C.albicans - PathoYeastract

Regulation Reference(s)

The PathoYeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Mig1p	C3_01930W_A	PubMed Teunissen JHM et al., BMC genomics, 2017 Sep 6;18(1):701	Indirect	RNA-seq analysis - WT vs TF Deletion	Negative	SC5314	Unstressed log-phase growth (control)	Grown in YPD media at 37 °C in a shaking incubator at 150 rpm. Stock cultures were preserved in 35% glycerol and maintained at −80 °C. Transcription factor gene deletion.	-1.40405857837944
			Indirect	RNA-seq analysis - WT vs TF Deletion	Negative	SC5314	Stress	Grown in YPD media at 37 °C in a shaking incubator at 150 rpm. Stock cultures were preserved in 35% glycerol and maintained at −80 °C. Butyric acid was added to freshly relaunched overnight cultures, diluted down to an optical density at 600 nm of 0.1. Transcription factor gene deletion.	-2.27409526848478
		PubMed Lagree K et al., PLoS genetics, 2020 Jan;16(1):e1008582	Indirect	NanoString wt vs TF mutant	Negative	SN152	Unstressed log-phase growth (control)	YPG growth at 37.C	N/A
			Indirect	RNA-seq analysis - WT vs TF Deletion	Negative	CW542	Unstressed log-phase growth (control)	Grown in a YPD medium for 4 h shaking at 225 rpm at 37°C. Transcription factor Mig2 gene deleted.Transcription factor gene deletion.	-6.20628315368421