N.C. Yeastract
K.phaffii
YEASTRACT+ INESC-ID IST IBB
Home > Search by DNA motif > Result > View in Promoter Contact/Credits     Tutorial     Help

 

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!
Standard Name PAS_chr1-1_0217
Promoter Sequence

Consensus
CYCCNY: -858 -523 -519 -244 -239
>PAS_chr1-1_0217    upstream sequence, from -1000 to -1, size 1000
CTTCGAACTCGGTGATTGCCTTTGCAGTTTCCTCGCTAGAGGCAAATGTCACAAAGGCAA
AACCGCGTCCAGTCAACTTTCCCACTCGCCTAGAAAACCTCTTGGGAATCTCAATGCCTT
CGATGTCGAAGCCCGTAATCAACTCCCTGAGCTCTTCTTCGGTGGTGTCATAATCGATGT
TTCCGACAAACATTCTCTTTTCAAGGTCGATGACCTTCTCGTTTGTTTGTTGTTGTTCTT
CTTCCGACATGATGTGTGAAAACTGATTGAAATTTAGTAAAATGACAACTTGGTATTTTT
CCTGGTACTTCAAATATCTGCTGTGAAAACGTGCTGCAAATTGCTGTTCCTTTTGATACT
CAATCGATGAATTCGGGTGATATCTTATCTTAACAAGAGGGTAGTGTTCCGCTGTATATA
TACAAGTCGTGTGGAAAGGGCGTGTCCACGCGAATTTGAACAGACTTTCTTTCTGCCCTC
CCTn>CCTC
CTAGGAACGATCTAATCTTCTGCCTTCGCGAGGGTAATGTGCGGACTCTGAAT
GCGCTGGCGAACGCGCTGCCTAGCTAGGTGAGGAAGGCAGGTGTTAGGACGTAGCAAGTC
AAGTGAACCGAACTAGGGGTAGCTGTGGAGAGGTACCAAGGCCAATTGAAAAAATAGCTG
CCGGACAGTACGCTTAATATACGAGCAACCAGCAAAGAGCAAGTGATTTCCAAAGTGGTG
AGCCCTAATTGCCCGGTCTTATCACAGATTAAGCATCCCCAC>CCCATCACACTTTGCAAA
TAGCAACCAATCCCGCATATTAGCAAGATGCGCTCACCGCTCGTCGCGTCCACTATATAA
TTCTCTGCCACCCTTAAATCCATAAGATGCGCATTACCTAACTAGGATCTCGCTTTTTTG
GCCAATCAAAAGTTGGATTTTATAATAGTCGCTCTACAACAGTTTTCTTTAGCTGAATTC
TTTAACTACTATTGCAACAGTTTGTACATAGACTTTCAAG
Promoter Sequence
Complementary Strand

Consensus
CYCCNY: -370
>PAS_chr1-1_0217	Upstream Sequence Complementary Strand
GAAGCTTGAGCCACTAACGGAAACGTCAAAGGAGCGATCTCCGTTTACAGTGTTTCCGTT
TTGGCGCAGGTCAGTTGAAAGGGTGAGCGGATCTTTTGGAGAACCCTTAGAGTTACGGAA
GCTACAGCTTCGGGCATTAGTTGAGGGACTCGAGAAGAAGCCACCACAGTATTAGCTACA
AAGGCTGTTTGTAAGAGAAAAGTTCCAGCTACTGGAAGAGCAAACAAACAACAACAAGAA
GAAGGCTGTACTACACACTTTTGACTAACTTTAAATCATTTTACTGTTGAACCATAAAAA
GGACCATGAAGTTTATAGACGACACTTTTGCACGACGTTTAACGACAAGGAAAACTATGA
GTTAGCTACTTAAGCCCACTATAGAATAGAATTGTTCTCCCATCACAAGGCGACATATAT
ATGTTCAGCACACCTTTCCCGCACAGGTGCGCTTAAACTTGTCTGAAAGAAAGACGGGAG
GGAGGAGGATCCTTGCTAGATTAGAAGACGGAAGCGCTCCCATTACACGCCTGAGACTTA
CGCGACCGCTTGCGCGACGGATCGATCCACTCCTTCCGTCCACAATCCTGCATCGTTCAG
TTCACTTGGCTTGATCCCCATCGACACCTCTCCATGGTTCCGGTTAACTTTTTTATCGAC
GGCCTGTCATGCGAATTATATGCTCGTTGGTCGTTTCTCGTTCACTAAAGGTTTCACCAC
TCGGGATTAACGGGCCAGAATAGTGTCTAATTCGTAGGGGTGGGGTAGTGTGAAACGTTT
ATCGTTGGTTAGGGCGTATAATCGTTCTACGCGAGTGGCGAGCAGCGCAGGTGATATATT
AAGAGACGGTGGGAATTTAGGTATTCTACGCGTAATGGATTGATCCTAGAGCGAAAAAAC
CGGTTAGTTTTCAACCTAAAATATTATCAGCGAGATGTTGTCAAAAGAAATCGACTTAAG
AAATTGATGATAACGTTGTCAAACATGTATCTGAAAGTTC
w3c xhtml validator w3c css validator