Locus Information
Locus Info
Protein Info
GO Info
Orthologs
Standard Name
C4_03230C_A Systematic Name
C4_03230C_A Alias
C4_03230C, C4_03230C_B, CA3330, CaO19.2669, Contig4-2757_0014, Contig4-3083_0024, IPF12161.2, orf19.2669, orf6.5565, POL21.3, POL21.3f Allele
C4_03230C_B Strain
SC5314 Description
Uncharacterized ORF; (orf19.2669) ORF in retrotransposon Tca4; similar to Pol region of retrotransposons encoding reverse transcriptase, protease, integrase; downstream of RHD2, similar to the Gag region encoding nucleocapsid-like protein; rat catheter biofilm induced External sources
Open in CGD
Open in KEGG
Gene Sequence
Download FASTA Hide Seq
>C4_03230C_A C4_03230C_A
ATGAACAATAAAGTAGAAAGAGTTAACTATGTCAGCATACACAACATCAAACAAGAAGTG
GCAGACAAATATATGATAAAAGATCTTTACTACTATCATTTATTAATTAATCACCTTTCA
CATGAAAAACTACAATTATTAGTAAAAAGGGGAGTGATTAAACCAGTCAAATCTACTTCG
GCTGAGTCGGCCATTTTAAATTGTCAGATATGTGTTGCAGCCCATGCAAAATTAGCTAGC
CATAATCACACTCAACAACGGGAATTGGAGCGACCATTACAACGCCTCCATTTGGATACC
GCCGGACCATTTACCTCAAATAAAACTAAGAGCTATCTTACAACCGTGATTGATCAATTT
TCCAGATATACTGAAGTTATTGTATCTGACACCAAAGCAGTCAAACAAAGCATATTGCAT
AGACTTAGGGTCTGGAACAATAGATTTCAGTTTAAGATCGCGGAGATAAGATATGATAAT
GCATTGGAGTATCCATCGGCTGAGGAGTTAGAGGAGTTAGGAATTTATAAACACCTTCTC
CCAAACTACTCTCCTATGCTTAACGGTACAGCTGAAGCAACCAACCGCCCCATTGTCCAA
GGTATTTATAAGGTAGTGTTAAATTTTAGTTGTCAAGTATTAATACTTTTCCCATTTATA
GTGGAGTATGCGGTTCATATCCGGAATCATACACCTATAAAAGAATTTGATGGTGCTACT
CCTTATGAACGTTACTATGGTTTATCTAAATACGTCATACCATTTTTTCAGTTTGGAACC
GACGTTTTGATAAAATGTGCTAGTGTACAAGAAGCTATTTCATTAAAACTACCATCTTCA
AGAGATAAAGCTTTTCCTACAGTGATGTTTGGTGCTTTTCTCGGTTACGGCTCAGATTCC
TTTACCTTCAGAGTTTTAGTTTCCACGAAAGGATATCCAGTTATTACAACATCAAACATC
CGTCCAATAGCGACGATGCAAGTACTCAATGACTATTTGGCATACATATCGGAGAATAGC
TCAATAAGCTATGACGATACATTCTTATCACCTTTGAATCACCCAATGATTCGCACAAAC
CAACATGATAGACGTGGAGACAATATAAATGTCGAATATGAAAACCGTCCAAATGTACCA
TTTGAATATCATGCTGAACCTCCTCGTACAAATTCATCGACGGGAATTATCGATCGACCA
GATATTAGACCTAGAGCTGATCCCACCTGGCAACGTATGCCTGATGCCAACATACATCAG
GAAACAACAACTGTACAGACTCCTGATCATGGGGAGTTAGATACCATGATCAACAACGAA
CACCAACTACCACGATCTGGGGAGGGTAATTACCCCGGGCAACAGGTGCGCACCGATATT
