|
|
Locus Information
|
|
| Standard Name |
Uncharacterized |
|---|
| Systematic Name |
PAS_chr4_0831 |
|---|
| Alias |
PP7435_Chr4-0121 |
|---|
| Strain |
GS115 |
|---|
| Description |
Possible U3 snoRNP protein involved in maturation of pre-18S rRNA |
|---|
| External sources |
Open in GenBank 
Open in KEGG
|
|---|
|
Gene Sequence
Download FASTA
Hide Seq |
>PAS_chr4_0831 size 3570
ATGAGTAAAAGAAGAATAGATGAGTTATCCAATGGGGAATCACACATTTCCGATGCGGAT
AATGAGTCAGCTTCTGCTCAGACAGCAGAGATTGCTCAACAGATGGTTCATTATGAAGAT
GATGCGGACCAACCTACGAGTGAACCCCGGCAGAAGAAGTCCACTGTGGCGAACCTTTCG
GCTCAGGATATTCAGATAGCAAGGGAGACAGCCGAGTTATTCAAGTCTAACATTTTCAAA
TTACAGATTGATGAATTGGTGAAGAACTTAAAAATCAAAGACTCTCACATCAAAGTGATA
GAAAAAGTATTACACAGGTTACACCATATCATTCAGCAGGTCCCAGAAGTGGAAAACTTG
ACGCTGAAAGATGTTGAATCTTATTTTCACGTTTCTAGCAATAAGGTGGCCGTGCCTTTC
CCCGATCCTAAACCATTTCATCCTAACTATAAGTTTTCATTCCTGCAACCCTCTGATGTG
TCTTTGATTGGATCTTTTGGTCTGAAAACTGCCATTCGACAACCAGAAGGCAGTGTCATT
GATATGTCAATTACTATGCCATCAAAATTGTTTCATTCAAAGGACTATGTAAATTATCGT
GCATTTCACAAGAGAGCCTTTTATATTGGCTACCTGGCTGACCAACTTGTAACACTATCC
CAAGAGCACTACCTCCCCATTAAGATATCATATGAATATGTTAATGGTGATAAACTATGT
CCAGCTATACGCGTTGAAAGCATCACTCCAGACCAACCTAATCCTGAACATCTGGTTTTT
GAGAAAACCAAGTTCTCCATCCGAATTATCGTAGGATTTGAACTGGGTCTCTTTGAAGGA
AAGAAACTACTTCCAGATAAGAATTGCATAAAAGTTCAGTCTCCAACAGATCAAGGATCG
AAAATGTATGGCGATCACGACAGTATACAACTCACCCCAACTCCATTGTACAATTCTTCT
CTTTTGTCTTCTACAACATATTCGCACTACTTAAAGCTGTTGTATACAGCAAAGAAAACC
ACAGAGAGCTTTAGGGATGCTTGTGTACTTGGAAAACTATGGTTACGACAAAGAGGCTTT
TCGTCACATTTCAATGAAGGTGGATTTGGTCATTTTGAGTTCGCCATACTGATGACTGCA
TTATTACAAGGAGGTGGACTCACTAGTAACAAGATTTTGTTACATGGATTTTCAAGCTAC
CAGCTTTTCAAGGGAACGATCAAGTATTTAGCGACCCAAGATCTTATGGACGAAGGTTAT
CTTTCTTTTACTTCTGCTATTGGAGAGACGTCATCTAAATACAAGCCTGATGGGTTCCAT
GTTCCCACAATTTTCGATAAGAACACAAAAATAAATATCTTATGGAAAACCACTAAATGG
TCATATGAGACTTTACGAAGACATGCACAGCAGACCCTTGTGGCCTTGAATGATTTAGTG
TATGATAGATTTGACTCCGTCTTTTTGCAACAATGCAGAACACCCAGCTTAACTTACGAT
TTAACGATCAAAATACCATTGGCAGAATTGGATCATGAGAAAAATTTTGGTCCTCTGGAG
AAGATCTCATTTATTTCATTTGAGAATTTCATAAAGAGTAAGATATACGCCATTTTGAAA
AGAGGATTAATGGACCGTGTTACGGATATCTCCATTTGGATAGAAAACTTGATAACGACA
TTCTCAATTCATAAACGTAAGGCCGGAGGACCTTCCGAGGGTAGAAACATAGTCATTGGA
CTCTTGTTGAATCCACTGGAATGCGAGAGATTGGTTACTAAAGGCCCGGACAACGAAGAC
GAGGTCAATGGAGCGAAGTTCAGACAGTTTTGGCAGTCGAAGGCCTCTTTGCGAAGATTT
AAAGATGGTACCATTCAAAATTGTTGCATATGGGCAAGCTCATCGTCAGAGCCTGTAGTC
CTGTCGATCATAAAATTTCTTTTCGATTTACATCTGTCATCTAATACCGAGACAAGCATT
TCAAGCCACTTAGTCAGCAATATCTCCGAGTTTCAGAGTTATGTGCCATTGCCTTCCCTG
CCAGCATCTACAAAGCAATCAATAATCTCAACTGCAGCATTTCAAAATTTGAACAATTCC
TTTGATGAATTATGCAAGATTTTGTACAGTTTGGAATTGCCATTAAGAATCAAATCAGTT
AATCCTGCCTCGCCAAGCTTGCGTGCGACTTCGTTACTCCAGCCTGTTCCATTTGCTGTT
