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Locus Information
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| Standard Name |
Uncharacterized |
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| Systematic Name |
PAS_chr3_1134 |
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| Alias |
PP7435_Chr3-0028 |
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| Strain |
GS115 |
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| Description |
Subunit of the RNA polymerase II mediator complex |
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| External sources |
Open in GenBank 
Open in KEGG
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Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr3_1134 size 4356
ATGAGTCTACTTCTTTTCTGGTTCTTAGAGTTTCGTGGGTATCTGGGGTGGTTGGAGATG
TCGCAATGGCACCCATATGATTCAAGCCCCATACTCGATACTATCAACAAGCTGGGTGCA
CTAAAAGATGGATTATATAATGATGACTCGTTGTCGGTCGAAAGATCATTAAAAAAGTCG
TTTCATGATACCAACTCGTTTAGAATGGCAAGGTTTGATGCTGTGTACTATTCCGCCTAC
CGCATTGACAGCGAGCTTCAGGATCACAAAGAAGCCAAGAACAAAAGCAAAGGAAAGTGT
CCTCTAGTGCATGATTTAGAATTACTGCTTTCTGCAAAATTGAGCAACAAAGGTATTTAC
AGCATAGCACATCTGAAAGATTATTGGTGTTTTTGGATTGATACGACAGGGCAAAACATT
TCAGTATTTGAGCAAGACGAATTTCTGTCTCTTATACACTCCTCTACAATTTCAGTCAAG
CGGATTACATTGGGTATGTTTACCAGTAATGATCTCTTTCAAAACCCATCAAGCTCCAAA
TTGATAAACAACATATATATCAATTTTCTTAGAGCATTAAAGAAGCATCTCATAAAGCTC
TTTGCAGACAATTGCCCTGTCAAAAATTCTAGCTCAAAGGTGTTTCCATTTAGCACACAT
CTGTTGCTTCAGACTGATAATTTTAACTACTTTAACGTTTTGAGATTAGATCTCATGATT
AACCATAAGAACGAAGTATTAGTTTCAACGACAGTAGCCGAGAATCCAAGATTTTATAAT
CTTGCAAGCAGAGAGAATTTAGAAACTACAGTTCAGAAATCAAGTTATGCCATCTATCTT
TGCCCATCTGGCATTCGATGCAATTTTGCTGTAAATGGATGTCTCAAAGATTCAATCACG
TCCGACCCACCTAAAGATTATGAGCGATTACTACAGCTCCTTAAAAAATACAATAACATA
TTCATTGATGAAAAGAATACAAGATGGGTAAAAGTTGTTCCCAATGTGAACCATTTAAAT
AACTTATCGCCCCACATTTCTAGCTTTTTGGAGGATTCACATACTGGAGATGGCTCAACA
AGTCTGCGATTTATTGCGTGGCCTCTTTCGTTATGTTTTGTACAATACGGTGTCAACATA
GATGGTACAATTCCACCAAGTAGTCAGTATGACCCTTTCAAGTTGTTAGACCAACGTATT
AGTTACATTAAGGAGCAACAAAATCATGGAGTGGAAGAGGCGATCGAAGAACTTCAAGAC
TTCTGTCTTCCTCCAGAGGAAGACAATATAAAGGGGGTTAAAGATTCTATTTCTCCAGCA
TTAGAAGCAACATGTCCTTCGCCAATTGTTGAGGTTGATATCTCTGATGCTTACTTCGAC
GGGGTGCTAGACGATGTAATGAACGAAGAAATAAGTCTACCTAAAAGTGAATGGAATGAA
