C.albicans - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

C3_05290C_A

Promoter Sequence

Consensus
TAAATCCG: -231 -230 -229 -228 -227 -226 -225 -224 -223 -222 -221 -220 -219 -218 -217 -216 -215 -214 -213 -133 -132 -131 -130 -129 -128 -127 -126 -125 -124 -123 -122 -121 -120

>C3_05290C_A    upstream sequence, from -1000 to -1, size 1000
AGTAACAAATCAGGTTAGTATTATTATAAAATTTACTATATTTAGTATATTACCCCCCTC
CTCCTCCCCCCAAAAAAAAAGATTTCTCTAGAACAACACAACACAATACATTTGTTATTT
GCTATTAAACTTAAGGATCTACATATATGTATCAACTTATGCATCTATTCAACTCTAATA
TCTATTTGCTTGATCGAGCAATTAATTAATTCGCTCAATCTCTTTTCCCAATTAGGAAAT
TAATTTAAAGTTAGTGTGTGTAATGTGTAGTGTGTGTGTCCCATTACACAATAAATGTAA
GGGGATTACTCAATTAGGCACAAATGTCAACAATTGAAAAAATGATGCAAAAAGGATTAA
AGCAACGTGCTACCAATCAATTTAACCCACTACAAAAGCTTCAATTTGATTAATTGCCTA
ATTAGTCAAATTAAATACAGAAGGACCATAATAGTAATACAACAACAGCAGCTTTTCATT
CTTTTCCTTTGTTTACTTTGTTATCACAAGAATAATAGCAGCAGCAGCAGCAGCAGATGT
ATGATCTAATGATAGTTCTATTCTTTTTCTTCTCTCTTCTCTTACTCCTTGATATTTAAA
CATATATATATACCGGTTTATCTTGATTTGAATTTTTTTTTTTTGATTTATCTCTTCTTC
TTCTTGATATTCATTAATTCATTAATTACTTTTTTGATACCCCCCCCCCCCCTCCACTAA
GCTATTTCCATTCTTCATATATATCTATTTATATACCCTTATTCATATTTNNNNNNNNNN
pan>Npan>Npan>Npan>Npan>Npan>NNNNNNNNNGATATTTTCCTTCCAACTCAATTTCCCTTTGCATTATGTCAAACAC
TGTTGTTCTTAACTTAGATTATACTTTTNNNNNNNNNNNNNNNNNNNGTAATAATGAAAT
CATTACTTGTTATGAAACTCATAATGGTATTTGGAGACAGTACACTAGTAAATCCTTATC
CTCCTCCTTCTCATCCTCCTCATCTAATACTGGTTATAAG

Promoter Sequence
Complementary Strand

Consensus
TAAATCCG: -113 -114 -115 -116 -117 -118 -119 -120 -121 -122 -123 -124 -206 -207 -208 -209 -210 -211 -212 -213 -214 -215 -216 -217 -218 -219 -220 -221 -222

>C3_05290C_A	Upstream Sequence Complementary Strand
TCATTGTTTAGTCCAATCATAATAATATTTTAAATGATATAAATCATATAATGGGGGGAG
GAGGAGGGGGGTTTTTTTTTCTAAAGAGATCTTGTTGTGTTGTGTTATGTAAACAATAAA
CGATAATTTGAATTCCTAGATGTATATACATAGTTGAATACGTAGATAAGTTGAGATTAT
AGATAAACGAACTAGCTCGTTAATTAATTAAGCGAGTTAGAGAAAAGGGTTAATCCTTTA
ATTAAATTTCAATCACACACATTACACATCACACACACAGGGTAATGTGTTATTTACATT
CCCCTAATGAGTTAATCCGTGTTTACAGTTGTTAACTTTTTTACTACGTTTTTCCTAATT
TCGTTGCACGATGGTTAGTTAAATTGGGTGATGTTTTCGAAGTTAAACTAATTAACGGAT
TAATCAGTTTAATTTATGTCTTCCTGGTATTATCATTATGTTGTTGTCGTCGAAAAGTAA
GAAAAGGAAACAAATGAAACAATAGTGTTCTTATTATCGTCGTCGTCGTCGTCGTCTACA
TACTAGATTACTATCAAGATAAGAAAAAGAAGAGAGAAGAGAATGAGGAACTATAAATTT
GTATATATATATGGCCAAATAGAACTAAACTTAAAAAAAAAAAACTAAATAGAGAAGAAG
AAGAACTATAAGTAATTAAGTAATTAATGAAAAAACTATGGGGGGGGGGGGGAGGTGATT
CGATAAAGGTAAGAAGTATATATAGATAAATATATGGGAATAAGTATAAANNNNNNNNNN
pan>Npan>Npan>Npan>Npan>Npan>NNNNNNNNNCTATAAAAGGAAGGTTGAGTTAAAGGGAAACGTAATACAGTTTGTG
ACAACAAGAATTGAATCTAATATGAAAANNNNNNNNNNNNNNNNNNNCATTATTACTTTA
GTAATGAACAATACTTTGAGTATTACCATAAACCTCTGTCATGTGATCATTTAGGAATAG
GAGGAGGAAGAGTAGGAGGAGTAGATTATGACCAATATTC