C.albicans - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CR_09500C_B

Promoter Sequence

Consensus
CCGTCGG: -75 -74 -73 -72 -71 -70 -69 -68 -67 -66 -65 -64 -63 -62 -61 -60 -59 -58 -57 -56 -55 -54 -53 -52 -51 -50 -49 -48

>CR_09500C_B    upstream sequence, from -1000 to -1, size 1000
CTTCGAGAAAATAATAAAGATTTAGTAGAAAACATTCATGCGGTATCAATTGGTCCATTA
AAATCACAAGACATTTTACGTACTGCATTAGCTAAAGGAGCTGATAATTCAACATTAATT
GAAACATCAAATGATTCAGTTAATAATGATGTTGAACCATTACAAGTTGCTAAATTGATT
AAAAAAATTGTTGAAAAAGATAATTCTAATTTAGTCATATTAGGGAAACAATCAATTGAT
GATGATTTTAATCAAACTGGACAAATATTAGCAGGATTATTAAATTGGCCTCAAGCTACC
AATGCATCGAAAATTGAAATTGAAATTGATAATGATAATGAAAATAATCAAGTTTTAGTT
ACGAGAGAAATTGATGGTGGTGAAGATATTTTGAAAAGTAAATTACCAATGATTATAACT
ACTGATTTAAGATTAAATGAACCAAGATATGCATCATTACAAAATATTATGAAAGCTAAA
AAGAAACCATTAACAAAATTGAAACCTCAAGATTTAGGTATTGATAAAATTGAAAATAAA
TTGGAAATTTTGAAAATTGAAGAACCACCAATTAGACAAGCAGGTGTTAAAGTTGATAAT
GTTGATCAATTGATTGAAAAATTAAAAGAATTAAAAGCCATTTAAAGGGAAAAGTATTAC
TTTGTTAGAGAGTTATTGCTTATGTTTTTTTGGTTATATAAGTTGTTTACTTATAAGTAT
ATATATATATATAACATGTAATATATGTTAATTGTTAATTGATTGATTGATTGATTTATA
TTTACTTTGTAAAAACCGGGTAAAAAAAGAAATTAGAATTTTTTCTTCTTCTTCCCCAAA
CCTTGTAAATATTTTTTTTGACCTGACCTCTTTCAGACAACCTCAACCACAACCACCGCC
CCACACACACAAAAATATCGATTTTNNNNNNN</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>GC
AATTCTCTCCCCCACCCCCCCCCCAACCCCTCCACCCCAA

Promoter Sequence
Complementary Strand

Consensus
CCGTCGG: -41 -42 -43 -44 -45 -46 -47 -48 -49 -50 -51 -52 -53 -54 -55 -56 -57 -58 -59 -60 -61 -62 -63 -64 -65 -66 -67 -68

>CR_09500C_B	Upstream Sequence Complementary Strand
GAAGCTCTTTTATTATTTCTAAATCATCTTTTGTAAGTACGCCATAGTTAACCAGGTAAT
TTTAGTGTTCTGTAAAATGCATGACGTAATCGATTTCCTCGACTATTAAGTTGTAATTAA
CTTTGTAGTTTACTAAGTCAATTATTACTACAACTTGGTAATGTTCAACGATTTAACTAA
TTTTTTTAACAACTTTTTCTATTAAGATTAAATCAGTATAATCCCTTTGTTAGTTAACTA
CTACTAAAATTAGTTTGACCTGTTTATAATCGTCCTAATAATTTAACCGGAGTTCGATGG
TTACGTAGCTTTTAACTTTAACTTTAACTATTACTATTACTTTTATTAGTTCAAAATCAA
TGCTCTCTTTAACTACCACCACTTCTATAAAACTTTTCATTTAATGGTTACTAATATTGA
TGACTAAATTCTAATTTACTTGGTTCTATACGTAGTAATGTTTTATAATACTTTCGATTT
TTCTTTGGTAATTGTTTTAACTTTGGAGTTCTAAATCCATAACTATTTTAACTTTTATTT
AACCTTTAAAACTTTTAACTTCTTGGTGGTTAATCTGTTCGTCCACAATTTCAACTATTA
CAACTAGTTAACTAACTTTTTAATTTTCTTAATTTTCGGTAAATTTCCCTTTTCATAATG
AAACAATCTCTCAATAACGAATACAAAAAAACCAATATATTCAACAAATGAATATTCATA
TATATATATATATTGTACATTATATACAATTAACAATTAACTAACTAACTAACTAAATAT
AAATGAAACATTTTTGGCCCATTTTTTTCTTTAATCTTAAAAAAGAAGAAGAAGGGGTTT
GGAACATTTATAAAAAAAACTGGACTGGAGAAAGTCTGTTGGAGTTGGTGTTGGTGGCGG
GGTGTGTGTGTTTTTATAGCTAAAANNNNNNN</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>CG
TTAAGAGAGGGGGTGGGGGGGGGGTTGGGGAGGTGGGGTT