C.albicans - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

C1_06700W_B

Promoter Sequence

Consensus
CCGTCGG: -548 -547 -546 -545 -544 -543 -542 -541 -540 -539 -538 -537 -536 -535 -534 -533 -532 -531 -530 -529

>C1_06700W_B    upstream sequence, from -1000 to -1, size 1000
CCCAAAAAACAAATTGACTTATCAACAGCAAGAAGAGCTATTAAGAAAAAAGGAAAAGGA
AATTGAATATTTCAGATCCATGCAACAACAGCAAAACTATCAGGTCAAACCAAAAGTCAA
TGATTCCAAACGGTTATCATTTCAACATACACATCATAGTAGTCCAGATGTTGCATCTAG
GCTCCATCAAATGGATTATACATCACCAACAAGCATAAAATCGCCATCTTATGGTGACGT
ACCACATTCTCAAAATGGCAAATATCAGCATTTGCTAAACAATTACGTCGCTACCTCGGA
TTCTACGCCAACAAAAACCAGCAAGAGGGCCACCATGGCCTCTTATGAACCAGAGTTTCT
TGATGAATTTGACGAGATTGCTAAAAAGAAAGCCCAGTTGGAAATTGAATTGGAGAGATT
AAAACAGTTGGAAAAATTATCCAAAAAGGCTGCNNNNNN</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>NAG
TGGGTCAGTCAATTCATATTCCGGGACTGACGACACCTCCAAGAAAAATTCCTCAAAAGA
TGACTTGAGTAAGAAGCTTTCTAGGTATGTCACCGACGAGGATGATGCTGGTTACGATTT
GCAATATTCAGCAAGTGGTGGTGATGAATCCCCACCTCCACCTCCACCTCCAAAACACAT
TACACCAAATAAGACTTATGGTTATGTGAGAGACGATCATTTTAATAAACCTACGCCACG
TGTTCCATTTGATGCTGATGATTTTAGAATATCTACAAACTCCCAGGGTGTCATAGATGA
AGAGGCGTACCTCAAGTTATCTTTAAAACAAGAAGAATTGAAAAACTCCATTAAATCATT
ACAAAGTGATGTTTTGAATTTGTCGGAATTAAGTGCTACTAGTGCTGGTTCATTTCTTAG
ACATAAATACGAAAAAGATTTACAAGCTAGTCAATTGGGTCTGAGTCATATTTCGGTGGA
AGAACGTCATGAAGAGGAACCAGACAAAACATCAGATGTT

Promoter Sequence
Complementary Strand

Consensus
CCGTCGG: -522 -523 -524 -525 -526 -527 -528 -529 -530 -531 -532 -533 -534 -535 -536 -537 -538 -539 -540 -541

>C1_06700W_B	Upstream Sequence Complementary Strand
GGGTTTTTTGTTTAACTGAATAGTTGTCGTTCTTCTCGATAATTCTTTTTTCCTTTTCCT
TTAACTTATAAAGTCTAGGTACGTTGTTGTCGTTTTGATAGTCCAGTTTGGTTTTCAGTT
ACTAAGGTTTGCCAATAGTAAAGTTGTATGTGTAGTATCATCAGGTCTACAACGTAGATC
CGAGGTAGTTTACCTAATATGTAGTGGTTGTTCGTATTTTAGCGGTAGAATACCACTGCA
TGGTGTAAGAGTTTTACCGTTTATAGTCGTAAACGATTTGTTAATGCAGCGATGGAGCCT
AAGATGCGGTTGTTTTTGGTCGTTCTCCCGGTGGTACCGGAGAATACTTGGTCTCAAAGA
ACTACTTAAACTGCTCTAACGATTTTTCTTTCGGGTCAACCTTTAACTTAACCTCTCTAA
TTTTGTCAACCTTTTTAATAGGTTTTTCCGACGNNNNNN</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>NTC
ACCCAGTCAGTTAAGTATAAGGCCCTGACTGCTGTGGAGGTTCTTTTTAAGGAGTTTTCT
ACTGAACTCATTCTTCGAAAGATCCATACAGTGGCTGCTCCTACTACGACCAATGCTAAA
CGTTATAAGTCGTTCACCACCACTACTTAGGGGTGGAGGTGGAGGTGGAGGTTTTGTGTA
ATGTGGTTTATTCTGAATACCAATACACTCTCTGCTAGTAAAATTATTTGGATGCGGTGC
ACAAGGTAAACTACGACTACTAAAATCTTATAGATGTTTGAGGGTCCCACAGTATCTACT
TCTCCGCATGGAGTTCAATAGAAATTTTGTTCTTCTTAACTTTTTGAGGTAATTTAGTAA
TGTTTCACTACAAAACTTAAACAGCCTTAATTCACGATGATCACGACCAAGTAAAGAATC
TGTATTTATGCTTTTTCTAAATGTTCGATCAGTTAACCCAGACTCAGTATAAAGCCACCT
TCTTGCAGTACTTCTCCTTGGTCTGTTTTGTAGTCTACAA