCACAATCTTTACAGA
CTGTCAACGTCATTACTTTCAGAAATAATAAATCCGAACTACTATTATCTTTTTGATAGA
GAATCCTTTTTCACGGCAAAGGCTTTAAACATAGCCATTCCTGGAGGGCCTAAGTTTGAA
CCCTTGTACAAAGACTTGGTTAACTTAGAGGATGAAGATTTCAGCGAGTTCAACTCTGTT
GATAGAATAATTTTTCGGCAACCTATAAGAACCGAGTACAGAGTAGCTTTTCCTTTCTTG
TTCAATTCATACACACGGTCAGTTCATGTTTCTGCACACTCTTATCCCATGTTCTGCTAT
ACTAGAGTTGATGACCCAAATCTTCCCGCTTTCCACTTTGCAGAGCTATTTTCACCCATC
TCTCCAAACTTGTTGGAGAGCGTTGAAGTTGAAAAGCAAGTATTCGATCTGGAAACTGGT
GAAGACTTAGCCCCAGATTTTGTGTTACCCCAGGACTTTTCATTTTTACTCAATGATGAA
AATATCGAACAGGAAGAAACCAAAGATGCAATTCAGCTTTGGTGGGCTCCGTATCCATAT
AATCGTCGCAGCGGCAAGACAGTTAGGGCGCAAGATGTTCCGCTTGTTAAGAGCTGGTAT
CTGCAACACCCACCAGCTGATTACCCAGCAAAGGTACGTATTTCTTACCAGAAGTTATTG
AAAAACAACGTCAAGAACGAATTACATTCAGCCACCCAATCCAATAAGACAAGAAACATA
GCTTTACTCAAATCGCTTAAAAGCACCAAGTACTTTCAACAGACATCCATTGATTGGGTG
GAAGCGGGTCTCCAGGTTGTTCGCCAAGGCTTCAACATTTTAAATCTTCTAATCCATAGA
AAAGGGCTAACGTATCTTCATCTTGATTACAACTTCAACTTGAAACCGACTAAAACTTTG
AGTACCAAGGAGAGGAAGAGGTCAAGGTTTGGACATGCGTTTCATTTGATGAGAGAGATA
CTAAGAGTTACTAAACTAATAGTAGATGCTCATGTACAGTACAGGATTGGTAATGTTGAC
GCTTTTCAGTTGGCGGATGGAATATACTATATTTTAAACCATCTTGGTCAGTTGACTGGA
ATATACCGTTATAAATACAAGGTTATGCATCAGATAAGGGCATGCAAAGATTTGAAACAT
GTCGTTTATTATCGATTCAATAAAATCATTGGAAAAGGACCAGGATGTGGCTTCTGGCAA
CCTGCATGGCGTGTTTGGCTATTCTTCATGAGAGGGATCATCCCTCTTCTAGAACGATGG
CTGGGAAATTTATTGGCTCGTCAGTTCGAAGGAAGACAATCTAAAGGTGTTGCCAAAACG
ATTACCAAGCAAAGAGTAGATTCATACTACGATTTAGAGCTCAGAGCATCTGTCATGCAT
GATATCCTCGATATGATTCCTGAAGGAATCCGCCAACAGAAGTCCAAAACAATACTGCAA
CATCTAAGTGAGGCGTGGAGGTGTTGGAAGGCTAATATCCCGTGGAAAGTTCCTGGTTTA
CCTGAGCCAATCGAAAGAATTATTCAGCGCTATGTGAAAGCAAAGGCGGATGGTTGGATA
TCAGTAGCTCATTTTAATAGGGATCGTATTCGACGTGGGGCAACTGTGGACAAAGCTGTA
GCCAAAAAGAATCTTGGTAGGCTGACTAGACTTTGGATGAAAAATGAACAGGAACGCCAG
CAGAAGTTTCAAAAGAGTGGCCCCTTTGTTTCCCCAGATGAAGCAGTGTCCATGTTCAAC
GTCATGGTTCAGTGGTTGGAGTCTAGAAAGTTTGTTCCAATACCTTTTCCCCCGATTAAC
TATAAGCATGATACCAAATTGTTAGTTTTGGCATTGGAGAACTTAAAGGAGTCTTACTCA
GCTCAAGGTAGACTCAACTCTACACAAAGAGAAGAGTTAGCTCTGATTGAACAAGCTTAT
