PathoYeastract
C.albicans
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The PathoYeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Sef1p C1_05520W_A PubMed external link Junier A et al., mSphere, 2022 Feb 23;7(1):e0077921Junier A et al., mSphere, 2022 Feb 23;7(1):e0077921 Indirect RNA-seq analysis - WT vs TF Deletion Positive pcz1 Ion/metal/phosphate/sulfur/vitamin availability Grown overnight in a complete minimal medium minus uridine (CM-U) at 25°C. The cultures were treated with 4 μM of calcium ionophore A23187. After 30 min of treatment, cells were harvested and frozen in RNAlater. Transcription factor gene deletion. 0.472561793976289
PubMed external link Xiong L et al., mSphere, 2024 Jul 30;9(7):e0037224Xiong L et al., mSphere, 2024 Jul 30;9(7):e0037224 Indirect RNA-seq analysis - WT vs TF Deletion Negative SC5314 Ion/metal/phosphate/sulfur/vitamin availability BPS: Cells were pre-cultured in liquid YPD (2% dextrose, 2% Bacto peptone, 1% yeast extract) rotating at 75 rpm at 30°C overnight. Cells were inoculated into 25 mL of pre-warmed (37°C) YPD + 500 µM BPS (bathophenanthrolinedisulfonate; iron chelator) at an initial OD600 of 0.2. Cultures were grown for 4 h with vigorous shaking (225 rpm) at 37°C, then harvested by vacuum filtration and immediately frozen at -80°C. -1.227614