PathoYeastract
C.albicans
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The PathoYeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Mig1p C3_04000C_A PubMed external link Teunissen JHM et al., BMC genomics, 2017 Sep 6;18(1):701Teunissen JHM et al., BMC genomics, 2017 Sep 6;18(1):701 Indirect RNA-seq analysis - WT vs TF Deletion Negative SC5314 Unstressed log-phase growth (control) Grown in YPD media at 37 °C in a shaking incubator at 150 rpm. Stock cultures were preserved in 35% glycerol and maintained at −80 °C. Transcription factor gene deletion. -1.25979909160377
Indirect RNA-seq analysis - WT vs TF Deletion Negative SC5314 Stress Grown in YPD media at 37 °C in a shaking incubator at 150 rpm. Stock cultures were preserved in 35% glycerol and maintained at −80 °C. Butyric acid was added to freshly relaunched overnight cultures, diluted down to an optical density at 600 nm of 0.1. Transcription factor gene deletion. -1.73434143392109
Indirect RNA-seq analysis - WT vs TF Deletion Positive SC5314 Stress Grown in YPM media at 37 °C in a shaking incubator at 150 rpm. Stock cultures were preserved in 35% glycerol and maintained at −80 °C. Butyric acid were added to freshly relaunched overnight cultures, diluted down to an optical density at 600 nm of 0.1. Transcription factor gene deletion. 0.65547727476668
Indirect RNA-seq analysis - WT vs TF Deletion Positive SC5314 Stress Grown in YPM media at 37 °C in a shaking incubator at 150 rpm. Stock cultures were preserved in 35% glycerol and maintained at −80 °C. Acetic acid were added to freshly relaunched overnight cultures, diluted down to an optical density at 600 nm of 0.1. Transcription factor gene deletion. 0.655239226723223
PubMed external link Lagree K et al., PLoS genetics, 2020 Jan;16(1):e1008582Lagree K et al., PLoS genetics, 2020 Jan;16(1):e1008582 Indirect NanoString wt vs TF mutant Negative SN152 Unstressed log-phase growth (control) YPG growth at 37.C N/A
Indirect RNA-seq analysis - WT vs TF Deletion Negative CW542 Unstressed log-phase growth (control) Grown in a YPD medium for 4 h shaking at 225 rpm at 37°C. Transcription factor gene deletion. -1.66846224518315
Indirect RNA-seq analysis - WT vs TF Deletion Negative CW542 Unstressed log-phase growth (control) Grown in a YPD medium for 4 h shaking at 225 rpm at 37°C. Transcription factor Mig2 gene deleted.Transcription factor gene deletion. -4.90337168619235