C.albicans - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CST5

Promoter Sequence

Consensus
DHGGWAATMNNWYCCV: -790 -789 -788 -787 -786 -785 -784 -783 -782 -781 -780 -779 -778 -777 -776 -775 -774 -773 -772 -771 -770 -769 -768 -767 -766 -765 -764 -763 -762 -761 -760 -759 -758 -757 -756 -755 -754 -753 -752 -751 -750 -749 -748 -747 -746 -745 -744 -743 -742 -741 -740 -739 -738 -737 -736 -735 -734 -733 -732 -731 -730 -729 -728 -727 -726 -725 -724 -723 -722 -721 -720 -719 -718 -717 -716 -715 -714 -713 -712 -711 -710 -709 -708 -707 -706 -705

>CST5    upstream sequence, from -1000 to -1, size 1000
TCACGTGCCAAAAAGGATATAAGAAGGAACTTCAGAAAATTAATTTTCTGATTATACTAC
TTACTAGATTTCATAAAGTCAATATCTGATTGATACAACTTGGTTCATTATTCATAAAAC
TTAACAACTAATTCAACAAGAAAACCCAACAAAAAAATCCAAATAAAATAATCAAAAAAA
TATTATAATTAATTAATTACAAAAAAAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
pan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
pan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNTCACTGGAAGAGAAAAAGGAATCTACAATCAGGATCAATTGAAGTTAGC
ATATTCAGCAGACAACGACCCAATACAGGTTTTTAGTTCTTTCAATAAAGAATATGATCG
AGTACAACAAAAATTGTTAGACAAAATTCAATCGGAAAGAGATCATCAATTAAATTGTTT
GTCAGTCCAACATTTACACAGACAAAGAAGGTTACTCGATATATCCAGCTGTCTTGAGCA
AATTCTGCAATAATTTCGCTAATCATTGGAGGAAAGGGTAGATGACGATCCTGCATATTT
CGTCATAATTCACACATTCTTAAAATTATGCACACATCCTTGAAATGTGTTAATATTCCC
AACATTATCAATTATATGTGTTCAGAATTGGTTGCAAAGTTATCAACTCAATTCACGCTA
TATAAACCTTACAATTTCTCTACATTTTTATATTTTTTTATATTGGCTTTTCTTTTAGAA
TCAATCAATACTTTTTTTATCATTTAGATACATCTTTCATCTATTAATAGATTATCTTTC
TATATATCAAAACACGACACAGTCACGTGCCAAAAAGGATATAAGAAGGAACTTCACAAT
GCAACTGAGAGCCCCTTTTCTTATAAATCTGAAACATCGACTATAAAACCACCAAAAAAA
TCCCATCCATCGTCAATCTGTTAATATTACCCACCAGGCA

Promoter Sequence
Complementary Strand

Consensus
DHGGWAATMNNWYCCV: -687 -688 -689 -690 -691 -692 -693 -694 -695 -696 -697 -698 -699 -700 -701 -702 -703 -704 -705 -706 -707 -708 -709 -710 -711 -712 -713 -714 -715 -716 -717 -718 -719 -720 -721 -722 -723 -724 -725 -726 -727 -728 -729 -730 -731 -732 -733 -734 -735 -736 -737 -738 -739 -740 -741 -742 -743 -744 -745 -746 -747 -748 -749 -750 -751 -752 -753 -754 -755 -756 -757 -758 -759 -760 -761 -762 -763 -764 -765 -766 -767 -768 -769 -770 -771 -772 -773

>CST5	Upstream Sequence Complementary Strand
AGTGCACGGTTTTTCCTATATTCTTCCTTGAAGTCTTTTAATTAAAAGACTAATATGATG
AATGATCTAAAGTATTTCAGTTATAGACTAACTATGTTGAACCAAGTAATAAGTATTTTG
AATTGTTGATTAAGTTGTTCTTTTGGGTTGTTTTTTTAGGTTTATTTTATTAGTTTTTTT
ATAATATTAATTAATTAATGTTTTTTTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
pan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
pan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NAGTGACCTTCTCTTTTTCCTTAGATGTTAGTCCTAGTTAACTTCAATCG
TATAAGTCGTCTGTTGCTGGGTTATGTCCAAAAATCAAGAAAGTTATTTCTTATACTAGC
TCATGTTGTTTTTAACAATCTGTTTTAAGTTAGCCTTTCTCTAGTAGTTAATTTAACAAA
CAGTCAGGTTGTAAATGTGTCTGTTTCTTCCAATGAGCTATATAGGTCGACAGAACTCGT
TTAAGACGTTATTAAAGCGATTAGTAACCTCCTTTCCCATCTACTGCTAGGACGTATAAA
GCAGTATTAAGTGTGTAAGAATTTTAATACGTGTGTAGGAACTTTACACAATTATAAGGG
TTGTAATAGTTAATATACACAAGTCTTAACCAACGTTTCAATAGTTGAGTTAAGTGCGAT
ATATTTGGAATGTTAAAGAGATGTAAAAATATAAAAAAATATAACCGAAAAGAAAATCTT
AGTTAGTTATGAAAAAAATAGTAAATCTATGTAGAAAGTAGATAATTATCTAATAGAAAG
ATATATAGTTTTGTGCTGTGTCAGTGCACGGTTTTTCCTATATTCTTCCTTGAAGTGTTA
CGTTGACTCTCGGGGAAAAGAATATTTAGACTTTGTAGCTGATATTTTGGTGGTTTTTTT
AGGGTAGGTAGCAGTTAGACAATTATAATGGGTGGTCCGT