GATAACCCTCATGAATGTTTAGCTCGAGTGAAGAAGTTTTTGCTGACACAACGAGTGTTC
AAAGAAGTTAAGCTAGATATGATGGACCACTATACTCATCTTGTCCCAGTTTATGAAGTT
GACCCACTGGAAAAGATTACTGATGCTTATTTAGATCAGTATATGTGGTTTGAAGCTGAT
AGGAGAAGATTATTTCCTAACTGGATTAAGCCAGCAGATTCTGAGGTTCCTCCGCTTCTT
GTATACAAGTGGTGTCAGGGAATAAACAATATCGATGAGGTGTGGCTCACTAAAGAAGGC
GAATGTAATGTGATGTTGGAGACATCCTTGAATAAACTCACAGAGAAAATGGATTTTACG
TTTGTGAACAGGTTACTTAGGCTAATTGTTGATTCGAATATTGCTGACTATATGACGTCA
AAAAATAACGTTAACATCACATTTAAGGACATGAATCACGTTAATCAGCAAGGTTTAGTT
AGAGGTCTACAATTTTCCAGCTTCATTTTGCAGTACTATGGTCTATTGGTTGATCTCCTC
ATTTTGGGTGGACAGAGAGCTGCCGAACTGGCGGGCCCTTCTGATCATCCAAATGAATTT
CTTCAATTTGAAAGCAGAGAAATTCAGAATAGCTCTCCTCTTAAACTGTATTCTCGTAAT
GTTGACAGGGTCCATATATTTTTTCGCTTTTCAAGGGATGAAACAAACGAGCTCATACAT
GAATTTTTGTCTGAAAACCCTGATCCTAACTTTGAGCAGGCAATTGGTTATCCAAATAGA
CGTTGCTGGCCCAGAGATTCCCGTATGAGGTTGATGAGGCACGATGTTAGTTTGGGCAGA
GCAGTTTTTTGGGAAATCAGTAGCCGGTTGCCATCTTGTTTGACTTCAATAAGTTGGGAT
GACTCTTTTGGCTCAGTTTACAGTGTGGACAATCCTAATCTATTGTTCTCAATGTCTGGA
TTTGAAGTTAGAATTTTACCAAAATGCAGAGCAAACATTGAAACTTATACCCAGGAAGGC
GTATGGGATCTCATTGATAATGAGACAAAGGAGAGAACTGCCAGGGCCTATCTACAAGTG
ACCGAGGAAGCAGTTTCAAACTTCAATAGTCGTATCCGCCAAATATTGATGTCGTCTGGA
TCAACCACATTTACGAAGATAGCATCAAAATGGAACACGGCTTTGATCTCTTTATTTGCC
TACTATAGAGAGGCAACTGTCGCCACTGACTCACTGCTCGATGTACTTGTTAAATGCGAA
ACCAAGATTCAAACTAGAATCAAACTAGGTCTCAATTCGAAGATGCCATCTAGGTTTCCA
CCTGCTGTGTTTTACACTCCTAAGGAATTAGGCGGTCTCGGAATGTTGAGTGCATCTCAT
ATTCTGATTCCTGCTTCTGATCTCAAATGGTCAAAGCAAACAGATGTTGGCATAACTCAT
TTCCGTTCTGGAATGGGTAGCAGTGATGAGAGATTGATACCAACCGTTTTTCGATATATA
ACCACTTGGGAGAATGAGTTTTTGGACTCACAAAGGGTCTGGGCAGAGTACACCATTAAG
AGACAAGAAGCTATACAACAAAACCGTCGGTTGGCTTTTGAAGATATGGAAGATAGCTGG
GATAGAGGTCTGCCACGAATAAGCACGCTATTCCAAAGAGACAGGCATACTTTGGCCTAT
GATAAAGGGCATAGAATTAGAAGAGAATTCAAAAAGTACAGCTTAACTAGATTCAATCCT
TTTTGGTGGACCAGCAACCATCACGACGGTAAACTATGGAACCTGAATGCTTACCGAACA
GACGTTATACAAGCTCTGGGTGGTATTGAAACTATTTTAGAGCACACGTTGTTCAAAGGA
ACAGGGTTTGATTCTTGGGAGGGACTTTTTTGGGAGAAAGCTTCGGGGTTTGAAGATTCC
