PathoYeastract
C.tropicalis
YEASTRACT+ INESC-ID IST IBB
Home > Search by DNA motif > Result > View in Promoter Contact/Credits     Tutorial     Help

 

Back to top top

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!
Standard Name CTRG_00329
Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -414 -413 -412 -411 -410 -409 -408 -407 -406 -405 -404 -403 -402 -401 -400 -399 -398 -397 -396 -395 -394 -393 -392 -391 -390 -389 -388 -387 -386 -385 -384 -383 -382 -381 -380 -379 -378 -377 -376 -375 -374 -373 -372 -371 -370 -369 -368 -367 -366 -365 -364 -363 -362 -361 -360 -359 -358 -357 -356 -355 -354 -353 -352 -351 -350 -349 -348 -347 -346 -345 -344 -343 -342 -341 -340 -339 -338 -337 -336 -335 -334 -333 -332 -331 -330 -329 -328 -327 -326 -325 -324 -323 -322 -321 -320 -319 -318 -317 -316 -315 -314 -313 -312 -311 -310 -309 -308 -307 -306 -305 -304 -303 -302 -301 -300 -299 -298 -297 -296 -295 -294 -293 -292 -291 -290 -289 -288 -287 -286 -285 -284 -283 -282 -281 -280 -279 -278 -277 -276 -275 -272 
>CTRG_00329    upstream sequence, from -1000 to -1, size 1000
GTTAATTTCCTTATCTGATATACTCAAATTATGTCTGTTTCTAGTAACGGTAGACGTTTC
AGTGAACATCATTTACACCCAAGTATTATTCAAGATGTATCCACAGATACCCCAGGTATT
GTGGCTGCAGAATTAGCAGCAGAATTGGGAGTCGAAGAAGAAGGATTATTGAATACTGAT
GCTACGAAAAGACACAGTTATGGTGCTATACTTGCTGATATACCAGATCAAGATTACGAT
ATTGATGATCCTAATAGTGGCTATGCATTGCCTAAAGCTCAATTATACACAGTTATCTCA
AGTTTTATTTTTGGGTTCATTCTTGGCAGCATTGGATGGTACAGTGGTTACAACTTTATT
AACCATGATAGCTTTCAGATTTTGTATGCTGTGTCAAACATCTCCCTGGATTTGCAACTG
CATATTTATTTATCTTCAGCAGCTTTTCCAACCTATTTTTTGGGTAAGTTGGTCTGATAT
CTTTGGTATAAGAAATTTTGTTGCTTTGGATTGCAGTGCTGTTTTTATGGAATTGGGTTG
GTGCCATTTGGTGGGGGGTTGCCTAACTCATCTTCCTCGTTATGGGTTTTTNNNNNNNNNr/>NNNNNNNNNNNNNNN>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Nn>NNNATTGGCAAATATTTGTTTTGGATTAG
TGCTGCCTCTGGTAGTGTTCTTAGTGATCTTGTTGCCGATTAGTTGAGTTGAAAGTATGT
TTTTATTTTACAAGTCCCATTAGCATTGGTTGTATTTTTATCAACTTATGTGTTCTTGCA
TTTACCAGCTGGATCACCTGGGTTGGGGGTTAAAGGACGTATTAGTGAGAAATTGAAACT
TGTTGATTTCTTGGGTGCTTCTTTATTAGTCAGTTCTCTT
Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -245 -246 -247 -248 -249 -250 -251 -252 -253 -254 -255 -256 -257 -258 -259 -260 -261 -262 -263 -264 -265 -266 -267 -268 -269 -270 -271 -272 -273 -274 -275 -276 -277 -278 -279 -280 -281 -282 -283 -284 -285 -286 -287 -288 -289 -290 -291 -292 -293 -294 -295 -296 -297 -298 -299 -300 -301 -302 -303 -304 -305 -306 -307 -308 -309 -310 -311 -312 -313 -314 -315 -316 -317 -318 -319 -320 -321 -322 -323 -324 -325 -326 -327 -328 -329 -330 -331 -332 -333 -334 -335 -336 -337 -338 -339 -340 -341 -342 -343 -344 -345 -346 -347 -348 -349 -350 -351 -352 -353 -354 -355 -356 -357 -358 -359 -360 -361 -362 -363 -364 -365 -366 -367 -368 -369 -370 -371 -372 -373 -374 -375 -376 -377 -378 -379 -380 
>CTRG_00329	Upstream Sequence Complementary Strand
CAATTAAAGGAATAGACTATATGAGTTTAATACAGACAAAGATCATTGCCATCTGCAAAG
TCACTTGTAGTAAATGTGGGTTCATAATAAGTTCTACATAGGTGTCTATGGGGTCCATAA
CACCGACGTCTTAATCGTCGTCTTAACCCTCAGCTTCTTCTTCCTAATAACTTATGACTA
CGATGCTTTTCTGTGTCAATACCACGATATGAACGACTATATGGTCTAGTTCTAATGCTA
TAACTACTAGGATTATCACCGATACGTAACGGATTTCGAGTTAATATGTGTCAATAGAGT
TCAAAATAAAAACCCAAGTAAGAACCGTCGTAACCTACCATGTCACCAATGTTGAAATAA
TTGGTACTATCGAAAGTCTAAAACATACGACACAGTTTGTAGAGGGACCTAAACGTTGAC
GTATAAATAAATAGAAGTCGTCGAAAAGGTTGGATAAAAAACCCATTCAACCAGACTATA
GAAACCATATTCTTTAAAACAACGAAACCTAACGTCACGACAAAAATACCTTAACCCAAC
CACGGTAAACCACCCCCCAACGGATTGAGTAGAAGGAGCAATACCCAAAAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNN>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>NNNTAACCGTTTATAAACAAAACCTAATC
ACGACGGAGACCATCACAAGAATCACTAGAACAACGGCTAATCAACTCAACTTTCATACA
AAAATAAAATGTTCAGGGTAATCGTAACCAACATAAAAATAGTTGAATACACAAGAACGT
AAATGGTCGACCTAGTGGACCCAACCCCCAATTTCCTGCATAATCACTCTTTAACTTTGA
ACAACTAAAGAACCCACGAAGAAATAATCAGTCAAGAGAA
w3c xhtml validator w3c css validator