PathoYeastract
C.tropicalis
YEASTRACT+ INESC-ID IST IBB
Home > Search by DNA motif > Result > View in Promoter Contact/Credits     Tutorial     Help

 

Back to top top

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!
Standard Name CTRG_01553
Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -456 -455 -454 -453 -452 -451 -450 -449 -448 -447 -446 -445 -444 -443 -442 -441 -440 -439 -438 -437 -436 -435 -434 -433 -432 -431 -430 -429 -428 -427 -426 -425 -424 -423 -422 -421 -420 -419 -418 -417 -416 -415 -414 -413 -412 -411 -410 -409 -408 -407 -406 -405 -404 -403 -402 -401 -400 -399 -398 -397 -396 -395 -394 -393 -392 -391 -390 -389 -388 -387 -386 -385 -384 -383 -382 -381 -380 -379 -378 -377 -376 -375 -374 -373 -372 -371 -370 -369 -368 -367 -366 -365 -364 -363 -362 -361 -360 -359 -358 -357 -356 -355 -354 -353 -352 -351 -350 -349 -348 -347 -346 -345 -344 -343 -342 -341 -340 -339 -338 -337 -336 -335 
>CTRG_01553    upstream sequence, from -1000 to -1, size 1000
AACTTCAGTGACTTTCAAAATGGATTAAGTCGTTATAATTTCAATTTGGGTTGCAATAAA
CCCCCAACAAAACCATTAGAACAACATCCAATTTTCAGAAACTTGATTGATATTGTTGAC
ACCAGTTATTCAGAAGAAGAAGGTGAAGATATTGCATCTAAAGGTAAACAGATTATCAGT
GTTACAAATCCATTTGTTCCAAAGCCATTCTACGGAAAATCCGTGTATTCATCCAAGTTG
CTCCATCACAAATTCGGAAACAGTTGGGGAAAACCAGCAGTTGTTAATTTCACTGTTCCA
ACCAATATTTCATTTGAAGCTGTTGTGTTGACTTTACATACTGAGGTTGATGGAGTACAA
TTTGACAGATTAGCCAATTTGTTTGTTGATGGAGTTCAAGTCTGGAGAACATCTACTATT
GAACCAAGTGGCCGTAAAAAATTCAGTGATTTCAAGAAGGATATCAGTAAATACTCCAAG
CTTTTCAAGAAGGATAATGTTCAGATTTTGTTCCAGTTGGATAACTTGTTGACTGATAAA
TTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>NNNNAAATCAAATGAAAGAAAAACTAAAGA
AGGTGATCGTCCTGTCTTAAATTACCCACCTCTTCTCCCCCACGAAATCAAAATTTGGTA
AGCGGCCACCTAACAACAGAAAGTGAAATAAAAAAGGAAATAAAGGGAACCACTCCACTT
CAGTGGCAGCTCCATATACACGAAATCACCGGCAACTTTTTCCAGCAAAATGAACCATAG
TAACCAAAGGAGGAATAGGAAGCAAAGGAACTTAAGGAACCAAAGGATCCAAAGGACCTA
AAGGAACCAAAGGAACCAAAGGAGCCAAAGGATCCACCTC
Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -303 -304 -305 -306 -307 -308 -309 -310 -311 -312 -313 -314 -315 -316 -317 -318 -319 -320 -321 -322 -323 -324 -325 -326 -327 -328 -329 -330 -331 -332 -333 -334 -335 -336 -337 -338 -339 -340 -341 -342 -343 -344 -345 -346 -347 -348 -349 -350 -351 -352 -353 -354 -355 -356 -357 -358 -359 -360 -361 -362 -363 -364 -365 -366 -367 -368 -369 -370 -371 -372 -373 -374 -375 -376 -377 -378 -379 -380 -381 -382 -383 -384 -385 -386 -387 -388 -389 -390 -391 -392 -393 -394 -395 -396 -397 -398 -399 -400 -401 -402 -403 -404 -405 -406 -407 -408 -409 -410 -411 -412 -413 -414 -415 -416 -417 -418 -419 -420 -421 -422 -423 -424 -425 -426 -427 -428 
>CTRG_01553	Upstream Sequence Complementary Strand
TTGAAGTCACTGAAAGTTTTACCTAATTCAGCAATATTAAAGTTAAACCCAACGTTATTT
GGGGGTTGTTTTGGTAATCTTGTTGTAGGTTAAAAGTCTTTGAACTAACTATAACAACTG
TGGTCAATAAGTCTTCTTCTTCCACTTCTATAACGTAGATTTCCATTTGTCTAATAGTCA
CAATGTTTAGGTAAACAAGGTTTCGGTAAGATGCCTTTTAGGCACATAAGTAGGTTCAAC
GAGGTAGTGTTTAAGCCTTTGTCAACCCCTTTTGGTCGTCAACAATTAAAGTGACAAGGT
TGGTTATAAAGTAAACTTCGACAACACAACTGAAATGTATGACTCCAACTACCTCATGTT
AAACTGTCTAATCGGTTAAACAAACAACTACCTCAAGTTCAGACCTCTTGTAGATGATAA
CTTGGTTCACCGGCATTTTTTAAGTCACTAAAGTTCTTCCTATAGTCATTTATGAGGTTC
GAAAAGTTCTTCCTATTACAAGTCTAAAACAAGGTCAACCTATTGAACAACTGACTATTT
AACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>NTTTAGTTTACTTTCTTTTTGATTTCT
TCCACTAGCAGGACAGAATTTAATGGGTGGAGAAGAGGGGGTGCTTTAGTTTTAAACCAT
TCGCCGGTGGATTGTTGTCTTTCACTTTATTTTTTCCTTTATTTCCCTTGGTGAGGTGAA
GTCACCGTCGAGGTATATGTGCTTTAGTGGCCGTTGAAAAAGGTCGTTTTACTTGGTATC
ATTGGTTTCCTCCTTATCCTTCGTTTCCTTGAATTCCTTGGTTTCCTAGGTTTCCTGGAT
TTCCTTGGTTTCCTTGGTTTCCTCGGTTTCCTAGGTGGAG
w3c xhtml validator w3c css validator