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Locus Information
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| Standard Name |
Uncharacterized |
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| Systematic Name |
PAS_chr4_0118 |
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| Alias |
PP7435_Chr4-0899 |
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| Strain |
GS115 |
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| Description |
DNA repair and TFIIH regulator |
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| External sources |
Open in GenBank 
Open in KEGG
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Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr4_0118 size 3027
ATGGACCTTCAGCTAAGCCAATGGGTAAGCCAGTTTATGGCCTCAGAAAATGATCCACCT
TGCGAAGAAATTGCAAAGGCCGTCATAGAAAAGCGAATAAGTCTTTTGCAATTAATAAAA
ACCCTTGGATCACATCTCACTGACGAAACACCCCATATAAGAAGTACGGCTGTTGGATGT
TTGAGCAATACCTTGGCCAAGATTGAGCGACTGAACCGGGCTGATATAGAGGTTATTGCT
AAGTTTTATATTGGGAAATTGGACGACAATGATGTGATGAGTAACACATTGGTTGGTCTT
AGGGCTTTGACATCTTTGAAGAATTTCAATCCTGCTCTGTTAGAATCCGTGCTAACTTCA
GTGCAAGAGAAATATGAACCGGCAAGCTTTTTGGCTGCTACAAGATACCAGTCCTTTCTA
CTTTTGGAAACAATATATCAGAAGCATTTGGATTTCATCCTGGCCAACCTCAACGATCTT
TTTGTTAAGGTGTTCATTCACATTTCTACCAATGAAAAGGATCCTAGAAACCTACTAATC
TCTTTCAGTTTGAACAAGCAGATATCCTCAACATTACAGGTGGAAAATTTCGCCGAGGAT
TTGTTTGATAATGCATTTTGTTACTTCCCAGTCTCATTTAAACCCCCTCCAAATAGTCCC
TATAGCATCGCCAGTCATGACTTGAAAACAGGCCTCAGACAGGTCTTTGCAGCCACACCG
TTGTTTGCAAAGGATTTGTTTCCCAATATCTTGGAGAAATTAACCTCAACGTCTCCAGCA
GTGAAGTTGGATGTTCTTCAAACTTTGAATCTGTGTCTGGATACGTACGACAATGACACC
ATTCAAGAGTACTGGCTTACTTTGTACAATGCCCTCAAGTTTGAGGTTTTGTACAATGAT
TTAGCAAATATTGTTGAGTTGGCCGATATAGAGAAATTGAGCACTGAAGATGACTTGGTG
TTCAAAGAAGTCATTGCCCTATTCAAAAATCTCCCTAAAAAATTCACAGATGAGCAAATC
ATCAAAAACCTTCAGATCATGCTGGAAGAGCTTAAGGAATATCTCCACATTTCTCACAAA
TACTTCAAACAAACAGTTTTACTCCTCTCAGTCATGGCTACGTCTAAACTTTCCGTGTAT
AACCACATTGTTGGCGAAGTGCTACCTGTTTTGCTAACGGATGAGCCGTCTACCGTTGTA
GACGAAAAGAATTTGGCCACAGCCTTAAACTTTTTTATTAATCCAGATTACCCAGAGTCA
AAGCTTTCCCAGTACAAGGATGACATCTTGGTAGTATTATCAAAAGGTTTAATGTCTTCA
TCTAACGTGGAAACAACACTGAAATGCATCTGCATCCGTTCACTAGTTAATTTGTCATTC
ATTTTGGATACACAGGAAGTTGCGTCAGTTATTTCTAATTTGTCGGAGCTACTTCTTTCA
ACTATGAAAAATGAGAAGGATCCAATTTTCCAAGAGACTCTGAATGCATTTACAAATATC
TCTGCTACAATGCCGAATGTTGTTTTAGAGACAACTCTTCCATTATTATTATCTAAACTT
CCAAACGAATCATCTTCTGAGATTGATTTGGAACTAGTTCGAAACGTCTTGAACGTTGTA
GTGAACATTTCCCATAGCAAACTATTATTGGACTCGATAATCGTGAGACTATTGAGCGTA
TATGAAAGACTGTTGAATGGGAGGGTTGTTACCATGGATTACTATTATTTTTTGTTGAAC
TCCATTTACTTATTACTTTCCAATTATCCAGAGCTGCTGTCAAAAGACTACGCAGACCGA
GTCATTCCTCAGATAACTTCTTTGACTATAGTCAACTACCGGCTCTCCAAAGAGTCTCCT
