C.tropicalis - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CTRG_00936

Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -727 -724 -723 -722 -721 -720 -719 -718 -717 -716 -715 -714 -713 -712 -711 -710 -709 -708 -707 -706 -705 -704 -703 -702 -701 -700 -699 -698 -697 -696 -695 -694 -693 -692 -691 -690 -689 -688 -687 -686 -685 -684 -683 -682 -681 -680 -679 -678 -677 -676 -675 -674 -673 -672 -671 -670 -669 -668 -667 -666 -665 -664 -663 -662 -661 -660 -659 -658 -657 -656 -655 -654 -653 -652

>CTRG_00936    upstream sequence, from -1000 to -1, size 1000
AATTTATTTATCCTATTTATGTTTCCACTTGTGTTGTTTATATTGTATATATTTAGATGG
TTGAAATTTTATTTTTTATTAAATATACTTACTTAGTTTATATTGTTTTAGAAGAAACGT
GATCTCTCTACTATATGAGATGCTGTATAAAGAAATGAGAAGCTTTAAACAAAGTTGGTT
GCAAAAAGAGAAACAACCCCTTTCTCAAGAAAACATTAACAAAAATAAATTGTAAATTAT
ATATATGTTATAACTATAAAAAGGAGATTAAATTTCNNNNNNNNNNNNNNNNNNNNNNNN
NNNNN>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>NNNNTGGATTTTTTTTTTTTCTTCATTTCTTTGGTGCCAGAATTTTTT
TTTTCTTTTGCTGTCGTTTGTTTGTTGGAAATTATAATTTAATCAATTGAATTTCAAATA
TTGGATATCGTTTTTCTGGTATAATATACTGCCAGGGTTATTTCTATGGTATTTAGTTGA
CATATAAGTTACAATATTCCTTTTGGAAAAGCACTCACAGCCGTGTTGCAATGATTTGCT
CAATAATTGGTAATTCCAAATGTTTCATCAATTAGTTGTACTCACATATGCTTCTTTATG
CTATTTAATCAATCATTTTCCATACGTCATTTCCTCACATGCTCACATGTTTTCATTTCA
ACTCGTATTTAATTTGGGCTTACCATGTTGCAAATCAACTCTAATTGATTGATTCGCCTT
TGATACACGACCGACACTCGCGAATTTTTATTTTTTTTTGTCTCCTTCTTTTAAACAGTG
AAAGGAAAAGAAAAAAAAGAAAAAGGTAGTGCATGGCTGACAAGAAGATTTGAAGAGAAA
TGTTTATTTTTGTTTTTTGTTGTTGTCGCTGTTGATCTTTGTCATTTTGGTTGGTATTCA
AGAACACTAGACAAACATTCATATTCTATAATTGACAACG

Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -624 -625 -626 -627 -628 -629 -630 -631 -632 -633 -634 -635 -636 -637 -638 -639 -640 -641 -642 -643 -644 -645 -646 -647 -648 -649 -650 -651 -652 -653 -654 -655 -656 -657 -658 -659 -660 -661 -662 -663 -664 -665 -666 -667 -668 -669 -670 -671 -672 -673 -674 -675 -676 -677 -678 -679 -680 -681 -682 -683 -684 -685 -686 -687 -688 -689 -690 -691 -692 -693 -694 -695

>CTRG_00936	Upstream Sequence Complementary Strand
TTAAATAAATAGGATAAATACAAAGGTGAACACAACAAATATAACATATATAAATCTACC
AACTTTAAAATAAAAAATAATTTATATGAATGAATCAAATATAACAAAATCTTCTTTGCA
CTAGAGAGATGATATACTCTACGACATATTTCTTTACTCTTCGAAATTTGTTTCAACCAA
CGTTTTTCTCTTTGTTGGGGAAAGAGTTCTTTTGTAATTGTTTTTATTTAACATTTAATA
TATATACAATATTGATATTTTTCCTCTAATTTAAAGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNN>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>NNNNNACCTAAAAAAAAAAAAGAAGTAAAGAAACCACGGTCTTAAAAAA
AAAAGAAAACGACAGCAAACAAACAACCTTTAATATTAAATTAGTTAACTTAAAGTTTAT
AACCTATAGCAAAAAGACCATATTATATGACGGTCCCAATAAAGATACCATAAATCAACT
GTATATTCAATGTTATAAGGAAAACCTTTTCGTGAGTGTCGGCACAACGTTACTAAACGA
GTTATTAACCATTAAGGTTTACAAAGTAGTTAATCAACATGAGTGTATACGAAGAAATAC
GATAAATTAGTTAGTAAAAGGTATGCAGTAAAGGAGTGTACGAGTGTACAAAAGTAAAGT
TGAGCATAAATTAAACCCGAATGGTACAACGTTTAGTTGAGATTAACTAACTAAGCGGAA
ACTATGTGCTGGCTGTGAGCGCTTAAAAATAAAAAAAAACAGAGGAAGAAAATTTGTCAC
TTTCCTTTTCTTTTTTTTCTTTTTCCATCACGTACCGACTGTTCTTCTAAACTTCTCTTT
ACAAATAAAAACAAAAAACAACAACAGCGACAACTAGAAACAGTAAAACCAACCATAAGT
TCTTGTGATCTGTTTGTAAGTATAAGATATTAACTGTTGC