TTGAAGTTCAAAAAATTAACTAATGCGCAAAGGTCAGGATTAAGTCAGATACCAAACCGT
CGCTTCACTCTATGGTGGTCTCCAACTATCAACCGAGCAAATGTTTATGTTGGGTTCCTA
GTTCAGCTAGATCTTACTGGAATTTTCTTGCATGGTAAAATTCCCACCCTTAAAATATCC
CTTATCCAAATTTTCCGGGCACATTTATGGCAGAAGATTCATGAAAGTTTAGTAGTAGAT
GTTTCTCAGGCTTTGGATAATGAGTCGGATATACTCCAGATTGACACTGTTACTAAAGAA
CAAATACATCCTCGTAAGTCTTACAAGATGAACTCCTCATGCGCTGACATTACGTTGGCA
AGTACTTATCCATGGAAAATGTCCAAGCCATCTCTTCTTCATGATCAGAGAGATAACTTT
GATGCATCCTCGTCCAGTAAATACTGGATAGATGTCCAATTACGCTACGGTGACTATGAT
TCCCACGATATTTCTCGGTATACCAGGGCCAAGTTTTTAGATTACACATCTGATAATACC
AGCTCATACCCAGCTCCGACTGGATTGATGGTTGGTATTGATCTTGCCTACAACATGTAT
GATATGTACGGCACTTGGTTTCCTGGAATGAAACCACTTATGCAAAATGCCATGAAGAGT
ATCATGAAGTCAAACCCGGCGCTGTATGTTTTACGTGAACGTATTAGAAAAGGTTTACAA
CTATATCAGTCACAAGCGCAAGAATCCTTATTGAATTCAAACAACTATGCAGAGCTCTTC
GATAATGAAGCTCAGCTGTTTGTGGATGATTCAAATGTTTATCGAGTGAATGTACATCAA
ACTTTTGAAGGAAATGTGACTACCAAGCCCATTAATGGAGCGTTATTTATTTTAAATCCC
AAGACCGGCCAACTTTTTTTGAAGATTATTCATACATCGGTTTGGGCTGGTCAGAAACGA
CTTAATCAACTAGCTAAGTGGAAATCTGCTGAGGAAGTTGCCGCTTTGATAAGATCATTG
CCCACCGAAGAACAACCAAAACAGCTCATAATCACGCGTAAGAATATGTCCGATCCACTT
GAAGTTCACATGCTAGACTATCCAAATATTTCAATTCGTCAAACTGAGCTCAAGCTTCCG
TTTGATGCATCCATGCACGTCGATAAAATCTCTGATGTTGTCCTGAAAGCAAGGGAACCA
CAAATGGTATTGTTCAATATCTATGACGACTGGTTGAAGAGCATATCATCATTCACCGCC
TTTTCTCGTTTAGTGCTTTTGCTAAGGGCTTTGGGGATTGACAAAGTCAAAACAAAACGT
ATACTGCAACCAGACAGCAAAGTGATGGTCAAGGATCACCATCTTTGGCCAACTCTTACC
GATACACAGTGGATGGAGGTTGAGACACAATTAAGGGATTTGATCCTCAACGACTATAGC
AAAAAGTACAATATCAACGTATCATCTCTTACACAGGTTGAGATACGGGACCTTATTCTT
GGTCAAGATGTAAAAGCTCCATCACTGAAGAGGCAGCAAATCGCTGAAATTGAGCAGAAT
GAATTGAAAAATGTCAGTTCGAGTCAACAATTCACTGCGATGAAAACTACTACAAGAAAT
GTACACGGAGAAGAAATAGTTACCGTTACAACTACTAACTATGAGCAGCAACAGTTTTCT
TCAAGTTCAGAGTGGCGAAGTAGGGCAATATCTGCGGCTAACATCTATCTTAGAACAAGA
AACATTTATGTTCTGACAGACGAAGTCTCTGAATCCAAGATCACTTTTGTATTGCCTAAT
AATCTACTTAAGAAGTTTGCTCTTATTTCTGATCTACGTACCAAAACTGCAGGATTCATG
TTTGGCAAGTCACCAGCCGATAATTCCCAGGTTAAAGAGATCCATTGCCTTGTTTTGGTA
