N.C. Yeastract
K.phaffii
YEASTRACT+ INESC-ID IST IBB
Home > Search by DNA motif > Result > View in Promoter Contact/Credits     Tutorial     Help

 

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!
Standard Name PAS_chr3_0578
Promoter Sequence

Consensus
CYCCNY: -561 -548 -532 -523 -445 -387 -384 -259 -119
>PAS_chr3_0578    upstream sequence, from -1000 to -1, size 1000
TTGTTTTTGAGTCAATACATCATCCTATTCCCAGACATTTCATTGTCGAGGTTATCCGTC
ATCTGTCACCATCTCTAGTGATAGTAGGCTCCAAGGGAACCAGTGCTTTGAAAGGGGTCC
TTTTGGGGTCCCTGTCCAACTATTTAGTACGTAAGAGTACCGTACCTGTCATGGTAGTCA
AACGCAAGTTGAAGAAGCTGATCAAGAAGAAAGGAGCTGGTAAGTTCAACAACAACATCA
AACCATTACATACTCTTGCCGAGGCTCGTATCGACTAAGGCTTATGCGACACACATGTAC
ATGTCAAGATATCGGATGTCAGATGTTACCGAATCCATACTATTCAAATGCGAAATATTA
TTGATGTCGGATTTCGGCTATTTAGTGGCTCGCTTATCGTATACACTCACACCGCCTCGC
TCGCCTAGACTAAGAATTTCTCCTTCTAGACTCTCCACCTAGCTCACTCTCCGCTCTCTC
CGC
CTCGATCCTATTCGCTGCAAAAATAGCATTGAGGGGAACGGCATCCAAAATGTAAAC
ACAAACCCACCAAAACTCCTCTTCAAACCTCACAAAAAGGGGAGAACTAGTACAACAACC
AACAAAACTTAGTCCCCTCan>CTTTGGTTATATATAAGACTTAAGGAATCTCTTACTCTTTT
TTTCTCTTCTTCTTCTTCTTCTTTTCTTGACATATTCATTCGTTCTATGCATTTCATATA
AATTCAAGCCCGGCAGCACACCCCCATGTTGCACTTCCAGAACATACAGCCGTCGCGTCG
CACTATCAATCGTGTCTATTATAACACTCAACAGATTTCATCTATTGATTACCTACAACA
GCTTATCAACACCCATATATGGTCCAGGATCAAGTACCACGCTCCACCACCACCACCTGT
AAAGCAGCTGCACGAACCGAGTTGTCAAGTAACTGGTACTTCCTCACCAACCGCAGATTA
TTCACCGTCGCAACTCACCGACGCCATTCACCGTAACCAA
Promoter Sequence
Complementary Strand

Consensus
CYCCNY: -416 -418 -481 -784 -883
>PAS_chr3_0578	Upstream Sequence Complementary Strand
AACAAAAACTCAGTTATGTAGTAGGATAAGGGTCTGTAAAGTAACAGCTCCAATAGGCAG
TAGACAGTGGTAGAGATCACTATCATCCGAGGTTCCCTTGGTCACGAAACTTTCCCCAGG
AAAACCCCAGGGACAGGTTGATAAATCATGCATTCTCATGGCATGGACAGTACCATCAGT
TTGCGTTCAACTTCTTCGACTAGTTCTTCTTTCCTCGACCATTCAAGTTGTTGTTGTAGT
TTGGTAATGTATGAGAACGGCTCCGAGCATAGCTGATTCCGAATACGCTGTGTGTACATG
TACAGTTCTATAGCCTACAGTCTACAATGGCTTAGGTATGATAAGTTTACGCTTTATAAT
AACTACAGCCTAAAGCCGATAAATCACCGAGCGAATAGCATATGTGAGTGTGGCGGAGCG
AGCGGATCTGATTCTTAAAGAGGAAGATCTGAGAGGTGGATCGAGTGAGAGGCGAGAGAG
GCGGAGCTAGGATAAGCGACGTTTTTATCGTAACTCCCCTTGCCGTAGGTTTTACATTTG
TGTTTGGGTGGTTTTGAGGAGAAGTTTGGAGTGTTTTTCCCCpan>TCTTGATCATGTTGTTGG
TTGTTTTGAATCAGGGGAGGAAACCAATATATATTCTGAATTCCTTAGAGAATGAGAAAA
AAAGAGAAGAAGAAGAAGAAGAAAAGAACTGTATAAGTAAGCAAGATACGTAAAGTATAT
TTAAGTTCGGGCCGTCGTGTGGGGGTACAACGTGAAGGTCTTGTATGTCGGCAGCGCAGC
GTGATAGTTAGCACAGATAATATTGTGAGTTGTCTAAAGTAGATAACTAATGGATGTTGT
CGAATAGTTGTGGGTATATACCAGGTCCTAGTTCATGGTGCGAGGTGGTGGTGGTGGACA
TTTCGTCGACGTGCTTGGCTCAACAGTTCATTGACCATGAAGGAGTGGTTGGCGTCTAAT
AAGTGGCAGCGTTGAGTGGCTGCGGTAAGTGGCATTGGTT
w3c xhtml validator w3c css validator