N.C. Yeastract
K.phaffii
YEASTRACT+ INESC-ID IST IBB
Home > Search by DNA motif > Result > View in Promoter Contact/Credits     Tutorial     Help

 

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!
Standard Name PAS_chr4_0330
Promoter Sequence

Consensus
CYCCNY: -793 -401 -292 -291 -290 -287 -145 -95
>PAS_chr4_0330    upstream sequence, from -1000 to -1, size 1000
TCTAGAGACAAGACGCTTAAAAACACTTAATAGCGGGTTGTTGACAAGAGTTATGCCAGT
GCTTACAAAACTCAGGATGGATGACTGCCAGCTGGTACTGACATTCAGTCCCAATGTGGA
CGAGACCGAATGGGATATCTGATCTGTTGGGTTTTGGGATGTGGCGTGAAAACTGCTAGA
GCTTGACGGAGTTCCGATTTCCACGCTCTCCTCAGTAGCTCTTATTACATCATCGGTTAT
TAACTGATTGATTGAGTCTACTTGTGAGGACAACGAAGATCCATCTTTGGCCAATTGGGC
GGTCAAAACCAGACTGATAAGGGCAATAACGAGTTGTAGAAGACGGGATATCTTGGATGC
TGTTGAGATGTTCATTACCGTTTTCATCCCAGTATGAGAGGAACAGGAGATGAGCTGGAA
TTTGGAAACAGGAACGTTCAATTGCCAAGGAGAAGTTTGAGAGGAGAGAGTGGCAAAGAG
AATGGAGTCACTTCCTATCCATGCTTACAACAAGATCTCTGGAATATGACATACAACATA
GCAACAAAGAGGGGGTGCATCAAAAAAAATTACACGTTTTCCCACCCTTTCCAACGAACC
CCCAC
ACCAGTGAGGTGAACAGATTTAACGGGTCTCAGATAAACGAAAAAATGCTAACAA
TACCATCTATCGTGAGGGGGCGGCCCACTGCCACATTTCCAAAAGATACCCCCCspan>Tspan>Can>CGCT
TCAGATTGTAATTGTCTGTTTTATAGTACTGCAGTGAAGCGCCACAGCTCCAAAACTTAA
TTTGACTTCTTTATCAATTACCGTAATATTAGTCGGGCCTTGCCGCATCACGTGACCCGA
TTTCACTATAAAACTCTCCGTTCCCATAAAGTTTTACCACATCACGTGAGTTGTCAACAT
TGAAACCCCTCGATGTAATGCTTCACAGGTTGGTTATTTAAATCATCCAATCGCCGACCA
AATGAAATGATTTCTAACGTTTCCTTATTCACATACAAAG
Promoter Sequence
Complementary Strand

Consensus
CYCCNY: -320 -321 -445 -446 -513 -534 -548 -809
>PAS_chr4_0330	Upstream Sequence Complementary Strand
AGATCTCTGTTCTGCGAATTTTTGTGAATTATCGCCCAACAACTGTTCTCAATACGGTCA
CGAATGTTTTGAGTCCTACCTACTGACGGTCGACCATGACTGTAAGTCAGGGTTACACCT
GCTCTGGCTTACCCTATAGACTAGACAACCCAAAACCCTACACCGCACTTTTGACGATCT
CGAACTGCCTCAAGGCTAAAGGTGCGAGAGGAGTCATCGAGAATAATGTAGTAGCCAATA
ATTGACTAACTAACTCAGATGAACACTCCTGTTGCTTCTAGGTAGAAACCGGTTAACCCG
CCAGTTTTGGTCTGACTATTCCCGTTATTGCTCAACATCTTCTGCCCTATAGAACCTACG
ACAACTCTACAAGTAATGGCAAAAGTAGGGTCATACTCTCCTTGTCCTCTACTCGACCTT
AAACCTTTGTCCTTGCAAGTTAACGGTTCCTCTTCAAACTCTCCTCTCTCACCGTTTCTC
TTACCTCAGTGAAGGATAGGTACGAATGTTGTTCTAGAGACCTTATACTGTATGTTGTAT
CGTTGTTTCTCCCCspan>CACGTAGTTTTTTTTAATGTGCAAAAGGGTGGGAAAGGTTGCTTGG
GGGTGTGGTCACTCCACTTGTCTAAATTGCCCAGAGTCTATTTGCTTTTTTACGATTGTT
ATGGTAGATAGCACTCCCCspan>CGCCGGGTGACGGTGTAAAGGTTTTCTATGGGGGGAGGCGA
AGTCTAACATTAACAGACAAAATATCATGACGTCACTTCGCGGTGTCGAGGTTTTGAATT
AAACTGAAGAAATAGTTAATGGCATTATAATCAGCCCGGAACGGCGTAGTGCACTGGGCT
AAAGTGATATTTTGAGAGGCAAGGGTATTTCAAAATGGTGTAGTGCACTCAACAGTTGTA
ACTTTGGGGAGCTACATTACGAAGTGTCCAACCAATAAATTTAGTAGGTTAGCGGCTGGT
TTACTTTACTAAAGATTGCAAAGGAATAAGTGTATGTTTC
w3c xhtml validator w3c css validator