C.tropicalis - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CTRG_00054

Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -574 -573 -572 -571 -570 -569 -568 -567 -566 -565 -564 -563 -562 -561 -560 -559 -558 -557 -556 -555 -554 -553 -552 -551 -550 -549 -548 -547 -546 -545 -544 -543 -542 -541 -540 -539 -538 -537 -536 -535 -534 -533 -532 -531 -530 -529 -528 -527 -526 -525 -524 -523 -522 -521 -520 -519 -518 -517 -516 -515 -514 -513 -512 -511 -510 -509 -508 -507 -506 -505 -504 -503 -502 -501 -500 -499 -498 -497 -496 -495 -494 -493 -492 -491 -490 -489 -488 -487 -486 -485 -484 -483 -482 -481 -480 -479 -478 -477 -476 -475 -474 -473 -472 -471 -470 -469 -468 -467 -466 -465 -464 -463 -462 -461 -460 -459 -458 -457 -456 -455 -454 -453 -452 -451 -450 -449 -448 -447 -446 -445 -444 -443 -442 -441 -440 -439 -438 -437 -436 -435 -434 -433 -432 -431 -430 -429 -428 -427 -426 -425 -424 -423 -422 -421 -420 -419 -418 -417 -416 -415 -414 -413 -412 -411 -410 -409 -408 -407 -406 -405 -404 -403 -402 -401 -400 -399 -398 -397 -396 -395 -394 -393 -392 -391 -390 -389 -388 -387 -386 -385 -384 -383 -382 -381 -380 -379 -378 -377 -376 -375 -374 -373 -372 -371 -370 -369 -368 -367 -366 -365 -364 -363 -362 -361 -360 -359 -358 -357

>CTRG_00054    upstream sequence, from -1000 to -1, size 1000
CTACTTTGGTTAATGAATTGGCTTCCACTCATACTAAGTTTAACCAATCAACTTCAGAAT
TCAATTTCTATCAAGATGCAAATCCATCGGAAGTCAAACGGGCTGTATCCATTATGACTG
TTGTGTACAACTTGTCCAAGAAGTTGTTAGACCAGTGGCCAGAACATGCAACATTGAAGA
ATATTGTATTTGCATCTAATGAGTTCCTTTCTTATCCAATTGGATTGCCTTTGGGAAGAT
ATTTGCAGAAATTAGAACAGATATATACATTCATTGCTGAATGGCAAAAGTATGCTTCTA
GCCAAGTCTCATTGAAAGATCAATTTGATATATTGACTAACTTGATAAATTCTTGGAGAA
AGTTAGAATTGTCTACTTGGAAGTCGTTATTGAAATTTGAAGAATTGTCAATGAAAAGAA
TATGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>NNNNNAATTGGAGAAAGAATGTCTTTGAAGGTAATATTGTTGGCCCAGTAGAC
AAGACCGTTTAATATGTAGGCTTGAAACAAAGTGCAGAAAGGATCTCACCAACAGTTTGT
ACAAAATTGTTTGAAAAGTATCGTTCTTTGTTGAGTACTCAAGTTCAACCCAATTATTGA
ACAAGGAATCACTGAAGCCACTAGTAGTGTAAAGGGATTCAAAGAATTACCATCTATTCA
AAATGTTGTTTCCAGTAACGAAGCCAGTCTTGTTCAGACTATTTCAAGTTGGAATGAAAG
ACCAAAGAGACTTCAAGATTTGACTTTAATTGAAAAGAAC

Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -326 -327 -328 -329 -330 -331 -332 -333 -334 -335 -336 -337 -338 -339 -340 -341 -342 -343 -344 -345 -346 -347 -348 -349 -350 -351 -352 -353 -354 -355 -356 -357 -358 -359 -360 -361 -362 -363 -364 -365 -366 -367 -368 -369 -370 -371 -372 -373 -374 -375 -376 -377 -378 -379 -380 -381 -382 -383 -384 -385 -386 -387 -388 -389 -390 -391 -392 -393 -394 -395 -396 -397 -398 -399 -400 -401 -402 -403 -404 -405 -406 -407 -408 -409 -410 -411 -412 -413 -414 -415 -416 -417 -418 -419 -420 -421 -422 -423 -424 -425 -426 -427 -428 -429 -430 -431 -432 -433 -434 -435 -436 -437 -438 -439 -440 -441 -442 -443 -444 -445 -446 -447 -448 -449 -450 -451 -452 -453 -454 -455 -456 -457 -458 -459 -460 -461 -462 -463 -464 -465 -466 -467 -468 -469 -470 -471 -472 -473 -474 -475 -476 -477 -478 -479 -480 -481 -482 -483 -484 -485 -486 -487 -488 -489 -490 -491 -492 -493 -494 -495 -496 -497 -498 -499 -500 -501 -502 -503 -504 -505 -506 -507 -508 -509 -510 -511 -512 -513 -514 -515 -516 -517 -518 -519 -520 -521 -522 -523 -524 -525 -526 -527 -528 -529 -530 -531 -532 -533 -534 -535 -536 -537 -538 -539 -540 -541 -542 -543 -544 -545 -546

>CTRG_00054	Upstream Sequence Complementary Strand
GATGAAACCAATTACTTAACCGAAGGTGAGTATGATTCAAATTGGTTAGTTGAAGTCTTA
AGTTAAAGATAGTTCTACGTTTAGGTAGCCTTCAGTTTGCCCGACATAGGTAATACTGAC
AACACATGTTGAACAGGTTCTTCAACAATCTGGTCACCGGTCTTGTACGTTGTAACTTCT
TATAACATAAACGTAGATTACTCAAGGAAAGAATAGGTTAACCTAACGGAAACCCTTCTA
TAAACGTCTTTAATCTTGTCTATATATGTAAGTAACGACTTACCGTTTTCATACGAAGAT
CGGTTCAGAGTAACTTTCTAGTTAAACTATATAACTGATTGAACTATTTAAGAACCTCTT
TCAATCTTAACAGATGAACCTTCAGCAATAACTTTAAACTTCTTAACAGTTACTTTTCTT
ATACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>NNNTTAACCTCTTTCTTACAGAAACTTCCATTATAACAACCGGGTCATCTG
TTCTGGCAAATTATACATCCGAACTTTGTTTCACGTCTTTCCTAGAGTGGTTGTCAAACA
TGTTTTAACAAACTTTTCATAGCAAGAAACAACTCATGAGTTCAAGTTGGGTTAATAACT
TGTTCCTTAGTGACTTCGGTGATCATCACATTTCCCTAAGTTTCTTAATGGTAGATAAGT
TTTACAACAAAGGTCATTGCTTCGGTCAGAACAAGTCTGATAAAGTTCAACCTTACTTTC
TGGTTTCTCTGAAGTTCTAAACTGAAATTAACTTTTCTTG