C.albicans - PathoYeastract

Regulation Reference(s)

The PathoYeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition	Log2FC
Mig1p	C5_04470C_A	PubMed Teunissen JHM et al., BMC genomics, 2017 Sep 6;18(1):701	Indirect	RNA-seq analysis - WT vs TF Deletion	Positive	SC5314	Grown in YPD media at 37 °C in a shaking incubator at 150 rpm. Stock cultures were preserved in 35% glycerol and maintained at −80 °C. Acetic acid was added to freshly relaunched overnight cultures, diluted down to an optical density at 600 nm of 0.1. Transcription factor gene deletion.	1.32729483751715
			Indirect	RNA-seq analysis - WT vs TF Deletion	Positive	SC5314	Grown in YPM media at 37 °C in a shaking incubator at 150 rpm. Stock cultures were preserved in 35% glycerol and maintained at −80 °C. Transcription factor gene deletion.	0.562962850728302
			Indirect	RNA-seq analysis - WT vs TF Deletion	Negative	SC5314	Grown in YPM media at 37 °C in a shaking incubator at 150 rpm. Stock cultures were preserved in 35% glycerol and maintained at −80 °C. Butyric acid were added to freshly relaunched overnight cultures, diluted down to an optical density at 600 nm of 0.1. Transcription factor gene deletion.	-0.40962922967937
		PubMed Lagree K et al., PLoS genetics, 2020 Jan;16(1):e1008582	Indirect	RNA-seq analysis - WT vs TF Deletion	Positive	CW542	Grown in a YPD medium for 4 h shaking at 225 rpm at 37°C. Transcription factor gene deletion.	0.803161188690358
			Indirect	RNA-seq analysis - WT vs TF Deletion	Negative	CW542	Grown in a YPD medium for 4 h shaking at 225 rpm at 37°C. Transcription factor Mig2 gene deleted.Transcription factor gene deletion.	-0.282400460185979