C.albicans - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

C6_01020W_B

Promoter Sequence

Consensus
YTKCYYWWTTNRG: -155 -154 -153 -152 -151 -150 -149 -148 -147 -146 -145 -144 -143 -142 -141 -140 -139 -138 -133

>C6_01020W_B    upstream sequence, from -1000 to -1, size 1000
GATCTTAATATCCTTGTTTCTAGCATGGAAGATACTTTTCAGATATAGGAGCTTAGGCTT
GGTTTTTAAAATTTTTCACAGCAGTTTTGTATATTTTTTTCTCCACCAAAATATTCTTCC
GAATTGTTTCTTTCAAAGTTCTTGTCAAAACCATTTTAATATTTTTACGTTAACACTCAA
CAGATCTGCCAATAATGACTTTCAAAAGAATTACTCTATTGATAGAATTGTTTGAATAGA
ATGAATAGACTATGTGATGGTAGTATAAACTCCAAATCAGACATGTTTCAGAATTGTTTG
AAGTTTGTCCAACTGACCGTTATGCCAGTCATATAATACAACCAATATTTCCAGTGAAAT
GCTGTATTTGATCAAACTACTCAACAAAGTCAATGATTATTGTCTTGCTTATTCATTGTT
TGGTCATGGTTGTTGCACACGATTTACAGCTTTTTGGTGATTTCAAGTTTGAATTGTCAG
ACAATTGGAGAAATGATTGTGCCAAAAAAGCGTTGGAACCAATAATAAATCAATGCGCTG
AGGGTATTGAGACAATCTCCCCATTCCAACAGAAACTGATTGCAATACAATTATCAATAT
GTGAATTTGAAAATGCAGAAATATCTTATCCCAGTGAATGCAGATCTCAGAATTTGGACA
CTTGTATCTTGTTATTGGAAAAGTCGCCTCAATACTGGACAACTTTCAGTGGCTACTACA
GAGAAATAAGAAATATATGCCATCAAGTAAGTTTACCATTTGCTAAAGATCAGATTTTAC
AAGTGTATGGGAATATTAACTGAGTTTTACAGAACATTAATGGATGAAATGACTAATTCG
AACAACNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNTTAAGGCAAATTTGATAAATTGATA
GGCGTTATAGATCTCATCCTAGCGGACAGAGAAAAGAATAGAGAAGATCTCAAAAGCTCA
TTCAATATGTTTAAGAACAATTTTGAAAAATCATTGAATA

Promoter Sequence
Complementary Strand

Consensus
YTKCYYWWTTNRG: -125 -126 -127 -128 -129 -130 -131 -132 -133 -134 -135 -136 -137 -138 -139 -140 -141 -142

>C6_01020W_B	Upstream Sequence Complementary Strand
CTAGAATTATAGGAACAAAGATCGTACCTTCTATGAAAAGTCTATATCCTCGAATCCGAA
CCAAAAATTTTAAAAAGTGTCGTCAAAACATATAAAAAAAGAGGTGGTTTTATAAGAAGG
CTTAACAAAGAAAGTTTCAAGAACAGTTTTGGTAAAATTATAAAAATGCAATTGTGAGTT
GTCTAGACGGTTATTACTGAAAGTTTTCTTAATGAGATAACTATCTTAACAAACTTATCT
TACTTATCTGATACACTACCATCATATTTGAGGTTTAGTCTGTACAAAGTCTTAACAAAC
TTCAAACAGGTTGACTGGCAATACGGTCAGTATATTATGTTGGTTATAAAGGTCACTTTA
CGACATAAACTAGTTTGATGAGTTGTTTCAGTTACTAATAACAGAACGAATAAGTAACAA
ACCAGTACCAACAACGTGTGCTAAATGTCGAAAAACCACTAAAGTTCAAACTTAACAGTC
TGTTAACCTCTTTACTAACACGGTTTTTTCGCAACCTTGGTTATTATTTAGTTACGCGAC
TCCCATAACTCTGTTAGAGGGGTAAGGTTGTCTTTGACTAACGTTATGTTAATAGTTATA
CACTTAAACTTTTACGTCTTTATAGAATAGGGTCACTTACGTCTAGAGTCTTAAACCTGT
GAACATAGAACAATAACCTTTTCAGCGGAGTTATGACCTGTTGAAAGTCACCGATGATGT
CTCTTTATTCTTTATATACGGTAGTTCATTCAAATGGTAAACGATTTCTAGTCTAAAATG
TTCACATACCCTTATAATTGACTCAAAATGTCTTGTAATTACCTACTTTACTGATTAAGC
TTGTTGNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNAATTCCGTTTAAACTATTTAACTAT
CCGCAATATCTAGAGTAGGATCGCCTGTCTCTTTTCTTATCTCTTCTAGAGTTTTCGAGT
AAGTTATACAAATTCTTGTTAAAACTTTTTAGTAACTTAT