GTTTATTTAAATGAAAGGATATTAGATCAATGTGGGAAGATAATCAGACTAATTATTTGT
AAACTTGAACTGATACATCATCAGAAAATCCTTGATGATGCAGTTGATACATTTTTGCTA
GGATCGGATTCTCCCCTGTTTTCAACAAGTTTAGGATTAGAAATTTCCCTAGTTTCTAAG
CCCCCTACATTGGTGAGTTTATTCAACAAATTTTTAAGTGCAGTATCTAAGGACTGTCCT
CTCAAGATTGAGCCTTTGGATGTGTTAAGTTCATTAGTTGAGATCACAAGAGATTCGAAA
CACTTCGAATCGCTTTTCGAGAGAATGGGTTTCCTTGAGCTTATCTGCCTTTTGGCTAAC
AAATACATTTCCGATTCGGATTTGGAGAAAATTTTGAATGAGTTATCGGAAACGATAGAC
CTTCAATCTTCTGATAGTTTGGGAACATTGGAAGTTATGGCATGGATTACAAAGTCCTTA
GTTCTATCAAACAGTCCATTGGCAATGAAGTATCAAGAATACTTCTTTTCACTCCTTGAA
ATCCCATCAGTTGCATCGGTTTCGCCGAAGTTGTTGGAGGTTCTAATCGCAGAAGTCAGT
GAATTGGAAGTGAATAAACGTGACAAAAAAATCATAAATCTCAATGTTCGTTTACTGTAC
AAACAAAAGTTCTACAACATCATGCTTCCGAAAATCATTGAAGGTTATAGGAATTGTGAG
CAGGCATCAAAAGAAACATATCTACTTTTATTATCGTTGATCTTGAACCATGTTCATCAA
AGAGAAATCATTCTATCTCACCTGGAGAATATCTTACCACTGATTCTTCAAATTATTCAA
AGTGACAATGCTAAATCCAGAAATTCAGGCCTGGAGATATTAAATCTAACTATTGAATCC
AACTGTATGCTTATAAAGCCTCATCTACATTCAATTATTTCAAGATTGTTGGCTATCACC
AAGGACAACAGTGACCTGAACGGCCAAATCAATGCGTTACTATGCTTGAAGGAGATTGGT
ATTAGTAAGATTCCTCTCAGTCAATTACAACCTTTCCGAACCACTATCATCAACCAAACA
GTTGCAGTCTTGAGTCACAAAAAGAGAAAAGTTAGGAAATTAGCCGCAGATGTAAGGCAG
ATCTATTATGAATTGGAACAGAGCTAA |
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Promoter Sequence
Download FASTA
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>PAS_chr4_0118 upstream sequence, from -1000 to -1, size 1000
ATATTTCTATCCACCTCTTGAGAGGCAATTAGCGCTACTTCGGCCTTGCTCTTTCTCCAG
AACATCACTGAATCAATAATCGGTTTAGGGTTTTTCTTTGCTATGTTACCAAGGGAGTCA
ATTATTTTGTCAAAAGTGGGATCAGCTTCAGAAAGAAAATTGACCACTCCCAATTCATCG
TCTAAAGCAAATTGGTCTAGACATAAATGAAGTTTTCTTTCCGCATATCTGACAAACTGT
GTGAATAGTATATGCAAAGCATAATCAGCTGGAGTTTTAAATTCCGTTGCCAGGTTCCTT
CTAAGGTCCAAAGTATTCTGTGATTCATAAATATAGTTATCCTTAGTCTGTTGTTGATGT
TCCAGACTGATGTTTGCAGTATGTTTAGTTGATGGATCATCGAGAGTAACCTGATTCAAT
CCTAACCCATGACTGCCAGTTTCGACGCCGTTTGGGGACAATTGAGGTAATTTCGAAATG
TTCACTGATTCTTTAGAGGCAAGAATGTCTGGAGGCAAGGTTGGAAGTTGAGCAGATTGC
CTGATTTCTTTATTTAAAACGTTTGAAGAGAAATTCTCATAAGAATCATTGATATTACTC
AAAATAGGTAACACATCACCGTGATTATCAGAGAACCCACTCTGTTCCCTTTGGTCTTCC
AAAGATAAATCTATTGATTGATTCTGGTAAACATTGTTGGTTTCACCTGGAGAATCAGGT
AGAACTTCACTATTGTCATCATTATTTTGAGGCGGAAAGGAATAACTATTCATTCCTGGA
TCATTCATGGTTTAGGTAGGCCTAAATAGGTACTCTGTAACAGTTCCTTCCTCCAAACAA
TGATAGTTGAATACGATCCTCTCTCCAAACGATGAAATCCATTATGCCTATTGAAGGTCA
CCTGACTGACAATAGTTCGCGACGCCATTCAACTTACTTTTTGGGGGACTAAAGATCAGA
GGTAACCTGCTGATAGCGTAACTACAACTACTCGAGATAA
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| Chr coordinates |
Chr chromosome 4 from complement(228154..231180) |
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