C.albicans - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

C6_01020W_A

Promoter Sequence

Consensus
HAVAVVRCGCAAHRCGCM: -161 -158 -156 -155 -154 -153 -152 -151 -150 -149 -148 -147 -146 -145 -144

>C6_01020W_A    upstream sequence, from -1000 to -1, size 1000
ATCTTAATATCCTTGTTTCTAGCATGGAAGATACTTTTCAGATATAGGAGCTTAGGCTTG
GTTTTTAAAATTTTTCACAGCAGTTTTGTATATTTTTTTCTCCACCAAAATATTCTTCCG
AATTGTTTCTTTCAAAGTTCTTGTCAAAACCATTTTAATATTTTTACGTTAACACTCAAC
AGATCTGCCAATAATGACTTTCAAAAGAATTACTCTATTGATAGAATTGTTTGAATAGAA
TGAATAGACTATGTGATGGTAGTATAAACTCCAAATCAGACATGTTTCAGAATTGTTTGA
AGTTTGTCCAACTGACCGTTATGCCAGTCATATAATACAACCAATATTTCCAGTGAAATG
CTGTATTTGATCAAACTACTCAACAAAGTCAATGATTATTGTCTTGCTTATTCATTGTTT
GGTCATGGTTGTTGCACACGATTTACAGCTTTTTGGTGATTTCAAGTTTGAATTGTCAGA
CAATTGGAGAAATGATTGTGCCAAAAAAGCATTGGAACCAATAATAAATCAATGCGCTGA
GGGTATTGAGACAATCTCCCCATTCCAACAGAAACTGATTGCAATACAATTATCAATATG
TGAATTTGAAAATGCCGAAATATCCTATCCCAGTGAATGCAGATCTCAGAATTTAGACAC
TTGTATCTTGTTATTGGAAAAGTCGCCTCAATACTGGACAACTTTCAGTGGCTACTACAG
AGAAATAAGAAATATATGCCATCAAGTAAGTTTACCATTTGCTAAAGATCAGATTTTACA
AGTGTATGGGAATATTAACTGAGTTTTACAGAACATTAATGGATGAAATGACTAATTCGA
ACAACNNNNNNNNNNNN</span>NNNNN>N>N>N>N>N>N>N>N>N>NNNTTAAGGCAAAATTTGACAAATTGATA
GGCGTTATAGATCTCATCCTAGCGGATAGAGAAAAGAATAGAGAAGATCTTAAAAGCTCG
TTCAATATGTTTAAGAACAATTTTGAAAAATCATTAAATA

Promoter Sequence
Complementary Strand

Consensus
HAVAVVRCGCAAHRCGCM: -123 -124 -125 -126 -127 -128 -129 -130 -131 -132 -133 -134 -135 -136 -137

>C6_01020W_A	Upstream Sequence Complementary Strand
TAGAATTATAGGAACAAAGATCGTACCTTCTATGAAAAGTCTATATCCTCGAATCCGAAC
CAAAAATTTTAAAAAGTGTCGTCAAAACATATAAAAAAAGAGGTGGTTTTATAAGAAGGC
TTAACAAAGAAAGTTTCAAGAACAGTTTTGGTAAAATTATAAAAATGCAATTGTGAGTTG
TCTAGACGGTTATTACTGAAAGTTTTCTTAATGAGATAACTATCTTAACAAACTTATCTT
ACTTATCTGATACACTACCATCATATTTGAGGTTTAGTCTGTACAAAGTCTTAACAAACT
TCAAACAGGTTGACTGGCAATACGGTCAGTATATTATGTTGGTTATAAAGGTCACTTTAC
GACATAAACTAGTTTGATGAGTTGTTTCAGTTACTAATAACAGAACGAATAAGTAACAAA
CCAGTACCAACAACGTGTGCTAAATGTCGAAAAACCACTAAAGTTCAAACTTAACAGTCT
GTTAACCTCTTTACTAACACGGTTTTTTCGTAACCTTGGTTATTATTTAGTTACGCGACT
CCCATAACTCTGTTAGAGGGGTAAGGTTGTCTTTGACTAACGTTATGTTAATAGTTATAC
ACTTAAACTTTTACGGCTTTATAGGATAGGGTCACTTACGTCTAGAGTCTTAAATCTGTG
AACATAGAACAATAACCTTTTCAGCGGAGTTATGACCTGTTGAAAGTCACCGATGATGTC
TCTTTATTCTTTATATACGGTAGTTCATTCAAATGGTAAACGATTTCTAGTCTAAAATGT
TCACATACCCTTATAATTGACTCAAAATGTCTTGTAATTACCTACTTTACTGATTAAGCT
TGTTGNNNNNNNNNNNNNNNNNN>N>N>N>N>N>N>N>N>N>N>N>AATTCCGTTTTAAACTGTTTAACTAT
CCGCAATATCTAGAGTAGGATCGCCTATCTCTTTTCTTATCTCTTCTAGAATTTTCGAGC
AAGTTATACAAATTCTTGTTAAAACTTTTTAGTAATTTAT