PubMed
Böhm L et al., PLoS pathogens, 2017 Oct;13(10):e1006699Böhm L et al., PLoS pathogens, 2017 Oct;13(10):e1006699
Indirect
RNA-seq analysis - WT vs TF Deletion
N/A
SN250
Carbon source quality/availability
Grown on Todd-Hewitt agar at 37°C for 24 h. Trancription factor gene deletion.
-0.411504115
PubMed
Reuter-Weissenberger P et al., mBio, 2021 Dec 21;12(6):e0302021Reuter-Weissenberger P et al., mBio, 2021 Dec 21;12(6):e0302021
Direct
ChIP-seq
N/A
SC5314
Unstressed log-phase growth (control)
YPD broth overnight at 30.C
N/A
Indirect
RNA-seq analysis - WT vs TF Deletion
Negative
SC5314
Unstressed log-phase growth (control)
Grown in YNB medium at 30 ºC for 6h in a shaker with 220 rpm. Transcription factor gene deletion.
-0.337546233818158
Indirect
RNA-seq analysis - WT vs TF Deletion
Negative
SC5314
Stress
Grown in YNB medium at 30 ºC for 5.5h in a shaker with 220 rpm. Treated with nigericin and incubated for 30 min further. Transcription factor gene deletion.
-0.552665134853262
Indirect
RNA-seq analysis - TF Over-expression vs WT
Negative
SC5314
Unstressed log-phase growth (control)
Grown in YNB medium at 30 ºC for 6h in a shaker with 220 rpm. Transcription factor gene overexpression.