TCCAATCCAGATTTTTTCAATGAGGTGATAGTACAATTTGAATCCTCTACTAAGTGGCCA
GATGAATTGATTTCTCTAGAAAAAACTAAGAGTTCTTTCTTGATTCGAACTTTGGAGGTT
TTGCAAGGTGAAACAAATTATCAAGGTTTCATAACTAAGGATGAGTCGGTTCCTTTAAAC
TACGCAGTAACCCTCCTAAACATTTTAACACCACAAGGATACGGCTTTAGAATACGAGTA
TTGACAGAACATGACGAAATCTTATATTTGAGAGCTATCGAGAATGCAGACCACAGACAA
AGACCCATCCTTAGAGATACTTACCTCCGATTTACTCAGAAATATATTGGATCCATGAAA
CACCACAGAACAATGAACACACTTGCTTTCCATTTCCCTTTTTTCTCACCCACAGTTCGA
TTATTCAAGAGGTGGATGGACTCGCAGCTGTTGTCAGTTCATTTTCCTCAAGAGTTCGTT
GAACTTCTGGCCATAAAAGTATTCGTGGACCCAGCTCCTTATTCAGTTCCAAGTAGTGTC
GAATCAGGGTTTCTTAGAATTCTACAGTTTTTGAGTCAATGGAATTGGAAAGAAGAACCA
CTGATCTTAGATTTGTCAAAACCAGTAGACGACTCAAGCTTAAACCCTACTACCGAGAAT
GGCACAAGTTATATTGACAAATTGAAAGACAATTTAGACGTTCAAACATATCAGCTCATC
AACACAAATTTTGACAAGCAACGTAAAACGGACCCCACAGCCATGAAAATGCAGTTTTTT
GTTGGTTCAAAGGATGACAATTCCGGTATATTATGGACCAATGATATCAGCTTACCTGTA
GCAACCAGATTGACGAGCTTGGCAAAAGTAGCCACTAATTTGGTAATGAAAGGTGAACTG
AATCATAAAAGCATCAAGCTACTGTTTACTCCTGCCTTGGCAGACTATGACTTTGTGATT
AAGGTCCAGACAGAAGATCTAGTATCCTCTAGTGGAATTGCAGAGGCCAAGGTTTTTGCC
AATGTGGTTAACGGAAGAACTTCTTATCCTGATGATATTACCTCTAAGATGGATCCTATC
CAATGGTATGTGGATGAGTTGAATGACAAATTCAAGGGTCAAATAATCTTTTCTACCAAG
AGATTTACCAGTTTAAATAAAAAGGGATCGAATGTCGTGACTGGATTATTCAACCCTTCC
ACAGTTGCAAAGAGGAAGTTCAAAGTGTCATCGGCTTACAACTGTAAACCTGTGGAGGAA
ACAGAGCATGTGACCTTTAACAAAGAAAGTGCGCTTAATGAAATAGTAGCCCTTGGAGGC
GATTTGGTGGTTGAAGTTGTTTTGAAGTAA |
|---|
Promoter Sequence
Download FASTA
|
>PAS_chr4_0831 upstream sequence, from -1000 to -1, size 1000
AACATCCAGCACCAGGTCTACCTAGGACCAAGCACAACTCACCAGCTTCGATAGATCCGG
TAAAGTTACGGATAATTTGTCTAGTCTTGACATGTTCTCGTTTTGCAAATCTAATGGGCC
ACATAAAAAAGTTACGCAACATTTCATCCACAGTAGGTCCATAGGCTGCGGACACATCAA
TTCCAGTAGCTGTTAAGTTCTTGAAAGCCACACCGGCTGAGCAAGACTCAATTCCTTGCT
CTTCACTTTTAGCTCTTAAATAATGCAGGAGGATCTTCAAATCAAAATCATCCTGGTTGA
CCTCAAAGGCTGCAAGCTCTTTCTTGGTCATTCGACTCATTGTTCTAGCCAAAGACTGAA
TTTTCTGAACAGCTTCGCTCTGTGTCAAAATCCGGGACAACTGTTCAGAGTAGATGTCAT
CTTCATTCTGATTTTCCAAATCTCCTACAAATCTAGTGGGCTCATATGGCACCGTATCTT
TCGGAGAGTCAATATTGGAGCTCTCCTTGTCTTTGTCATTAATTGACGAAGAAGTCGAAG
ACATATTGATGCAAGTTTCAGATAATTTGCAAGAGTGTCTTACAGAGGGCAGCTCCACTC
TCTTTTATATTTTCCTGCACTTTCCATGAATATGAGTGATTATGGTAAAATTTACTCTGT
GGTAACTTTATTCGGTCAAGTTTGGGTAATCTGTCGGTATCAATAACCTTCTTATTCAGC
CGAGATCAGTCTTCAGATCTCCAAAGATATCGGCATAGGGTAAAAATAAACCGATCTTAT
GTTAGGAGATAAGTAAAACAGCGGCCGGAATAAAAGGACCCTCGAAATGCTTACATAACG
GGTTTTCTCTCCTATCTTTCATTTAAGACCACAATGTACGCTGATCACTGTGTATGTTTC
TGTACTAATAAACTTGTCTGTACCACGCAAAAAATTTCAAAACTTTTTTTTCCTTTAGGA
AGGGTGAGAGAGGTACTAACAACCTAGTCACAGCTAAATC
|
|---|
| Chr coordinates |
Chr chromosome 4 from complement(1563689..1567258) |
|---|
|
|
|
|
