C.albicans - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CPH1

Promoter Sequence

Consensus
TCGNYWAWWSTTGCC: -631 -630 -629 -628 -627 -626 -625 -624 -623 -622 -621 -620 -619 -618

>CPH1    upstream sequence, from -1000 to -1, size 1000
TAGTTCTTGTTGTTATTTCGGTTAAAATTATTGAAATTAATCTAGAATCATCAAATTCTA
ACAACAACTACATAATACCAGAAGAAAAACGTCAAAGAGAATTTATAGTTGTATCAATTT
AGATTTGGATTTACAATTTTATTATTCTTCAATTCTCGATTTCCTCGTGAAGTTTTTTGT
TTTAGTTGTTTTTGTTTTTGTTTTTGTTTCCCCATTGACACGAAAAAGTTTTCCTTAAAA
AAAGAGAAAAATTTCCTAGAACCAACTAAACATTCTTGCTTTACATTATCTTCATTTTAA
TTTGTTGGTGTTGTTGTAAATCANNNNNNNNNGTGGGTTGTTTTGTTTTAAACTTTTAAT
ACATCAAAANNNNNNNNNNNNNNN</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>NNGATTTTTTCTTTACAAGTTTCAT
ATATTTTTATAACTAAAGAAAGAAGGTTGGAAGATCTAACAAATTTTTTTTGTTCCCCGT
TAACCGAAACACACATACATATACTTCTGTCCACACACACACTACCACAAATTTTTGAGT
TGATTTCAAACAAGGGTTTTAGAATTTTCCGATTTGTTTTGGTCTTAGTTTTAGCTTGAC
AATCAAAAAAGAATTACAAAACATCGAACAACCTTCGACCTTCCCCCCACACTCGTTCCC
CCTCTCCTTGCCTCGAGTACACTTCACACCTCAGATCTCATTAACATAACGTCCTATATT
GCCAAGCAATTTTACTACGACAAATTCAATCATTAGGGCTATTTTGACACTTTGAATTAC
AATTTTATATCAGTGTCGCATTATTACTATTTCCATTTTCAACAAAGTATTGGATATAAC
ACGTTTCTATCAATCATTACCAACCTGACCAACAGAGTATCCATTAATTCTTAGTTAAAT
ATATTTCTTTTCACTTTTTTCACTTTTTTCATTTTTCAATTGTTGTGCCCCCCCCTCGTT
GCGGATCAAATAATATAACTGCCTAATACACTCTTTCGCC

Promoter Sequence
Complementary Strand

Consensus
TCGNYWAWWSTTGCC: -601 -603 -604 -605 -606 -607 -608 -609 -610 -611 -612 -613 -614 -615 -616

>CPH1	Upstream Sequence Complementary Strand
ATCAAGAACAACAATAAAGCCAATTTTAATAACTTTAATTAGATCTTAGTAGTTTAAGAT
TGTTGTTGATGTATTATGGTCTTCTTTTTGCAGTTTCTCTTAAATATCAACATAGTTAAA
TCTAAACCTAAATGTTAAAATAATAAGAAGTTAAGAGCTAAAGGAGCACTTCAAAAAACA
AAATCAACAAAAACAAAAACAAAAACAAAGGGGTAACTGTGCTTTTTCAAAAGGAATTTT
TTTCTCTTTTTAAAGGATCTTGGTTGATTTGTAAGAACGAAATGTAATAGAAGTAAAATT
AAACAACCACAACAACATTTAGTNNNNNNNNNCACCCAACAAAACAAAATTTGAAAATTA
TGTAGTTTTNNNNNNNNNNNNNNN</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>N</span>Nspan>NCTAAAAAAGAAATGTTCAAAGTA
TATAAAAATATTGATTTCTTTCTTCCAACCTTCTAGATTGTTTAAAAAAAACAAGGGGCA
ATTGGCTTTGTGTGTATGTATATGAAGACAGGTGTGTGTGTGATGGTGTTTAAAAACTCA
ACTAAAGTTTGTTCCCAAAATCTTAAAAGGCTAAACAAAACCAGAATCAAAATCGAACTG
TTAGTTTTTTCTTAATGTTTTGTAGCTTGTTGGAAGCTGGAAGGGGGGTGTGAGCAAGGG
GGAGAGGAACGGAGCTCATGTGAAGTGTGGAGTCTAGAGTAATTGTATTGCAGGATATAA
CGGTTCGTTAAAATGATGCTGTTTAAGTTAGTAATCCCGATAAAACTGTGAAACTTAATG
TTAAAATATAGTCACAGCGTAATAATGATAAAGGTAAAAGTTGTTTCATAACCTATATTG
TGCAAAGATAGTTAGTAATGGTTGGACTGGTTGTCTCATAGGTAATTAAGAATCAATTTA
TATAAAGAAAAGTGAAAAAAGTGAAAAAAGTAAAAAGTTAACAACACGGGGGGGGAGCAA
CGCCTAGTTTATTATATTGACGGATTATGTGAGAAAGCGG