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Locus Information
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| Standard Name |
Uncharacterized |
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| Systematic Name |
PAS_chr4_0308 |
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| Alias |
PP7435_Chr4-0688 |
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| Strain |
GS115 |
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| Description |
Transcription elongation factor |
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| External sources |
Open in GenBank 
Open in KEGG
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Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr4_0308 size 4503
ATGTCTGCTCCTTCTCCTTCAGTGTCAGAAGAAGACATCAATGAAACCCGAAACTCGATT
GATGCCGATGCTTCTACGGTGCAGGATTTACTAGACCAAGATGCTCAGGAGGGTTCAGGT
AGTGACAACGAAGGTTCAAACATAGTTGATTCTTCTGAAGAAGACGATGATGAGGACGAC
GAAGAAGAAATGCAAAAAGTCCGTGAGGGGTTTATTGTAGACGATGACGATGAAAACGAC
GAAGATGGTATCCCTTCTTCCACCAAGAGAAAACACAGAAAGAAACACAAGAAGAGATCC
GCAGAAGTGGTTGAAGAAGTCGACGAAGATGACCTACAATTGCTTATGGAAAACTCTGGA
GCTGTTCCTGGCCAGCAGCAGAACGTCAAGTTTAAGCGATTGAAGAGGGCAGAACAAGAC
GAGAAGGCCCAAGACTCCGACTCAAGGGGTTTGAACGATATGTTTAGTGATGAGGAAGGC
CCCGGTGGCGTAGTGGAAGAGGGTTCAGAAGAAGAAGGTTTAGAAGATAACCTCACTACA
AAGACACAGAGATCAGGAAACCTGCCACATGACGAATTCGATGACTTTATTGAGGAAGAT
GAGTTCAGCGACGAGGATGATGAGGCCCGTGATGAGCGTCTTGCAAGAATGAGATCTGCC
AAGGCCGCTCCACAACTTGCTGGGTTGCAAGGTGAACAATATCAAGAGATTATAGAGATT
TTCGGTGATGGTACAGACTATCAATGGACTCTGGATGCTGAGGAAGAAATGGAGCAACCA
CAACAAGATCAAGAGTATGACGAGGCCGGAGAAGAAATTAAGGGCACCACAACTTCTTTA
GCTGATGTTTTTGAACCCTCTGAACTAAAAGAAAAAATGCTTACAGATGAAGACAACGTT
ATCAGAGTGACAGACCTTCCCGAGAGATTTCAAGCCTATAGGAAATCCATCAAGAACTAT
AAATTATCCGATGTTGATTACTCCAATGAACGAGATTGGATTGTCGAGCAATTGAAGTTA
GAGAAAAGGGATTTCCTCCAGCATTTGACCCAAGCTCACTCAAGTGTAGCTCACTTGGAA
GAAAAATTTGAGGCTTCTGTCAAGAAGATTGTTGATTTTATTGCTATTGAATCATTTGAA
GTTCCCTTCATTTGGAATCATAGAAGAGACTACGCTCTTCATACCTATAACGATGATTCC
AATAATACCATCATAGTCAAATTGCTGAATGAAGATGACTTGTGGAGGATTGTTCAGTTG
GATCTTGATTACCACTCGATCCATGACAAAAAGGCTGCTCTGAGTTCAATCTATAAACAA
TTGGATCTAGATGTAGTTGATCCTACATATGAAGAATTTTTTGGGTCTGCAAGAACGTTG
TCCGAGTTGCAAGACATTGATGACTATTTAACATTCAACTATTCTTCGCAAGTTAAGAAC
TTAACTGCCGTTGCTGAACTATCCATTGAAGGAAACGGAAGTGGCGAAGATGAAGAACAA
