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Locus Information
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| Standard Name |
RAT1 |
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| Systematic Name |
C4_01080W_A |
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| Alias |
C4_01080W, C4_01080W_B, CA3242, CaO19.12150, CaO19.4681, CAWG_03673, Contig4-2949_0009, Contig4-2949_0010, IPF22542.1, IPF7491.1, orf19.12150, orf19.4681, orf6.5455 |
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| Allele |
C4_01080W_B |
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| Strain |
SC5314 |
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| Description |
Verified ORF; (orf19.4681) 5'-->3' exoribonuclease; similar to S. cerevisiae nuclear exoribonuclease Rat1p; suppresses S. cerevisiae kem1 mutant slow growth, mating defect, and haploid invasive growth defect |
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| External sources |
Open in CGD 
Open in KEGG
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Gene Sequence
Download FASTA
Hide Seq |
>RAT1 C4_01080W_A
ATGGGTGTCCCAGCTTTATTTAGATGGTTATCTCGAAAATATCCAAAAATTATTTCCCCA
GTAGTAGAGGAAGAAGACCATGAAATTGGTGGTGCCAAATATGAAAACCCCAACCCCAAT
GGAGAAATTGATAATTTGTATTTAGATATGAATGGTATTGTTCATCCATGTTCTCATCCT
GAACATAAAAAGCCACCAGAAACTGAAGATGAAATGTTTTTAGATATTTTTAAATATACT
GATAGAGTGCTCATGATGGCTAGGCCAAGAAAGGTTTTAATGATTGCTGTTGATGGGGTC
GCACCAAGAGCGAAAATGAATCAACAAAGAGCAAGAAGATTCCGTGCTGCTAAAGATGCA
GAATTGAAAGCAAAACAACTCGAAATTGAAGTTCAAGAAAGAGAATTACGTGGTGAAATT
ATTAATGATGCAATCAAGGGGAAAAAACAATGGGATTCTAATGCCATTACTCCAGGAACT
CCATTTATGGATAGATTAGCAGAAGCTTTAAGATATTGGGTAGCTTATAAATTAAGTTCT
GATCCAGGTTGGGCTAATTTACAAGTTATTATTAGTGATGCAACTGTTCCTGGTGAAGGT
GAACATAAATTGATGAGTTTTATTCGACTGCAAAGATCCGATCCCCAATATGATCCAAAC
ACCAAGCATTGTATCTATGGATTGGATGCCGATTTGATTTTCTTAGGATTGGCAACTCAT
GAACCCCATTTTAGAGTTTTAAGAGAAGATGTTTTTGCCTCACAAGATAAAAAGTTTACT
ATCAAAGATCAAATTGCCGATGCAAATTCCAATGGTGATACAGTAGCAAAAGAAGATAAA
AAACCATTCTTATGGTTACATGTCAACGTGTTGCGTGAATATCTTCAAGTTGAATTATTC
ACTCCGAGAATGTCTTTCCCGTTTGAATTAGAGCGTGCAATTGATGATTGGGTATTTCTT
TGTTTCTTTGCTGGTAACGATTTCTTGCCTCATTTACCAAGTTTAGATGTTAGAGATAAT
GGTATTGACACTCTTGTACAATGTTGGAAAAGAAGTTTGCCAATTTTAAAAGATTATGTT
ACATGTGATGGGAAATTGAATTTGAAAAGTGTTGAAGTTTTGATGTCTAATTTGGCTTAT
AAGGAAAGCGAGATATTTAAAAATAAACATGCTGCAGAACAAAGAAGAGAAGAAAACAAT
AAGAGAAGGAAGTTGGCTCAAGAACAGGAACGAGCTCTTAAGCGTGTTTATCTGTCGCAA
GTGTCAAAAGGGAAAGATAAAGCACCTCTAACTGCCGATGTCAATATGCCATTGATGGAT
ACGCTGGGTCAAAATGTGGAAGGATACGCCAATTTAACAAATAGTGATATTGTTCAAAAT
AGAGCTATTTTGACTAAAGCCAACTTGGCTAATAGTGATGCTGCAGCCGAATTGAAAAAA
TTGATCGATTCCAAAAAGACTCAAGTCACTGTTGTTCAAGATCAAATAGCTACCGATTCT
TCTGCTAATTCAGAAACAACTACTTCAGAATCAGAATTGGAAGAAATTCAAAGCGACAAC
