C.albicans - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

RFC52

Promoter Sequence

Consensus
HAVAVVRCGCAAHRCGCM: -107 -105 -100 -99 -98 -97 -96 -95 -94 -93 -92 -91 -90 -89 -88 -87 -86 -85 -84 -83 -82 -81 -80 -79 -78 -77 -76 -75 -74 -73 -72 -71 -70 -69 -68 -67 -66 -65 -64 -63 -62 -61 -60 -59 -58 -57 -56 -55 -54 -53 -52 -51 -50 -49 -48 -47 -46 -45 -44 -43 -42 -41 -40 -39 -38 -37 -36 -35 -34 -33 -32 -31 -30 -29 -28 -27 -26 -25 -24 -23 -22 -21 -20 -19 -18

>RFC52    upstream sequence, from -1000 to -1, size 1000
TTGATATTTCATGACCCAAGAATGATGTAGTAGTATCTCCAAATGAACATTTTGTTGGTT
TCAAATAAAAAGTATACTTTCTAAAGCGACTAAACAATTCCCTCAAAATTTCCTCATGTT
CCTCCAATGTGTTAGAATAAACAATGATGTCATCAATATAACTCTTGCAACCTTCAATAC
CATCCAATACTTCTGACATCACCTCACAAAGACTAGCTGGCGATATAGACAAACCAAACG
GAAGCACATTGAAATGATACCTTCTACCAAAAGCACTAAAACTAGTATAGTATTTAGACA
GAGCTTCCAACCTGAGTTGATGAAAGGCCGCTGTCATATCAAGTCTTGTGTAGAAACGAT
GACCGGCAATATCTCTCACTAATTCTTCTGCTCTCGGAATACTAAACTGTTTCGATATGA
TTATTAGATTCAACAAACGATAATCGACACAAAGTCTATAACTCAGATCCGATTTCCTGA
CGAATAGTACAGGAGAGTTATAACCCGGACTTTGTGGAGGAGTGGGGGAGATTAACCCTA
TCTCTAGCATCTTTTTCACCTGCTTGCGTAATTCTTCTTGTTCTGGAACCGACAATGGAT
ATTGTCTTGTAGCTGGAGGACTAATATGGGGTACCACCTCAATTTTTGGATCCCAACTTC
CACGCAGTGGTGGCTTCTGATCTAATTCACCTTTGAAAATATCTTTGTAATTCCTAATCA
ATTCAGCAAAATAACTCTTATTTGTACCTTGAACCACCGACATGATATCCTTTTTGTCAT
CAACCATACCAGCTGTATCTTCGTCATCTTCAGTCTTAAGAAGCAACATACCAACTTGAC
CTTTTCTAGCTTCATCCAAAAATTCCTCCATATCCATTAATGGAACTTCATCAAACAGAGr/>NNNNNNNNNNNpan>NNspan>NNNNN>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N
</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNN

Promoter Sequence
Complementary Strand

Consensus
HAVAVVRCGCAAHRCGCM: 0 -1 -2 -3 -4 -5 -6 -7 -8 -9 -10 -11 -12 -13 -14 -15 -16 -17 -18 -19 -20 -21 -22 -23 -24 -25 -26 -27 -28 -29 -30 -31 -32 -33 -34 -35 -36 -37 -38 -39 -40 -41 -42 -43 -44 -45 -46 -47 -48 -49 -50 -51 -52 -53 -54 -55 -56 -57 -58 -59 -60 -61 -62 -63 -64 -65 -66 -67 -68 -69 -70 -71 -72 -73 -74 -75 -76 -77 -78 -79 -80 -81 -82 -83

>RFC52	Upstream Sequence Complementary Strand
AACTATAAAGTACTGGGTTCTTACTACATCATCATAGAGGTTTACTTGTAAAACAACCAA
AGTTTATTTTTCATATGAAAGATTTCGCTGATTTGTTAAGGGAGTTTTAAAGGAGTACAA
GGAGGTTACACAATCTTATTTGTTACTACAGTAGTTATATTGAGAACGTTGGAAGTTATG
GTAGGTTATGAAGACTGTAGTGGAGTGTTTCTGATCGACCGCTATATCTGTTTGGTTTGC
CTTCGTGTAACTTTACTATGGAAGATGGTTTTCGTGATTTTGATCATATCATAAATCTGT
CTCGAAGGTTGGACTCAACTACTTTCCGGCGACAGTATAGTTCAGAACACATCTTTGCTA
CTGGCCGTTATAGAGAGTGATTAAGAAGACGAGAGCCTTATGATTTGACAAAGCTATACT
AATAATCTAAGTTGTTTGCTATTAGCTGTGTTTCAGATATTGAGTCTAGGCTAAAGGACT
GCTTATCATGTCCTCTCAATATTGGGCCTGAAACACCTCCTCACCCCCTCTAATTGGGAT
AGAGATCGTAGAAAAAGTGGACGAACGCATTAAGAAGAACAAGACCTTGGCTGTTACCTA
TAACAGAACATCGACCTCCTGATTATACCCCATGGTGGAGTTAAAAACCTAGGGTTGAAG
GTGCGTCACCACCGAAGACTAGATTAAGTGGAAACTTTTATAGAAACATTAAGGATTAGT
TAAGTCGTTTTATTGAGAATAAACATGGAACTTGGTGGCTGTACTATAGGAAAAACAGTA
GTTGGTATGGTCGACATAGAAGCAGTAGAAGTCAGAATTCTTCGTTGTATGGTTGAACTG
GAAAAGATCGAAGTAGGTTTTTAAGGAGGTATAGGTAATTACCTTGAAGTAGTTTGTCTC
NNNNNNNNNNNNNNNNN>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N
</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNN