The PathoYeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Condition |
Bcr1p
|
C4_03570W_A
|
PubMed
Nobile CJ et al., albicans transcription factor Bcr1p, Curr Biol. 2005;15(12):1150-5Nobile CJ et al., albicans transcription factor Bcr1p, Curr Biol. 2005;15(12):1150-5 |
Indirect |
Northern blot - WT vs TF mutant |
Positive |
SC5314 |
YPD 30.C |
PubMed
Nobile CJ et al., albicans biofilm formation in vitro and in vivo, PLoS Pathog. 20;2(7):e63Nobile CJ et al., albicans biofilm formation in vitro and in vivo, PLoS Pathog. 20;2(7):e63 |
Indirect |
Northern blot - WT vs TF mutant |
Positive |
SC5314 |
Spider medium |
PubMed
Fanning S et al., Eukaryot Cell, 2012 Jul;11(7):896-904Fanning S et al., Eukaryot Cell, 2012 Jul;11(7):896-904 |
Indirect |
Microarray analysis - WT vs TF mutant |
Positive |
SC5314 |
Spider medium |
PubMed
Woolford CA et al., PLoS Genet, 2016 Dec 9;12(12):e1006487Woolford CA et al., PLoS Genet, 2016 Dec 9;12(12):e1006487 |
Indirect |
NanoString - WT vs TF mutant |
Positive |
SC5314 |
YPD growth, 37.C |
Indirect |
NanoString - WT vs TF mutant |
Positive |
SC5314 |
YPD growth, 37.C, 4h |
PubMed
Ellepola K et al., J Dent Res, 2017 Sep;96(10):1129-1135Ellepola K et al., J Dent Res, 2017 Sep;96(10):1129-1135 |
Indirect |
RT-PCR - WT vs TF mutant |
Positive |
SC5314 |
Biofilm in UFTYE medium supplemented with sucrose and in the presence of Glucosyltransferase B (GtfB), 24h, 37.C |
Indirect |
RT-PCR - WT vs TF mutant |
Positive |
SC5314 |
Mixed biofilm growth with S. mutans in UFTYE medium supplemented with sucrose, 24h, 37.C |
PubMed
Glazier VE et al., Curr Genet, 2018 Aug;64(4):883-888Glazier VE et al., Curr Genet, 2018 Aug;64(4):883-888 |
Indirect |
RT-PCR - WT vs TF mutant |
Negative |
SC5314 |
Biofilm-inducing media YETS |
PubMed
Huang MY et al., PLoS Pathog, 2019 May;15(5):e1007787Huang MY et al., PLoS Pathog, 2019 May;15(5):e1007787 |
Indirect |
NanoString - WT vs TF mutant |
Positive |
P57055 |
Hyphal growth (RPMI + 10% serum at 37°C for 4 hours) |
|