C.albicans - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

ORC1

Promoter Sequence

Consensus
CCGTCGG: -273 -272 -271 -270 -269 -268 -267 -266 -265 -264 -263 -262 -261 -260 -259 -258 -257 -256 -255 -254 -253 -252 -251 -250

>ORC1    upstream sequence, from -1000 to -1, size 1000
TCATTATTTCTTGTACTAACTCATTTATTAGAGTCGCCTTAAAAATTGGTTTAATTGGGG
ATTCCCAGATTGGCAAGACATCACTAATGGTGAAGTATGTGGAAGGTTCATTTGACGAAG
ACTATATTCAAACATTAGGGGTTAACTTTATGGATAAAAAGATACAAATTAGAAACACAA
CTATAACGTTCTCGATATGGGATTTAGGAGGACAAAAGGAGTTTATCAATATGCTACCAT
TGGTCTCAAATGATGCAGTGGCAATATTATTCATGTTTGATCTAACAAGAAAGTCTACGC
TAAATTCAATAAAGGAATGGTACAGACAGGTGAGAGGATTCAATAAGACGGCAATTCCCT
TTTTAGTGGGGACGAAGTATGATCAGTTTATTGATTTATCATTTCAAGATCAAATAGAGA
TTACACAACAAGCAAAGAAATTCGGAAGTGCGATGAAAGCTCCAGTCATATTTTGTTCAA
CTAGCCATTCTATTAACGTGCAAAAAATCTTCAAAATTATATTATCTAAAGCGTTTGACT
TAAAGTTAAACCTTGATGAAATTGTTAACGTGGGGGAACCCATATTGATATATAAGTAGT
TGGTGTAAAAAGCCACGTTCAAATTAAGTTCCATTCTTTAAACAATTCAATAGCTATTTA
TTACATAACTAGACATAATACGCTTATCATTGTTTATTATTATTACTATTATTATTATTA
TTATTATNNNNNNN</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>GTATTATTATTATTATTATTATTA
TTATTATTTTTACTATGTAGTTTTATTAATGTTATTATGAAGTTTTAATCTTACAAATAA
TTCAATTCTGTGCGAAGTATAATTAACAGTGGTAGAATGCCAAAAACAGAACCAAAAAAA
AACAACGCAGACAACTTGGTTTGATTCAGATTAACAAACAAAACCGTGCCAGTTTTTTCT
GATCGGTACAATCTCAACACAACCTTAGTTACATCCAAAT

Promoter Sequence
Complementary Strand

Consensus
CCGTCGG: -243 -244 -245 -246 -247 -248 -249 -250 -251 -252 -253 -254 -255 -256 -257 -258 -259 -260 -261 -262 -263 -264 -265 -266

>ORC1	Upstream Sequence Complementary Strand
AGTAATAAAGAACATGATTGAGTAAATAATCTCAGCGGAATTTTTAACCAAATTAACCCC
TAAGGGTCTAACCGTTCTGTAGTGATTACCACTTCATACACCTTCCAAGTAAACTGCTTC
TGATATAAGTTTGTAATCCCCAATTGAAATACCTATTTTTCTATGTTTAATCTTTGTGTT
GATATTGCAAGAGCTATACCCTAAATCCTCCTGTTTTCCTCAAATAGTTATACGATGGTA
ACCAGAGTTTACTACGTCACCGTTATAATAAGTACAAACTAGATTGTTCTTTCAGATGCG
ATTTAAGTTATTTCCTTACCATGTCTGTCCACTCTCCTAAGTTATTCTGCCGTTAAGGGA
AAAATCACCCCTGCTTCATACTAGTCAAATAACTAAATAGTAAAGTTCTAGTTTATCTCT
AATGTGTTGTTCGTTTCTTTAAGCCTTCACGCTACTTTCGAGGTCAGTATAAAACAAGTT
GATCGGTAAGATAATTGCACGTTTTTTAGAAGTTTTAATATAATAGATTTCGCAAACTGA
ATTTCAATTTGGAACTACTTTAACAATTGCACCCCCTTGGGTATAACTATATATTCATCA
ACCACATTTTTCGGTGCAAGTTTAATTCAAGGTAAGAAATTTGTTAAGTTATCGATAAAT
AATGTATTGATCTGTATTATGCGAATAGTAACAAATAATAATAATGATAATAATAATAAT
AATAATANNNNNNN</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>CATAATAATAATAATAATAATAAT
AATAATAAAAATGATACATCAAAATAATTACAATAATACTTCAAAATTAGAATGTTTATT
AAGTTAAGACACGCTTCATATTAATTGTCACCATCTTACGGTTTTTGTCTTGGTTTTTTT
TTGTTGCGTCTGTTGAACCAAACTAAGTCTAATTGTTTGTTTTGGCACGGTCAAAAAAGA
CTAGCCATGTTAGAGTTGTGTTGGAATCAATGTAGGTTTA