C.tropicalis - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CTRG_01470

Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -1000 -999 -998 -997 -996 -995 -994 -993 -992 -991 -990 -989 -988 -987 -986 -985 -984 -983 -982

>CTRG_01470    upstream sequence, from -1000 to -1, size 1000
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NTTTATGAATCTCTTAC
TATCGATTATTTCTTCATATGTTGAACTCTGGCTTTATTTCCTGATAATGATATTCCACC
AAGACAATTTCCATGATATGACATACCTCTAGAAATAAATTGATTCTTTGTTGGTTTTTT
CATTTCAATCCAATATTGAATTGCCAACTTAATTGCATTTTCATTAGCTTCACTACCCAG
GTTTGCAAAATAAACTTTTGCTATTTTATCATCATATCCATCAAGAAGTAAATTTGCAAA
ATTTTCTACTATAGGAATTGTAAAATCCGCATTAAATGAATAAGTTATATTATTTAACAT
ATGAGAATGAATGGATTCTATAACTTCTGGATTATTATGACCAACTGATATAACAGCTGC
TCCTCCTATTGCATCAAGATATTTTTTACCATCTTGTGAATAAACATATTGACCTTTTGC
TTTGATTAGAACCGTTGGTGGTTTTGTTATAGATCTATGAATAAGTTTAGAGTTTTGTAA
TTCGGAATCAGTAAATTGAGTCATAAAGAGCAAATAGTAAGTAAGGAAACATTTTGCACG
TTGCAATTGATGGGAACAAGTGTATGGCTTTAAATATTTCGTTAATTGTGTATGTGTGAT
AACCCCCCCCCGGATTTGGATTGCCGCAAAAATGAATAAGGGGGGGTTACATAAAGAGAT
AACAAAATTTCAATGGGTCTTCCAGAAGTGGTAAATACTTCCGACAGAGTTAAACCCACA
TGGATGTTGAAATTCAATTAACAACGGTGTAAGAACCGATTCTCATGATATTTTCAATTC
TATAAAGTTAATCACTCTACTAGTAAATTATACAGTTATCAATACTTCAAATCAAAACTC
TCGTATAGAAACCAATTTCCGCGCAATTATAAAAAGAAAGAAAATTCCGCCTTGATTTAT
TGCACTTTCCTTATCAGTATCAACATCACCAACTCTAGCA

Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -956 -957 -958 -959 -960 -961 -962 -963 -964 -965 -966 -967 -968 -969 -970 -971

>CTRG_01470	Upstream Sequence Complementary Strand
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NNNNAAATACTTAGAGAATG
ATAGCTAATAAAGAAGTATACAACTTGAGACCGAAATAAAGGACTATTACTATAAGGTGG
TTCTGTTAAAGGTACTATACTGTATGGAGATCTTTATTTAACTAAGAAACAACCAAAAAA
GTAAAGTTAGGTTATAACTTAACGGTTGAATTAACGTAAAAGTAATCGAAGTGATGGGTC
CAAACGTTTTATTTGAAAACGATAAAATAGTAGTATAGGTAGTTCTTCATTTAAACGTTT
TAAAAGATGATATCCTTAACATTTTAGGCGTAATTTACTTATTCAATATAATAAATTGTA
TACTCTTACTTACCTAAGATATTGAAGACCTAATAATACTGGTTGACTATATTGTCGACG
AGGAGGATAACGTAGTTCTATAAAAAATGGTAGAACACTTATTTGTATAACTGGAAAACG
AAACTAATCTTGGCAACCACCAAAACAATATCTAGATACTTATTCAAATCTCAAAACATT
AAGCCTTAGTCATTTAACTCAGTATTTCTCGTTTATCATTCATTCCTTTGTAAAACGTGC
AACGTTAACTACCCTTGTTCACATACCGAAATTTATAAAGCAATTAACACATACACACTA
TTGGGGGGGGGCCTAAACCTAACGGCGTTTTTACTTATTCCCCCCCAATGTATTTCTCTA
TTGTTTTAAAGTTACCCAGAAGGTCTTCACCATTTATGAAGGCTGTCTCAATTTGGGTGT
ACCTACAACTTTAAGTTAATTGTTGCCACATTCTTGGCTAAGAGTACTATAAAAGTTAAG
ATATTTCAATTAGTGAGATGATCATTTAATATGTCAATAGTTATGAAGTTTAGTTTTGAG
AGCATATCTTTGGTTAAAGGCGCGTTAATATTTTTCTTTCTTTTAAGGCGGAACTAAATA
ACGTGAAAGGAATAGTCATAGTTGTAGTGGTTGAGATCGT