C.tropicalis - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CTRG_01472

Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -1000 -999 -998 -997 -996 -995 -994 -993 -992 -991 -990 -989 -988 -987 -986 -985 -984 -983 -982 -981 -980 -979 -978 -977 -976 -975 -974 -973 -972 -971 -970 -969 -968 -967 -966 -965 -964 -963 -962 -961 -960 -959 -958 -957 -956 -955 -954 -953 -952 -951 -950 -949 -948 -947 -946 -945 -944 -943 -942 -941 -940 -939 -938 -937 -936 -935 -934 -933 -932 -931 -930 -929 -928 -927 -926 -925 -924 -923 -922 -921 -920 -919 -918 -917 -916 -915 -914 -913 -912 -911 -910 -909 -908 -907 -906 -905 -904 -903 -902 -901 -900 -899 -898 -897 -896 -895 -894 -893 -892 -891 -890 -889 -888 -887 -886 -885 -884 -883 -882 -881 -880 -879 -878 -877 -876 -875 -874 -873 -872 -871 -870 -869 -868 -867 -866 -865 -864 -863 -862 -861 -860 -859 -858 -857 -856 -855 -854 -853 -852 -851 -850 -849 -848 -847 -846 -845 -844 -843 -842 -841 -840 -839 -838 -837

>CTRG_01472    upstream sequence, from -1000 to -1, size 1000
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>NNNNNCCCACCTCCGTTGTCTTGCGTTATGGTTAGTAAAAAACTTATTTTGTG
GGTTATCTAATGGCTCAAGCATGTTTAATTGTGGTCTTTCATATCAAAGTTTTGCCCTTT
CATGTGCAGCTGGTTATGCTGTTCAACAAATTATTAAGAGGGATAATCTTTTGGATAATG
TCAAGAAAATGGGAGAATATTTAGGTGAACAATTGCTTGCAAAAGTAGGTGTGATTCCAA
TAGTTGTAGATATTCGAGGAAGAGGGTTGTTCTGGGGTATTGAATTTGGTAGACAGCAAG
AGAATAACAAACCATTTGATCCCGAGTTGAATTTATCTAGAAGAATAGCTGAGGTGTGTA
TGGCTAATGGTGTTGTTGTTTATCCTGGTAAAGGTACTATTGATGGTGTCATTGGTGATC
ATATAATTATCGCTCCAAGTTTTACTATAACCTCTGAAGATATTGACCATATTGTAGAGC
TTGTCTCTAAATCACTTAGTGAGTTTATGAATGAAATTTTATAATCATTATGTAAAATAT
ATGGATATCGATATGATGATAGTTGGTGTATTATGGATCGACGTAGATTTCGCACCAGAC
TGGTTCCAGAATACTGCTAGGGGTGAGATCACAGATCCAATAATTTGTTCTCTCTCCAGA
CAACCACCACAACAACCCAAAAATTCACCGCCAAAAAAAAAAAAAATAATAAAGAATCAA
ATGCCAACCAGACAACCAACGAGCCAACAAACATCAACTTGGATTTAGATACCAGAATCA
CCATAACTGATTAACCCTACTAAGCACAATATAATCTATT

Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -808 -809 -810 -811 -812 -813 -814 -815 -816 -817 -818 -819 -820 -821 -822 -823 -824 -825 -826 -827 -828 -829 -830 -831 -832 -833 -834 -835 -836 -837 -838 -839 -840 -841 -842 -843 -844 -845 -846 -847 -848 -849 -850 -851 -852 -853 -854 -855 -856 -857 -858 -859 -860 -861 -862 -863 -864 -865 -866 -867 -868 -869 -870 -871 -872 -873 -874 -875 -876 -877 -878 -879 -880 -881 -882 -883 -884 -885 -886 -887 -888 -889 -890 -891 -892 -893 -894 -895 -896 -897 -898 -899 -900 -901 -902 -903 -904 -905 -906 -907 -908 -909 -910 -911 -912 -913 -914 -915 -916 -917 -918 -919 -920 -921 -922 -923 -924 -925 -926 -927 -928 -929 -930 -931 -932 -933 -934 -935 -936 -937 -938 -939 -940 -941 -942 -943 -944 -945 -946 -947 -948 -949 -950 -951 -952 -953 -954 -955 -956 -957 -958 -959 -960 -961 -962 -963 -964 -965 -966 -967 -968 -969 -970 -971

>CTRG_01472	Upstream Sequence Complementary Strand
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>NNNNNGGGTGGAGGCAACAGAACGCAATACCAATCATTTTTTGAATAAAACAC
CCAATAGATTACCGAGTTCGTACAAATTAACACCAGAAAGTATAGTTTCAAAACGGGAAA
GTACACGTCGACCAATACGACAAGTTGTTTAATAATTCTCCCTATTAGAAAACCTATTAC
AGTTCTTTTACCCTCTTATAAATCCACTTGTTAACGAACGTTTTCATCCACACTAAGGTT
ATCAACATCTATAAGCTCCTTCTCCCAACAAGACCCCATAACTTAAACCATCTGTCGTTC
TCTTATTGTTTGGTAAACTAGGGCTCAACTTAAATAGATCTTCTTATCGACTCCACACAT
ACCGATTACCACAACAACAAATAGGACCATTTCCATGATAACTACCACAGTAACCACTAG
TATATTAATAGCGAGGTTCAAAATGATATTGGAGACTTCTATAACTGGTATAACATCTCG
AACAGAGATTTAGTGAATCACTCAAATACTTACTTTAAAATATTAGTAATACATTTTATA
TACCTATAGCTATACTACTATCAACCACATAATACCTAGCTGCATCTAAAGCGTGGTCTG
ACCAAGGTCTTATGACGATCCCCACTCTAGTGTCTAGGTTATTAAACAAGAGAGAGGTCT
GTTGGTGGTGTTGTTGGGTTTTTAAGTGGCGGTTTTTTTTTTTTTTATTATTTCTTAGTT
TACGGTTGGTCTGTTGGTTGCTCGGTTGTTTGTAGTTGAACCTAAATCTATGGTCTTAGT
GGTATTGACTAATTGGGATGATTCGTGTTATATTAGATAA