N.C. Yeastract
K.phaffii
YEASTRACT+ INESC-ID IST IBB
Home > Search by DNA motif > Result > View in Promoter Contact/Credits     Tutorial     Help

 

Back to top top

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!
Standard Name PAS_chr3_1002
Promoter Sequence

Consensus
CYCCNY: -850 -691 -502 -279 -261 -258 -224 
>PAS_chr3_1002    upstream sequence, from -1000 to -1, size 1000
GTTCAAATTGGGAGGTGGCAACTGCTGGTTATAAGCAGAGGAGTCCCTATTTTCCAGACC
CGGTTGTTGGTGTTGTGGCTGATGTTGTTGTTGCTGTTGTTGCTGAAGAAGACGATCGCG
TTTCTCCAATTCTTGTTTATAACGAAGTATCTCCTTTTCATAGGCGTCTTTCATCTTTCT
GTGAGCTACATCAAGTTCGTAAACAGCATTTCGAATGTTTTGAAGTTCTCTATTCTGCTG
TGTAAACTTCATTTCCACTTCATCCTGGTGCAACTTGTAAAAAGAGGTTTCGCTGGATAA
GTTTTCAAACTCCTTCTTGATGCCTTGAAGCAGATCCTCCAATCTCTGCCGGGATTGCTG
ATTGGCGACACTGGTAGTGTTAGGCAATGGTCTGTTGTACGACATTTGGGTTTCGAATAA
CAGGAAAAAGAAGCTCTAGACGAAAACTACCCAAGATTTGACCACATATTGGTTAACACA
CACTGGGGATGTACAAAACCCCTCGCGTCTACCGTTAGAGCGAAATCCGATAAGGTTCCC
AGGGCGGAAGAAGTGACAGGGTTCTAGAATCAGTACTATTCATGAAGGGTCATTAAGCCA
ACAGGGACGTTTTCAACTGACGAGAAATAACTATTCTGGGCAATTTTTACTGTAGATTTC
TGGACTCATTTTAGGTGTGTTTTCTTTTTTTTATTTTTGACGAGGAAAGCCCCAGCACAT
TCTCCCTTTTTTGATGTGTCCCCTCan>CTCGGAAAATTAATAGTGGGGGTGTAAAACACCCC
GTCTGCATTTTATTGCCCAGTTCCACGTATCTCCGATTTTAAGTTGGTGTGTTTTCCACA
ACAGGAAGAGTGTTGTAGTAGCATTGTGGTGGGTAGTCTCTTTTCTTTTTTTTGTTGTTT
TTTCTTCGTTCGCGTTCTAGCAAAATGGTTTCAGACACGAATACATCACTCTGATTACAT
AAACATCGCTCAAAAGATATTTCACTTCCCTTTATTCATC
Promoter Sequence
Complementary Strand

Consensus
CYCCNY: -234 -957 
>PAS_chr3_1002	Upstream Sequence Complementary Strand
CAAGTTTAACCCTCCACCGTTGACGACCAATATTCGTCTCCTCAGGGATAAAAGGTCTGG
GCCAACAACCACAACACCGACTACAACAACAACGACAACAACGACTTCTTCTGCTAGCGC
AAAGAGGTTAAGAACAAATATTGCTTCATAGAGGAAAAGTATCCGCAGAAAGTAGAAAGA
CACTCGATGTAGTTCAAGCATTTGTCGTAAAGCTTACAAAACTTCAAGAGATAAGACGAC
ACATTTGAAGTAAAGGTGAAGTAGGACCACGTTGAACATTTTTCTCCAAAGCGACCTATT
CAAAAGTTTGAGGAAGAACTACGGAACTTCGTCTAGGAGGTTAGAGACGGCCCTAACGAC
TAACCGCTGTGACCATCACAATCCGTTACCAGACAACATGCTGTAAACCCAAAGCTTATT
GTCCTTTTTCTTCGAGATCTGCTTTTGATGGGTTCTAAACTGGTGTATAACCAATTGTGT
GTGACCCCTACATGTTTTGGGGAGCGCAGATGGCAATCTCGCTTTAGGCTATTCCAAGGG
TCCCGCCTTCTTCACTGTCCCAAGATCTTAGTCATGATAAGTACTTCCCAGTAATTCGGT
TGTCCCTGCAAAAGTTGACTGCTCTTTATTGATAAGACCCGTTAAAAATGACATCTAAAG
ACCTGAGTAAAATCCACACAAAAGAAAAAAAATAAAAACTGCTCCTTTCGGGGTCGTGTA
AGAGGGAAAAAACTACACAGGGGAGGAGCCTTTTAATTATCACCCCCACATTTTGTGGGG
CAGACGTAAAATAACGGGTCAAGGTGCATAGAGGCTAAAATTCAACCACACAAAAGGTGT
TGTCCTTCTCACAACATCATCGTAACACCACCCATCAGAGAAAAGAAAAAAAACAACAAA
AAAGAAGCAAGCGCAAGATCGTTTTACCAAAGTCTGTGCTTATGTAGTGAGACTAATGTA
TTTGTAGCGAGTTTTCTATAAAGTGAAGGGAAATAAGTAG
w3c xhtml validator w3c css validator