ATTGGGCAATTTCGAGATCGCGGGCCTACCACTCTAAACACTCCGATCGATCTAGGTGTA
CCCGATGAAACAGACGATATTAGTATGACATCAGAGAATCCAATTGATTCCCCAAATTCC
GAGATGATCATATCCCCATCTTTACCCACAAATGAATTGGAACATCAAATCGATATCAGT
TCAGGGGAGATGTCGTTATTGCAAACGAATATGGAAGCAGATAACGAATTGAAAACAAAT
GAAATGGTATTATACAAATCAAAAAATGATGGTATTATCATTCAACAACAACAATTCACT
GAAAATTTGTCAGATGAAAATGAAGAAGATTCATCAACAGATGAGGAAACATTGGAAGAC
AAAAAACAACAGCGATTGGAATATAATATTTCACCAAACGATGAGTGGATAAATAATGAC
GTTCAGAACGAAGATGACACACAAGTGCCACATGTTAAGGAACCAATCAATTATGAAACT
CAAAGTAGAAATGAAACAAACATGCCACGAATTGAAATGGGCATAATAGAAAACTTAAGT
GATGATGGAAAGAATACACCACGTGAATTACGTATGGTCACCTACGATAATAATAAAAAA
ATTCAAAAGTACCAAAACAGTAATATCGAGATCCTGGAACCCAGAAACGAAAATAAAAAC
CACACATTCATTGAAAGCAACTTAGAATTACTTGACAATCAAGAAATGTTTCAAGAAGAT
CCTCAAGTTGAAGATATTCGATTGACAACTCCAAAAAAGGACAAATCGTTATCACCTGAT
TTCAATCAAACCCATAATGAAATACAACTATTCATGGCAGATATCAATGAAGATATGCTA
GAAGAATATGATGAAAATATAAATATGAATGAAGTGTTAGCTGACTCCACGGAGACGTTG
GACAAAGAATTAGATTTAGATGAAGAAAGTGGAAGGATCGAATATATTGCTGATAGAGTT
AGAAAAAAGAACAGAGGTACTGATGGTGCGCCACACGGGAAATATTTAAAGAAAAATGAT
AAAGATTTTGGTTCAATAAAAAGTCAGAAAAAATCTGACGCACAAATGGATGATGAAGTT
GGAATTGCTATTTCGAAGATCAGAAACTTTCCATTTAGATTGAAGGATGGACGAGCAAGT
TTCTTCCCTCCATATAAAACAAAATTTGGAAGATCAGTGCATCCACCTAAAAGATATTTA
AATGCCATTGTTAAGAAAATAGATTACAATCAAAAAGAATGGCGTCAAAGTATGGAAGAA
GAAATCGAAAAATTTAAGGCTAACCAAGTTTACACCGTTGAAAAAACACCAAAGAACGTT
GTCCCATTGAAAACCATGTGGGTACATACTTACAAAACCAATGACCTCAAAAATCATAAT
TACAAAAGCCGTTGCGTGGTAATGGGAAACTATATGGTCGAAAATCGTGATTTTGATCCC
CATGCCATCTCCTCCCCGGTAGTAGATCTCACAAGTATACGACTATTATCTGCCATAGCT
GTTGAAAATAACTTGGTTATGCACCAATTGGACATCGCCTCAGCTTATTTGAACGCCAGT
TTGGAGGATGGAAGAGTAATCTTTGTGAGACCACCGCGTGGTTTTGAGGTTAAACCTGGC
TATAGTTGGCGTTTACACAAGTCTGTGTACGGTCTTAGGCAGAGTGCCCATAATTGGTAC
TCACATTTTAAGAATGTGTTGGAGGCAAATGGTTTAAAACAAACACTACACAATGATGGC
ATTTTTTGGAAAAATTATGAAAATGGAGATGTATTATATGTGAGTGTATATGTGGATGAT
GTTTTTATGATAGCTACTAATGAAAAGATTATTAAAGAGTTTGTTGCTATGCTCGAAACA
TATTTTCAGTTACAATATTTTGGCGAGGCTACGGAGTATCTAGGAATACAGTTTAGAAAG
ACACCTGATGGATACACGTTAGACCAAATACCATTCTTGGAAAAATTGGTCGCTACATTC
AATATTCAAGATAGTTATGGAAAAGACATTCCTATTATCCCAAAAGATATTAATGTGGTC