ACAACAAAAAGTTCGTTCGCCGAAGTAAAGATGAAGAGAAAGTACTCGAAGTATGCTATC
TACGATCGAATCAGACAAGATGCCATTTACCCTGTTGTTCAATCTATTGCCAATATCTCT
CAAATGAGGGAGAACCTTGCGCAGAGTAAACGTTTGCATCAAGTAGAAGACCCTATTGAG
TCTCCAATGGATATGATAGCAGACATTATGTCAACAGAAAAGGACAAAACTACTTTCATC
TCATCAGAAAAGGCTTACCAGGCTGTAAAACAGTTCTTTTCTGAGCAACTTTCTTACGAG
CCATTTATAAGGAAAACAATTAGGACTGCTTTCCAGTCTTTTGGTGTTATTAATATAGAG
CTCACTGAGCGGGGAAAGCTCCAAATTGAGCCTGAATCCCCTTACTTTGATTTCAAGTAT
GCCAAAAACAGGCCTATCAGTGCCCTCACTGCAACTCCAGATTTGTATCTGCGCATGATT
CAAGCTGAGAACGATGGACTTGTGAACATCAAAGTCGAGCTCCCTATGTTGTCAACAGTT
GTTGATCATTTCTACAATATCTTAAAATCTGATGGTACTTCAGAAATTTCAGAAAAATGG
AATGCTCTTCGTAACGATGCTTGGAAACAATCTTTGGACAAACTTATTCCACTTGTTCAG
CTAAATGTAAAGGAATCCATTAGACGTGATTGCGAACGTGTTCTATACTTTCAAGTTAAA
AACTCATTCACCAAAAAGATCGACCAAGCACCATATCAACCTCCAACATATGCAAAGGGT
ACTATTCCAAGAGTATTAACTCTCTCATTTGGTGAAGGTAACAGAGGTGATGCTGTACTT
GGTGTCTTCATGGATGACAGTGGCGATGTAAAATCACAAATTAAATTTGACGAGGATTTT
CAAAGCCGGGATTTTTCAGACAGTCTGACAAGATATATCAAATCCAACAATATCAATCCT
GATATCATTGGTATTTCTGGTTTCAATATTCATACCAAAAAGCTCTTTGACAAAGTCAAC
GAACTTGTCAATGAGGAACGTTTAACTATAGAGTATGATAATGAGTATGGCTATGATAGG
GAAGAAGATGGAAGAAGTGACAAACACCTTATCAGAGTGATCTATGTGAACGATGAAACA
GCGCGTTTATATCAGCACTCTTCTAAGTCATCCGCAGAGTATCCCAACAGACCTCAGTTG
GCAAAGTACTGTATTGGTCTGGCAAAATATATCCAGTCTCCCCTTTTGGAATATTTGGCC
CTAGATGAAAGCATGTACTCCCTTCACATTCATAAGCACCAAAATTTATTACCCAGAGAA
AAGCTCATTGATGCTGTGCAAACATCTATCGTTGATATCGTTAACTTGGTTGGAGTAGAC
ATCAACGAAGCGGTAAGAGCTCCGTACCACGCATTGGCCCTACCCTATGTATGTGGACTG
GGACCACGTAAGGCTGCTGGGCTTATCCAATCCATTCAAAGAATTGGGTCTAACTTGGTT
AACCGTGCTCATTTGATTACCGAGCAGTTAACTTCCAAGACAGTTTTCTTGAATATGGCC
TCGTTCGTATATATAGTGTTTGATCCTGATGTTGAACGTAATCCTCAAGGTGAGATGGAT
CTACTTGACTCAACAAGAATTCACCCTGAAGACTACTCGTTGGCCAGAAAGATGGCTGCT
GACGCTCTTGATATTGAAGACATTGATGATGACGATGAGAGTGCCATGAGAAATGCGATA
TACGAGATGGTTTTCCCTCGTAGCCCACCAAAGGATGAGGACGATTTAACCTTTAAGCTT
GACGAACTGATTTTGGATGACTACGCAACTGAGCTCGAAAGAAAACATCAACTGAAGAAG
CGTTCCACCTTGCAGATAATAAAGGAAGAGTTACAATCTCGTTATAGGGAGATTAGAAGG
GATTTCCACATTTTGAACGAAGCTGAAATATTCCAACTATTAACGCGTGAGACTGTTGAT
TCTTTCCGTAAAGGTATGGTGATCCCAGTTTATGTTCGAAAAGTGGAATCAAGTTACATG
AGCGTATCTACTCAATCTTTAATTGCAGGAAATATCCAAAGACAAGATATTCTTGAACCA
AACGATAGACGTGATCCAAGAGAAGTCTATTCTGTGGGCCAAACTGTTAGGGCCTGCATT