TCTCTCAAAAGAAAATTGGAACCTGAAGAAGACAAACAGACACAAAGTGATGATATTAAA
TTATGGGAACCAGGATACAATAAACGTTATTATGAAGCCAAATTTCACTGTCAATCTGAT
GAAGAAATCGAACAAACAAAAAGAGATGTTGTAAGACATTATGTTGAAGGGATTGCATGG
GTAGCATTATATTATTATCAAGGATGTCCATCTTGGAACTGGTATTTCCCCTATCATTAT
GCTCCTTTTGCAGCAGATTTTACTAACCTAGAGGAGTTATTCCCAGAAGGTGTAAAGTTT
AAATTAGGTGAACCATTTAGACCATTTGAACAATTGATGTCTGTTTTACCAGCTGCTTCT
GGACATACCTTACCTCAAGTTTTCCGTGATTTGATGTCGAATCCCGATAGTGAAATTATT
GATTTTTATCCTGAAGAATTTGAAATTGATATGAATGGGAAGAAAATGAGTTGGCAAGGT
ATACCGTTATTGCCATTTATTGATGAAAAACGATTGTTAGATGCGGTACAGAAAAAATAT
GAATTGTTAACTCCAGATGAAAAATCAAGAAATACTAATAAGGAAGCAGAATTATTTATA
TCTCCAGCAAATAAGAATTTTTCCAAATTTTCAGAAAAATTATATAAAGAAAATGAAAAT
GAAGTGACTTTCAAATATGCAAAGAGTGGACTTTCTGGAAAAATTTTTAAATTGGGAACG
TTCAATCCCGAAGGGGTGTTTAATTTTCCCTTGAATGAAGGTTATATGCCCAATGTCAAT
AATAGTGACTATTTCCAAGCTATTTATCATTTCCCTAAAACCAAGACGGGTAAATCAATG
ATATTGAATGGACATATAGCACCATTGCCCGCATTGACAACTGCGGATAAGAATGATCTT
CTATATCAATTGGACAAGTTCAATAATAGAAGAAATGGTGGAAGATTTAATTCTACTTTA
GATAATAGTGATTATATCAACAAGGGTCCTGCTGGTAAAGAATTATACAAGACTTATTCT
ATGAGAAGAGGTGGGTATAGATCATATTTACAGTACTTAACTAACGGACATCATCCTGAT
CATCAACTGCAAAATAGTCAGTATTTGTCGTATGGTCAACAAAAGCCATATGGCGGACAA
GGGTCATATAATCAACAGGGTTATTATAATCAACAAGGTCGTTATAATCAACAGGGGAAT
AACTACAATCAACAAGGTCGTTATAGTCAACAAAGTCAATATAATCAATATCGATCCAAC
ACCCAAAGATTCAACAACAACCAAAACTACAATCAATCATCAAACAATTCAAGATCTGGT
TATCTTCCTCCTAGACCACAACGCTAG |
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Promoter Sequence
Download FASTA
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>RAT1 C4_01080W_A
AGCTGCTCAAGGTGCATTGGCTGCTATCTTTTTGTCTGGTACAGGTTGGACTATGGGTTT
CAATTCCGTTCAATATCTTATTGGTGCAGAAATCTTCCCCTTGGGTATTCGTTCTTTTGC
ACAATCATTGGTGATGGTGTTACATTTTGCTAATCAATATGGTAATTCTAAGGCATTACC
TAAAATGATGCTTGCCATGCATCCATACGGTGCCTTTTATTTCTTTGTCGGAGTCATGAT
TATTGGTCTTGTCTACGCATTCTTCTTACCAGAATTAAAAGGTCGTAGTTTGGAATCAAT
TGAAGAAGTTTTCACATTACCTTGGTATAACTTGAGACATTGTAATAGACTTATTGCAGA
TCATTCTCAAATTCACAAAATCAAATACACCCATGACGAGCAAGGTAATACTGATTTCAA
CCATATTCAATATGAACTCGATAGTGGTAAGCCAACAGATCAATTTGTTGAAAATTTAAT
GGAAAGTGAATCTGTTAATAGAGAAAGTGTTGGACATAAAGTTTAGGTTTTATTTTTATT
TCTTAGATAGTAGACTATTCTAAATGACTTTTATTATGATTGTTAGTTTTATTTAATGCA
AGTGATGTTTTTATTCTTTATACTGATTTCGGTTTCTCTAGTAAAAGTTAATTCTCTAAA
ATTAGGCTAATATATGCATTAAGAATTTGTTACAAGTGTTCTAGATATCTAAATAGTCTA
TTCGTACTTTGCTGTCTGGTTAAGCAATTGGTTCTTTACACCACCAAGCTCGGACCAAAT
TGTTGGTTTCCAGAACGATCCAATAACTGCATAGAGGGGAGCAGGCGCGCGCGCATAGAC
CTCAAACCACACTGTAAGTGGAGGAAGAAGAAGAGAAAAAAAAACTTCAACACTGCCGAA
GCTCATCATCATCAAAGCAAAAAAAAAAACTAGAGAAACTCATCATCTCTTGCTTATTCT
TTAATCTAACCACTAAATAATCAACTAACCAACTAACAAC
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| Chr coordinates |
Ca22chr4A_C_albicans_SC5314:219421-222327W |
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