CTTTTTGGAGAGGAAGCTGAAGAGAATGAAATTGCATCACCTAATGGAGAGTCATTTGTT
ATGAATTCAAAAGAGCCAGTCAAGCTACCCACCACAACGAATCCGTTTTATGAAGATCCG
GGGGCTCCAGAACCTGCACCTCTCCCCATTATCTCCGAAATATCCCCTTGCGTTCACAAA
GCTACTTCAGTTTTTTCTCCACTTCGATTCAATCCGGTAATTCATGATAATATAGATATC
AAATACTCCACAGGAGGAAAGTTTTATGTAGATCGAAGCGAGTCTCCATCAGGCCCACAC
AAGGACTCCCTTACAAATGCGAAACTATTTTTGAAAGCGCCAACAACAGGAGTTGGGATC
TCGGGAAATAGCTGGACTAGAGAGGAAGATAGTGACCTCGAATCGGACAGTGATGACGAC
CAGGATAGACTACTTAAGGAGGAAGAGGAAGAGGAAGAGGAGGAGTATAATAATGAAAAA
TATCAAGACCGAAGAGATTTGATACAAAAAGAAGGAGAGAAAAAGGAAAATGATAAGACC
AAGATCCAAGAGGACTTTTATCAAGTAATGAAAAGTTCTGAAGGTGATGAAGCGAGCCCA
CAGGCTGACTTTGACATGATAGATGGATCAGACCACAACGAAGGGAAAAAGTTGGAAGTA
GAGAGAAATACAGTTGCCGGTAATTTAAGGATTCATATCAGGGAGTGCAACAATTCAGCC
CTGACAACTATTCCAATTCCATCGGGTGGTTCTAACGATACGATGGACAATTTGAGCCAA
AATTGGGTACCGTTCATAATGCGAACCGTCCCGTTGTATTCTATTCCCGTCTGCTTTCTA
TACAAAGCCCCGAGTTTAAGCAAAGATCGTTTGAATCAAGAGCTACCCATTCTTCTAAAA
GCTATATTATTTGATTTACCTGGCTCCTTTTCTAACAAATGTCGTCATGATCATCAGGTG
CAATCAAAAGTTGACAAGCTAGTTCGAGATGTTCTTCCGGGAATCGAAAAATTAAGTTTA
CTAGATTTTGTTGGACCTGGCAGAATAAGTGATGGTCTATTTAATATAGTAAACAGAGAG
AACTGTCCTAGCACCACAAGTATAGAATATGACTCCAGAGACTCAGTTTCAAATGAGGCC
TTTTTGGGATCACCATCGCTGCCAACGACTCAGGAAGGCTTCATTGAAAAAATGCTGCCA
AATGACACTAATCTCTTGATCCACACAACCCCAACTATGATTAATGTTAAACGATCAGAT
GAGGACCTGAGTGTAGGCATTACTTCCGCAAAGTTTTGGAAATCTTTAGGATTGCAGCCT
CTCGAAGGTCCTAACAATTTCCAGGCCATTGCAATTGTTCCAGATTTTGGGCCACAGTTT
CTTGCTCAGGCCACTGATTTTATTGGAAACTTACAGGAGGAATATAAAACCAACAAACTA
GGAGAAATGTCTCTGATCGAAATTGCAAATGATTCAGTGCTACGGATAACACCTAACGAA
CAAGAAAAATCGTACTGGAAAAATGTGCACGATACCTTACAAAGTCATTTAAACGACATT
TGTAACAGGCTGAAACCGGAAATGCCCCTTCTGATTATTTTTATAAATCCTTTTACTTCG
TTGGTCAGCGTTATAGAAACTTCCCAGGTTTTGAGAGAATTGCGAGATTCCATATCTCGT
TTGCTGAACTTAAATTCTTCTTCAGAATCAAAGAGAAGGAAGAAGAAATCAACAAATGGT
CCTAATGCGAATTATAGAAAAGGGTCTGAGATAAAAAATATTTCCATTTCACAAAAAAGC
ATTCCGTTGAACGATTTTTTTTTGATTGATGGCAGTTACTGTGTCCCCTCTCAAAAAGTG
TTAACAAGAATTTCACTGCAGTTATACTGTTTAGTGACTAGCGGTCATTTTACAAACAAT
ATTGCGCTAATTGCACAAGAAATCCCTTCAGCAATTAATTTCAAATTAACAAAAGTGCCA
ATTGCTAGACAATTGATCATAGACGACTTATATATCCATCTTGCCTATGACAGAGCTACA
GATAAAAGCTGGTGCGCCGCATGCTGGACCGATCAGTATGGTGGCCTAAGGGAAGTGAAG
GCATGGTATTCAGAGCGAAGAAAATTTCTGAATGGAGGTGCTAACCTGATGAAAAGTTTT