TTGGATGTAGATTACTACAATTTCAAGTGTCAATTGTCCTTATTGCGCCAGTTTACTGAG
AACCAAGTAGCTGGCCTCAATGTCAACAGGAACCCTAAATTCTGGGATATTGAATCCGAA
AATAGAGACAGACAAGAAGAAATCGATAAGCAGAGAGAGGAGAGTCGAGAATCTCGAGTG
ATTAAGCACCCATTCTTCCACAACATGAAGTCCAAAGAAGCAGAGGATTATTTGGCAGCT
AGACCAGTCGGCGACGTTGTTATTAGACCATCTTCGAAGGGTAGCAACCACATCACAATC
TCTTGGAAAGTTGCTCCGCAATTGTATCAGCACATTGACGTTCTCGAAGAGAATAAAGAT
GATGCCAATGCCATTGGTCGTGTGCTCCTGGTTGGAAAATACAGGTACCACGATCTAGAT
GAACTTCTGGTTGAATATGTCAACAATGTTGCCAATAAAGTTGAACTGATGGTGAGTCAT
GATAAGTTTATGAGTGATAGTTTAGACTATGTCAAAGAATGGCTGGAAAGATATTCGAAG
GCTAACGGGAATCGATCACACTACATTTTTACATTCAACAGAAAGGCTCCAGGTTGGTTC
TTCCTTTTGTTCAAACTAAATCCAACTTCAGAAATCAAGATATGGAATGTGAAAGCACTT
CCTGATGGTTATTTGCTGGCCAACAATGTATACCCCGACACCAATTCATTGTGTAACGGT
TTCAAGACGTTGATGAGCTCTCGAAGACAGATAAAGCAACGAAGCAACAGAGCTGGGGGT
GAATACAACAACTCTCATGCTGGTGCCTATGACAATGGTTATAGCAATGCTCCAAGGTAT
TAA |
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Promoter Sequence
Download FASTA
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>PAS_chr4_0308 upstream sequence, from -1000 to -1, size 1000
GATCGATGGCCGGGAAATTTCACATTAACCGCTCAGGCATCGTGTGTGTATTAGGTAATC
GCATTTTTTATAATCCTTTCCAAGCTCCTTCATAACTTGGTGTAGGTTCCTAGTTGGTGT
TTGCCTATTATTAATTTATTCAACTTTTCAAATCACAGAGTGTTCTAGCAGGTTTGATCA
AGTCCAACTCTGAGTGACTTATATCTCATCCGTTTGTATCATATCCGTCCCCCCTCTACT
ATGGCAGGGGAATCAATAAATGACAAACTTAACAAGCTGAAACAAAAAAAACAATCCACC
GTTGCCAAGAACAGATCTCAGCTTGCTAAACATCAAGATAAACTCAAGTTGGAATCTATC
AAGGTTCAAGTGGATGACTTGAAAGAAAAACAGTCAAGAGCAAAGAAAAAACTAATAAAT
CTGGATGAGCAGAAAAAAAGATTGAAGAACTGGGATTATTCTATACAACAAGACGAGGAC
TGGAATGATAGATTAGAAAAATCTGATTTACCCGATGACTACGCTCAAATCGCCGAACGT
GCTTATACCAAGGATCTTTCAAAAGCACTCACTCCGTTGTCTCAAGAAGAATACAATACA
CAGAAACAAGAATATTACAGAACTAGGTCTCAAGGGATTCCCTATGTGCATAAACCATCC
TCTGAGAAGCTTGAATCCGTGATTAATCACGTCAAGGCTAAAGACGAACGTACTCTGCGA
AAAATCAACAAAAACAAAATTAGAAACTCTCTTAGTGGAGGAGATACCAATTACATTAAC
GATAAGAACAAGCAATTCAACGAGAAACTAAACCGCCACTACAAATAACCTCTTTCACCA
TCGTATATATGAATACCAATGTAATATTAGACCGTATAATAATTGTCGTGTGTCGACTAA
TATTCTTGGAGGGCCCGTCCAACATATCCTCGATGAACATGAAAAATCATAAAAACAAGC
CTAAACCAGACACCTCAGACTTTCATTGCTCTTGCTGAAA
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| Chr coordinates |
Chr chromosome 4 from complement(613304..617806) |
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