C.albicans - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

C6_01000C_B

Promoter Sequence

Consensus
CCGTCGG: -849 -848 -847 -846 -845 -844 -843 -842 -841 -840 -839 -838 -837 -836 -835 -834 -833 -832 -831 -830 -829 -828 -827 -826

>C6_01000C_B    upstream sequence, from -1000 to -1, size 1000
GAGTGCTTCATCACCACCAAATGCATTATTCAATGATTTTTCAAAATTGTTCTTAAACAT
ATTGAATGAGCTTTTGAGATCTTCTCTATTCTTTTCTCTGTCCGCTAGGATGAGATCTAT
AACGCCTATCAATTTATCAAATTTGCCTTAANNNNNNN</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N<br/>GTTGTTCGAATTAGTCATTTCATCCATTAATGTTCTGTAAAACTCAGTTAATATTCCCAT
ACACTTGTAAAATCTGATCTTTAGCAAATGGTAAACTTACTTGATGGCATATATTTCTTA
TTTCTCTGTAGTAGCCACTGAAAGTTGTCCAGTATTGAGGCGACTTTTCCAATAACAAGA
TACAAGTGTCCAAATTCTGAGATCTGCATTCACTGGGATAAGATATTTCTGCATTTTCAA
ATTCACATATTGATAATTGTATTGCAATCAGTTTCTGTTGGAATGGGGAGATTGTCTCAA
TACCCTCAGCGCATTGATTTATTATTGGTTCCAACGCTTTTTTGGCACAATCATTTCTCC
AATTGTCTGACAATTCAAACTTGAAATCACCAAAAAGCTGTAAATCGTGTGCAACAACCA
TGACCAAACAATGAATAAGCAAGACAATAATCATTGACTTTGTTGAGTAGTTTGATCAAA
TACAGCATTTCACTGGAAATATTGGTTGTATTATATGACTGGCATAACGGTCAGTTGGAC
AAACTTCAAACAATTCTGAAACATGTCTGATTTGGAGTTTATACTACCATCACATAGTCT
ATTCATTCTATTCAAACAATTCTATCAATAGAGTAATTCTTTTGAAAGTCATTATTGGCA
GATCTGTTGAGTGTTAACGTAAAAATATTAAAATGGTTTTGACAAGAACTTTGAAAGAAA
CAATTCGGAAGAATATTTTGGTGGAGAAAAAAATATACAAAACTGCTGTGAAAAATTTTA
AAAACCAAGCCTAAGCTCCTATATCTGAAAAGTATCTTCC

Promoter Sequence
Complementary Strand

Consensus
CCGTCGG: -819 -820 -821 -822 -823 -824 -825 -826 -827 -828 -829 -830 -831 -832 -833 -834 -835 -836 -837 -838 -839 -840 -841 -842

>C6_01000C_B	Upstream Sequence Complementary Strand
CTCACGAAGTAGTGGTGGTTTACGTAATAAGTTACTAAAAAGTTTTAACAAGAATTTGTA
TAACTTACTCGAAAACTCTAGAAGAGATAAGAAAAGAGACAGGCGATCCTACTCTAGATA
TTGCGGATAGTTAAATAGTTTAAACGGAATTNNNNNNN</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N<br/>CAACAAGCTTAATCAGTAAAGTAGGTAATTACAAGACATTTTGAGTCAATTATAAGGGTA
TGTGAACATTTTAGACTAGAAATCGTTTACCATTTGAATGAACTACCGTATATAAAGAAT
AAAGAGACATCATCGGTGACTTTCAACAGGTCATAACTCCGCTGAAAAGGTTATTGTTCT
ATGTTCACAGGTTTAAGACTCTAGACGTAAGTGACCCTATTCTATAAAGACGTAAAAGTT
TAAGTGTATAACTATTAACATAACGTTAGTCAAAGACAACCTTACCCCTCTAACAGAGTT
ATGGGAGTCGCGTAACTAAATAATAACCAAGGTTGCGAAAAAACCGTGTTAGTAAAGAGG
TTAACAGACTGTTAAGTTTGAACTTTAGTGGTTTTTCGACATTTAGCACACGTTGTTGGT
ACTGGTTTGTTACTTATTCGTTCTGTTATTAGTAACTGAAACAACTCATCAAACTAGTTT
ATGTCGTAAAGTGACCTTTATAACCAACATAATATACTGACCGTATTGCCAGTCAACCTG
TTTGAAGTTTGTTAAGACTTTGTACAGACTAAACCTCAAATATGATGGTAGTGTATCAGA
TAAGTAAGATAAGTTTGTTAAGATAGTTATCTCATTAAGAAAACTTTCAGTAATAACCGT
CTAGACAACTCACAATTGCATTTTTATAATTTTACCAAAACTGTTCTTGAAACTTTCTTT
GTTAAGCCTTCTTATAAAACCACCTCTTTTTTTATATGTTTTGACGACACTTTTTAAAAT
TTTTGGTTCGGATTCGAGGATATAGACTTTTCATAGAAGG