GAAGAAATTAGCAATGATATTTGGAGTATCACTATGGAATACATTAAATGCCACCCTGGA
AAGTCATACTTGATTTTAACAAGGTTGAACAACATAATTCCAGATGACGAATTGATACAG
TGGAAGAGGTTATCACTATTGAATAAAAGTATTTATTTAGTAGTCCTTACGATAGACTTG
GAACCGACTCTGAAGCTAAGTGGGGTAAGCAGAGAAAGTGAGGGCAGCGGTGGTGTCAAT
AATGTGATGACCACTACTATGTATCCTGACTCCACTGCCGGGATATATCCTAACACCGCC
GAATCCCTAGGCTCCAGATTTGACAGTCCGGATATTAGCAGCAACATGTTCCAAACGCCA
AGTTCTCCGGCGTTTAACACCTCTGGAAATTTTTATTCAGAGTCCGATGGAACCATTGTG
AACATCTCAGAGGAACTTCTCGGATTAGTTCTCTCTATACCTGTGCCACTTTCAAATCAA
ATCAATAGAATACCTATACGAACAGGATATTTGATTCAAACGGCGAATTTGACGGAAGGA
AAGAGCATTTTGGAAGTGAATCTATTAAGTTGTCCTGCTTTCATCGATCCTGTAGACTTG
ATGAAGAAGATGCTTTGCCAATATCGAAATTTGGCAGACCTAAAAAACTTTTGGTACGCT
TCAATTGTAGATGAAACATGCAATCCGTTCCCGTGGCACATTCTTACTGTATCTAAGATA
CTCAAAGAGTTGGTACACGTTGGAGTTGATGAATGA |
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Promoter Sequence
Download FASTA
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>PAS_chr3_1134 upstream sequence, from -1000 to -1, size 1000
TTCTTCAACTTCATCGTCCTCATCGTAGTCATCTTCCTTGAACTTATCAAATTCAACATC
TTCGCTAGGTACACCGTCTTCAATTTCATTATCTGCAGCGTCCCCTGTAGTATTGTGCGC
TTGTGCAGAAGATTTCACTTGCTTATGTTCCTCTTGTTCGATGACGTTACGATCTAAAGG
TACAATGAATTGGCCATCGTTCTTGCTAAGATCTTTGCTCTGTAAACTATGCTCCTTAAC
AGCTTCGCTTGGCCCATCCGGTGAAACTGTTGATACTTTATCAAGCTGATTCTTGTGAGT
TTCACTCATTTAGCCGTGCGTCTGAATTGTGAAGTTGGGTTTAGTTTCCGTTTTCATTTT
CATCTCTCTTTTCGCACTCGATACCAAAAATAAGGTAGGGCACTACTAATAAGATACAGT
AGCAACAGTTCACAAATGTTGGGGAAGTGAACTTCATTCGGACAGAAAGAAAATTAAACC
TACAATACCCGATATATGATATCCTCTTACTTAAATGTAAACATTCTCCTAAGCATTTTT
ATCTATTTACAGCATCATGAGTACAGTAACATCCAAAGGGACTCAAAGTTAACAGTCTGT
TTTACTACTTCAAGCTTAAATTCATTTCTTGAATCTAAAAGCGCCTCTTGTGAAGTCCCA
AGGTTTTGCTAGTTCCCCCATTTTTCTTCTCTTAGATTCTGTGAACAGAACATGTCTTTT
GACTCGAGGGTCATATCGTACCTGACTGATAGGGCCAGTTTGCCTTGGCCTGAGGAGAGT
CTTTGTATATCCTGTTTGAGCCGTAGATAGTAGCTTGATTACCACATTTCGTGCTTTAGT
TTCTACACAAGTTAATATCCAGTACTAATAAAGTTCAAATTATTTTACTTACTTGCCATC
GGAAGCTAACAGTTGTATTGTCGAAGGTGACTAGATTTTCAATCGATTCCAAGATATTTG
TGCCGTACACTAACAAAAGTGTTACATCTATTATTATGTA
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| Chr coordinates |
Chr chromosome 3 from complement(2186293..2190648) |
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