CCTCAACTGGGATCTAACATATCCGTTTCAATGGCGAAATTGCCTGCAACCTGTGAGTAT
TTGGAAGGCCTAGAACCCTTAGGGTGGATACACACACAGTCCACTGACTCGGATTATTTG
TCTGCTGCTGATGTTACTGAGCATGCACGTTTCAGCTCAGAGTATTCTGGTTGGAACTTG
GATTCAACAGTCACTTTAGTCGCAGCTTTCACTCCCGGATCAATATCATTATCGGCTTAC
TCTTTAACTTCAGAGGGTCTCGATTGGGGATTAAAAAATCAAGACACGGTTTCAATAAAT
CCTCAAGGATACATGCCGCAATTTGGAGAGAAATCCTCAGTTTTGCTTACGGATCGTATT
AAGGGCTTCTTTCTAGTGCCAAGTACCAATCTTTGGAACTTCGCCTTTAATGGGAATGCT
TGGACTAGCAGTATGGAATATACTTTGAAACTAGATACCCCATTACCCTTTTATCATGAG
CTGCATCGTCCGATTCACTTTATTGAATTTACCAATATTGAAGAGGACTACTTGGACATA
AAGACAGACGATGTTTTTAGTTAG |
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Promoter Sequence
Download FASTA
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>PAS_chr3_1077 upstream sequence, from -1000 to -1, size 1000
ATCTTATTTGACCAAATCTTGTTATCTGACCCTCTAAGGTTAGATGACTTGGATACTTAT
TCCAACATTTTGTATGTGATGGAAAAAGACTCAAAGCTATCATTTTTAGCTCAATTTGCG
AGCAAGATTGATAAATTTAGGCCCGAGACTTGCTGTATCGTTGCAAATTATTATTCTCTC
AAATTTGAACATGAGAAGGCGATAATGTACTATAAAAGGGCGTTGACTTTAAATAAGAAC
TGCTTGAGTGCCTGGACATTGATGGGTCATGAATTTGTTGAATTAAAAAACTCGCATGCT
GCAATTGAGAGTTACCGACGAGCAGTAGATACTAATAACAAGGACTTTAGGGCATGGTAC
GGTCTTGGTCAAGCTTATGAGGTGCTAGACATGCACCTTTACTCTCTTTACTATTATCAG
AGAGCCTGCTCTTTAAAGCCATTGGATAAACGAATGTGGCAGGCAATAGGGAACTGTTAT
GAAAAACTGGGTGAAACAAAGGAATCAGTTAAATGCTACCAAAAGGCACTCAAAATTTCC
ACAGTGGTCGACACACAATTATTGTACAAAATAGGAACCCTCTATGAAGTGCTGAACGAT
ATCAAAACAACCTACAATTACATGAAACTTTGCTTCGAAGAAGAGTACAACCAAGAAGTG
ACTGAAGACACATCTAAAGCCAAACTTTGGCTTGCGAGATACGAATCACAGCAAGGTAAT
TGGTCTTTTACTTACAAATTGGCAAGCGATATTAGCTATGGAAACTCTAATATAATAGAA
GAGGCACGGGCTCTTGCGAGAGAGGCAAGATTGAAACTGGATAGATAGTATACGTTAATA
ACATGAAAATCATACATTTCTGAGGAACGGTGAACTTATTTCGCTTAGAGAGGAATCAGA
AAATCGCGGTCTTGGTATAAAAAAATAAACTCTGATAATCAGAACTCAAGTAAGAAGACC
AATCGTTCAAAATTCAAACCATTCATAATTGCTGACAGGA
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| Chr coordinates |
Chr chromosome 3 from complement(2075877..2083160) |
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