AAGCAATTGAGAAAGTCAAGTCAGATAAATGATTTCGTTAAGTTGGAGAAACCTCAAAAG
TTAATCAATTCGGTGTCAAAAACCAAGTACATTGATGATTACGAAGAAAATGAAGAACAT
GATTTTAAAGAATCACCACAAGCTGAACCCTTAAGCGCAAAAGGAATAAAATTATACCAA
TCCGCAGTGGGACTGTTGTTATGGGCTTCGATGAACACTAGGCCAGACTTAGCTTTTAGT
GTGAATCAGCTCGGAGCAAAGTGTGCTCACCCAGATGTCGACGACTGGAAGAGATTGATG
TATTGCTTACGGTATATTAAGAAAGATATGGACTTCAAACTTGAATACAAGAGAGGAAGA
CTCAACAACAAGTCAAAAGATTTTATTATTGAATGTTTCTCAGATGCCTCATTTGCCCCA
GATTTGGACAGAAAGTCAATCACCGGGACAAGCATTTTTGTAAATGGGAATCTAGTTGCA
TGGGCAACAAAGAAACAAAAAATAATCACACATAGTTCAGCTGCTTGCGAAATGCTTGCA
TTAAATTATACCATATTGAAGGCATTTGATTTGAGAAATACCATTGAAGATCTAGAGTTA
AAAATAAGGAATTTGCATGTACATGAGGATAATCAAGCGGTCATTACAATCTTAAAGAAT
GATAATTTCCACCCACATAGACCGATTGATATATGTTACAAATTTCTCAGACAAAAATTG
AAAGATGGATTTTTTTCAATATCATATGTTGAATCTGGAGATAATTTAGCTGACTCATTC
ACGAAAGCTTTAGGAAGAAATAAATTGATTGAACATACCAAAAGGATTAGAGAAAGAAAG
GATTATGATAATAATGCTACACTGATAGTGGACGTTAGGACGCTCGAAGAGATTAAGATA
AACAAGAAATTGGTACATCATTAA Promoter Sequence
Download FASTA
>C4_03230C_A C4_03230C_A
ACTTGAAAGAGAATCAGCATTTTTGTTATGTCAACATTTAATGACCAATGACCACCAGCA
CGATGATATTATTCTTAAATTTCTCGTTAGCGGTGTCTCACCATGGTACTTACATCTGCA
AATTTACATGCTGTCATATAAACTTGGATTCTCAAATTTGTTTTTAGAGATTTATGCTCA
ACATTATGAATTGTATAAAGCAGATCCCATTTACAAATTGCCAGATAGTATGACATTGTT
GAATGAAATAAGATCAAATAGAGATTATCCTAAAGTGGTAAATGCTGCAAAAAATACAGT
ACAAGTCAATAATGTTTCATCCAAGAACAATAAAAAGAAGGATGAATGACAACAATTAGC
CAATAAAATTGAGGAAGTAGGACGTTATAGCGAAATAAACGCAACATCTACATATCATGA
AATTGGCGATACCAACAAAAACAAAGAACAATTAATATTGAATTTGAAAAATCATACAAA
ATTAAGTGAACAAAAGAAGAAAACAAACCTATTGGTATATGATCTGGGAGCCACAGTATC
CGTGGTGAATGATAAGACTTTACTTAACGACATTAAAGAATCAAATATCGAAATTGCAAC
TGCTGAAGGGGAGACATCTACGGCTTATGCTTTAGGTACTCTAACCATATCTGTGAATGG
ATTGAATGCGAAATTAGATGGTGTTCTATACTTGCCATCTATTCAATTAAACTTAATATC
TATAAAACAATTTGAAGATTTATGCTACGCAATTTTGATTTCCGAAAATTTAATGTTTCT
AGTTCACAGTGACCACGAACCTACGGTCATTGCGAAATATTCACCTAAAGATGACTTATA
CTCAGGCCCAAGATCGGGAAACTTTCTTAAGAAGAATCATAATGAACAAAACCAAATTTT
GCTTGACACTGCTAAAAAACTATTAGGATCAGAGAACATATTTCTGGAGAAATCACTGAA
AAATCCAATGATTGATCAAGGAAAATTAGATCCGTTGAAA
Chr coordinates
Ca22chr4A_C_albicans_SC5314:678610-674267C
