C.albicans - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

C2_01870C_A

Promoter Sequence

Consensus
HAVAVVRCGCAAHRCGCM: -89 -87 -86 -85 -84 -83 -82 -81 -80 -79 -78 -77 -76 -75 -74 -73 -72 -71 -70 -69 -68 -67 -66 -65 -64 -63 -62 -61 -60 -59 -58 -57 -56 -55 -54 -53 -52 -51 -50 -49 -48 -47 -46 -45 -44

>C2_01870C_A    upstream sequence, from -1000 to -1, size 1000
TGCTAAAGAAATTGAACCTGAACTTCCATCTTTACCTAATACTCCAAATTCAAGTTATAG
TGGATCTGGATCATTAGAGACACAAAGCCACAATGGCAACAACAACAATAGCAGCAGTAG
CAGCAGCAGCAGCAGTAACACTGTCAATGTCAACAATGACTCTAGTGGTTTTGAAAATAT
TACTAATGGAAACCCAAGAGGCTCTAGTCTTACTGCTGATTCTTCTAACAATAATAGTTT
TCCGAATAATACTAATAATAATAAACCCCAAACTGTTGATGGTGAAGAAAAAGATTCAAT
AGCAAAAACATCACTAGGAATGATTTGTCAAAGTTTACAAACGGCATTATCAAATGATGA
TAATAGTAATGTTATATCATTTTTCAAAAAAAAACAAGACCAAGAAGCAAGACAAGAACG
ATTATCAAATTTAGATGGTCAACATACAAGAATTTTAACTAGTGAAACTGGAGTATTAAG
ATTTTTCGGTGAAAGTAGTGCATTATCTTTAATTAGTGAATGTCGAGCGTTATTTTATGA
AGTTTTAGGTCCTTCTACTTTTACTAATGATCCAGCACAAAATTTCATTCACGATGAACT
GATTAGTTTTGAAAGAAATACTACTCCAGATGGTATTAATGGTGATGGTGATGGGAAACA
AATAACAACAACAAGTAATTCAGGTGTTGCGGTACAATTACCATTAAAAAAAGATGCATT
AATTATGATTGAATTATTTAAATCAAATATTAATGATACATTTTATGTTTTCAATATGAA
ATATTTCATAGAAAATATTGTTGATAAAGTTTATAATAATCCTATAATTGCCAATTCAAA
ACAATTATGTTTATTWAAWTTTTGTTTTCGCCATTGGAAGTTTATTTATTGAATATTCAT
CAGACACTAATAACANNNNNNNNNNNNNNNN>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N
</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>NNNGTAATGTTTATGATGGGAAATTATGG

Promoter Sequence
Complementary Strand

Consensus
HAVAVVRCGCAAHRCGCM: -23 -25 -26 -27 -28 -29 -30 -31 -32 -33 -34 -35 -36 -37 -38 -39 -40 -41 -42 -43 -44 -45 -46 -47 -48 -49 -50 -51 -52 -53 -54 -55 -56 -57 -58 -59 -60 -61 -62 -63 -64 -65 -66 -67

>C2_01870C_A	Upstream Sequence Complementary Strand
ACGATTTCTTTAACTTGGACTTGAAGGTAGAAATGGATTATGAGGTTTAAGTTCAATATC
ACCTAGACCTAGTAATCTCTGTGTTTCGGTGTTACCGTTGTTGTTGTTATCGTCGTCATC
GTCGTCGTCGTCGTCATTGTGACAGTTACAGTTGTTACTGAGATCACCAAAACTTTTATA
ATGATTACCTTTGGGTTCTCCGAGATCAGAATGACGACTAAGAAGATTGTTATTATCAAA
AGGCTTATTATGATTATTATTATTTGGGGTTTGACAACTACCACTTCTTTTTCTAAGTTA
TCGTTTTTGTAGTGATCCTTACTAAACAGTTTCAAATGTTTGCCGTAATAGTTTACTACT
ATTATCATTACAATATAGTAAAAAGTTTTTTTTTGTTCTGGTTCTTCGTTCTGTTCTTGC
TAATAGTTTAAATCTACCAGTTGTATGTTCTTAAAATTGATCACTTTGACCTCATAATTC
TAAAAAGCCACTTTCATCACGTAATAGAAATTAATCACTTACAGCTCGCAATAAAATACT
TCAAAATCCAGGAAGATGAAAATGATTACTAGGTCGTGTTTTAAAGTAAGTGCTACTTGA
CTAATCAAAACTTTCTTTATGATGAGGTCTACCATAATTACCACTACCACTACCCTTTGT
TTATTGTTGTTGTTCATTAAGTCCACAACGCCATGTTAATGGTAATTTTTTTCTACGTAA
TTAATACTAACTTAATAAATTTAGTTTATAATTACTATGTAAAATACAAAAGTTATACTT
TATAAAGTATCTTTTATAACAACTATTTCAAATATTATTAGGATATTAACGGTTAAGTTT
TGTTAATACAAATAAWTTWAAAACAAAAGCGGTAACCTTCAAATAAATAACTTATAAGTA
GTCTGTGATTATTGTNNNNNNNNNNNNNNNNNN>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N
</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>Nspan>NCATTACAAATACTACCCTTTAATACC