C.albicans - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

C1_00290W_B

Promoter Sequence

Consensus
DHGGWAATMNNWYCCV: -295 -293 -292 -291 -290 -289 -288 -287 -286 -285 -284 -283 -282 -281 -280 -279 -278 -277 -276 -275 -274 -273 -272 -271 -270 -125 -123 -122 -121 -120 -119 -118 -117 -116 -115 -114 -113 -112 -111 -110 -109 -108 -107 -106 -105 -104 -103 -102 -101 -100 -99 -98 -97 -96 -95 -94 -93 -92 -91 -90 -89 -88 -87 -86 -85 -84 -83 -82 -81 -80 -79 -78 -77 -76 -75 -74 -73 -72 -71 -70 -69 -68 -67 -66 -65 -64 -63 -62 -61 -60 -59 -58 -57 -56 -55 -54 -53 -52 -51 -50 -49 -48 -47 -46 -45 -44 -43 -42 -41 -40 -39 -38

>C1_00290W_B    upstream sequence, from -1000 to -1, size 1000
ATGGAAGAGTATGCCGAAGCAAGGAACATTAGTCTTGGTGGTAGTGAACTCACACGTCTT
TGTGCTAAGTACCTCACTGGGGAGGCCCTCATCTGGTATAAGGCATCTCAATTTAAATTT
GATAGATACCCTTGGGACAAGTTTTGTGATACGTTGAAAGATCGCTACCTTGATGCACGT
TTTGAAGCACAGCAGTTGAGAAATTTAACACATGGGATCCAGAAGCGTGATGTTAAGTCA
TATTCTGATGATTTCATTCAGCGTGCGAGGTATGTTCGCTCGGAGTGGAAGGACCCAACT
CTTTTGAAGGAATTCTATTATAGTGGGTTGAAACCTGAAATAAAAGCTTCCCTTGTCACT
GAAGCTGCTGATGATAGATATGGTTTGGATGATCTTATGTTAAAGGCTCAACAAATAGAT
GAAATTAGATACAAGGAAGGTAGAAGAAACCATAGTCCATCTCACAAGGATAAGTATCAA
TTTAGAAGTAACTTCAAAGGTGGTAATCGTTCTGGTGGTGAAGAAAGAGGCATTGATGCA
GATGGTGATACTATAATGGCCAACCTGATGCAATCCAAGAAATTGAGTTGGACTGAACGG
AAATTTTTAAAACAGAATAATGCCTGTTGTACTTGTTATCGTGTTGGATATAAGTCCTTT
GATTGCCCATATCGTAAGGACAACAAGAAAAATCCACCAAAACAGACNNNNNNNNNNNNNr/>Nan>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNNNNNNNNNNATCGGCTTCATTGATTATAACAATCTTAAATCTAT
GTTTGGCTCGCAGTTGGTTGGCAAAATCAACTTGTTCGGTACTGGCAACATCTTTCAATA
AATCCTGAATAACAACACGATCATTGTTGCCCATATCNNNNNNNNNNNNNN</span>NNNNNNNNN
pan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
pan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNNCTCTGTTTGATGAAGTTCCATTA

Promoter Sequence
Complementary Strand

Consensus
DHGGWAATMNNWYCCV: -20 -22 -23 -24 -25 -26 -27 -28 -29 -30 -31 -32 -33 -34 -35 -36 -37 -38 -39 -40 -41 -42 -43 -44 -45 -46 -47 -48 -49 -50 -51 -52 -53 -54 -55 -56 -57 -58 -59 -60 -61 -62 -63 -64 -65 -66 -67 -68 -69 -70 -71 -72 -73 -74 -75 -76 -77 -78 -79 -80 -81 -82 -83 -84 -85 -86 -87 -88 -89 -90 -91 -92 -93 -94 -95 -96 -97 -98 -99 -100 -101 -102 -103 -104 -105 -106 -107 -108 -253 -254 -255 -256 -257 -258 -259 -260 -261 -262 -263 -264 -265 -266 -267 -268 -269 -270 -271 -272 -273 -274 -275 -276 -277 -278

>C1_00290W_B	Upstream Sequence Complementary Strand
TACCTTCTCATACGGCTTCGTTCCTTGTAATCAGAACCACCATCACTTGAGTGTGCAGAA
ACACGATTCATGGAGTGACCCCTCCGGGAGTAGACCATATTCCGTAGAGTTAAATTTAAA
CTATCTATGGGAACCCTGTTCAAAACACTATGCAACTTTCTAGCGATGGAACTACGTGCA
AAACTTCGTGTCGTCAACTCTTTAAATTGTGTACCCTAGGTCTTCGCACTACAATTCAGT
ATAAGACTACTAAAGTAAGTCGCACGCTCCATACAAGCGAGCCTCACCTTCCTGGGTTGA
GAAAACTTCCTTAAGATAATATCACCCAACTTTGGACTTTATTTTCGAAGGGAACAGTGA
CTTCGACGACTACTATCTATACCAAACCTACTAGAATACAATTTCCGAGTTGTTTATCTA
CTTTAATCTATGTTCCTTCCATCTTCTTTGGTATCAGGTAGAGTGTTCCTATTCATAGTT
AAATCTTCATTGAAGTTTCCACCATTAGCAAGACCACCACTTCTTTCTCCGTAACTACGT
CTACCACTATGATATTACCGGTTGGACTACGTTAGGTTCTTTAACTCAACCTGACTTGCC
TTTAAAAATTTTGTCTTATTACGGACAACATGAACAATAGCACAACCTATATTCAGGAAA
CTAACGGGTATAGCATTCCTGTTGTTCTTTTTAGGTGGTTTTGTCTGNNNNNNNNNNNNNr/>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNNNNNNNNNNTAGCCGAAGTAACTAATATTGTTAGAATTTAGATA
CAAACCGAGCGTCAACCAACCGTTTTAGTTGAACAAGCCATGACCGTTGTAGAAAGTTAT
TTAGGACTTATTGTTGTGCTAGTAACAACGGGTATAGNNNNNNNNNNNNNNNNNNNNNNN
pan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
pan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNN</span>GAGACAAACTACTTCAAGGTAAT