C.tropicalis - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CTRG_00430

Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -394 -393 -392 -391 -390 -389 -388 -387 -386 -385 -384 -383 -382 -381 -380 -379 -378 -377 -376 -375 -374 -373 -372 -371 -370 -369 -368 -367 -366 -365 -364 -363 -362 -361 -360 -359 -358 -357 -356 -355 -354 -353 -352 -351 -350 -349 -348 -347 -346 -345 -344 -343 -342 -341 -340 -339 -338 -337 -336 -335 -334 -333 -332 -331 -330 -329 -328 -327 -326 -325 -324 -323

>CTRG_00430    upstream sequence, from -1000 to -1, size 1000
TAATTTACCACACAATGAACTGTATGGAAATCTACAGCCCCACTTGGCAAAGTCAACCAC
TCAATTGACATTGGAATCTAATAGAACAAGCACCAGTGGGTTGTCTTTCATATCAAAACG
CGAACGTTCAGATTGGAAAAGATATGGTTCCCATAATAGGTTGTACCAGTCGTTGATCGA
CATCAAAAATAAAATCTTTCATATAAAACATTTACCTGCAACAGAAGAAGGTAGAATCAT
TCCACTAACAGTGTCACCCCAGTCTGTGAATTCATACTATCAAGACGAGTTCTATGAACC
GAAATCACATAGTTTTGTTGATGAAAGAACTAATCAGCCATATATCAGCAATATCATCAC
CTCATCAAAGTACACTGTGTACACATTCTTGCCAAAACAATTGAAGGCGCAATTCTCGAA
AGTTGCCAATTGTTACTTTATGGTTGTGGCTATTATGCAAATGATCCCTGGGTGGTCAAC
TACAGGTCATTTTACCACTATCATTCCATTATGTATTTTCATGTCTATCTCAATTGCTCG
TGAAGGGTTTCATGATTGGAAAAGCCACGGGCACGATAATTGAAAAGGAAATAATAAAAG
AACAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNCTGAAACTATACCC
GGTCATTACCACTAGTGCAAATCATAGTAATGTTTTGTCCGTCCATAATGCTTCCTCTGT
ATCGTCATTATCTGACTTGGAAGAATCTGTCCAGAAAACGAGTTGAGTTACACCAATAGG
GCAGGAATGAGACATTACACTATTACAGCCAATCCAGCAAGGGCACACAAATGTCAAAGT
TGGAGATATAATCAAGATTAACGAAAATGAATGGTTCCCATCAGATGTGGTGTTGATTGC
CACCAGTGAAACAGAAACCAACGAGGCATTTGTTGAAACC

Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -289 -294 -295 -296 -297 -298 -299 -300 -301 -302 -303 -304 -305 -306 -307 -308 -309 -310 -311 -312 -313 -314 -315 -316 -317 -318 -319 -320 -321 -322 -323 -324 -325 -326 -327 -328 -329 -330 -331 -332 -333 -334 -335 -336 -337 -338 -339 -340 -341 -342 -343 -344 -345 -346 -347 -348 -349 -350 -351 -352 -353 -354 -355 -356 -357 -358 -359 -360 -361 -362 -363 -364 -365

>CTRG_00430	Upstream Sequence Complementary Strand
ATTAAATGGTGTGTTACTTGACATACCTTTAGATGTCGGGGTGAACCGTTTCAGTTGGTG
AGTTAACTGTAACCTTAGATTATCTTGTTCGTGGTCACCCAACAGAAAGTATAGTTTTGC
GCTTGCAAGTCTAACCTTTTCTATACCAAGGGTATTATCCAACATGGTCAGCAACTAGCT
GTAGTTTTTATTTTAGAAAGTATATTTTGTAAATGGACGTTGTCTTCTTCCATCTTAGTA
AGGTGATTGTCACAGTGGGGTCAGACACTTAAGTATGATAGTTCTGCTCAAGATACTTGG
CTTTAGTGTATCAAAACAACTACTTTCTTGATTAGTCGGTATATAGTCGTTATAGTAGTG
GAGTAGTTTCATGTGACACATGTGTAAGAACGGTTTTGTTAACTTCCGCGTTAAGAGCTT
TCAACGGTTAACAATGAAATACCAACACCGATAATACGTTTACTAGGGACCCACCAGTTG
ATGTCCAGTAAAATGGTGATAGTAAGGTAATACATAAAAGTACAGATAGAGTTAACGAGC
ACTTCCCAAAGTACTAACCTTTTCGGTGCCCGTGCTATTAACTTTTCCTTTATTATTTTC
TTGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNGACTTTGATATGGG
CCAGTAATGGTGATCACGTTTAGTATCATTACAAAACAGGCAGGTATTACGAAGGAGACA
TAGCAGTAATAGACTGAACCTTCTTAGACAGGTCTTTTGCTCAACTCAATGTGGTTATCC
CGTCCTTACTCTGTAATGTGATAATGTCGGTTAGGTCGTTCCCGTGTGTTTACAGTTTCA
ACCTCTATATTAGTTCTAATTGCTTTTACTTACCAAGGGTAGTCTACACCACAACTAACG
GTGGTCACTTTGTCTTTGGTTGCTCCGTAAACAACTTTGG