C.albicans - PathoYeastract

Regulation Reference(s)

The PathoYeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Mig1p	C1_04500W_A	PubMed Teunissen JHM et al., BMC genomics, 2017 Sep 6;18(1):701	Indirect	RNA-seq analysis - WT vs TF Deletion	Negative	SC5314	Unstressed log-phase growth (control)	Grown in YPD media at 37 °C in a shaking incubator at 150 rpm. Stock cultures were preserved in 35% glycerol and maintained at −80 °C. Transcription factor gene deletion.	-3.04939385847422
			Indirect	RNA-seq analysis - WT vs TF Deletion	Negative	SC5314	Stress	Grown in YPD media at 37 °C in a shaking incubator at 150 rpm. Stock cultures were preserved in 35% glycerol and maintained at −80 °C. Butyric acid was added to freshly relaunched overnight cultures, diluted down to an optical density at 600 nm of 0.1. Transcription factor gene deletion.	-0.746504227240323
			Indirect	RNA-seq analysis - WT vs TF Deletion	Negative	SC5314	Stress	Grown in YPD media at 37 °C in a shaking incubator at 150 rpm. Stock cultures were preserved in 35% glycerol and maintained at −80 °C. Acetic acid was added to freshly relaunched overnight cultures, diluted down to an optical density at 600 nm of 0.1. Transcription factor gene deletion.	-2.7598974213872
			Indirect	RNA-seq analysis - WT vs TF Deletion	Positive	SC5314	Stress	Grown in YPM media at 37 °C in a shaking incubator at 150 rpm. Stock cultures were preserved in 35% glycerol and maintained at −80 °C. Butyric acid were added to freshly relaunched overnight cultures, diluted down to an optical density at 600 nm of 0.1. Transcription factor gene deletion.	0.949352846566502
		PubMed Lagree K et al., PLoS genetics, 2020 Jan;16(1):e1008582	Indirect	NanoString wt vs TF mutant	Negative	SN152	Unstressed log-phase growth (control)	YPG growth at 37.C	N/A
			Indirect	RNA-seq analysis - WT vs TF Deletion	Negative	CW542	Unstressed log-phase growth (control)	Grown in a YPD medium for 4 h shaking at 225 rpm at 37°C. Transcription factor Mig2 gene deleted.Transcription factor gene deletion.	-5.17820684118497
		PubMed Mottola A et al., Molecular microbiology, 2021 Aug;116(2):483-497	Indirect	RNA-seq - wt vs TF mutant	Negative	SC5314	Unstressed log-phase growth (control)	YPD 3 hr 30.C	N/A
			Indirect	RNA-seq - wt vs TF mutant	Negative	SC5314	Unstressed log-phase growth (control)	YPD 3 hr 30.C	N/A