C.tropicalis - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CTRG_03063

Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -190 -188 -187 -186 -185 -184 -183 -182 -181 -180 -179 -178 -177 -176 -175 -174 -173 -172 -171 -170 -169 -168 -167 -166 -165 -164 -163 -162 -161 -160 -159 -158 -157 -156 -155 -154 -153 -152 -151 -150 -149 -148 -147 -146 -145 -144 -143 -142 -141 -140 -139 -138 -137 -136 -135 -134 -133 -132 -131 -130 -129 -128 -127 -126 -125 -124 -123 -122 -121 -120 -119 -118 -117 -116 -115 -114 -113 -112 -111 -110 -109 -108 -107 -106 -105 -104 -103 -102 -101 -100 -99 -98 -97 -96 -95 -94 -93 -92 -91 -90 -89 -88 -87 -86 -85 -84 -83 -82 -81 -80 -79 -78 -77 -76 -75 -74 -73 -72 -71 -70 -69 -68 -67 -66 -65 -64 -63 -62 -61 -60 -59 -58 -57 -56 -55 -54 -53 -52 -51 -50 -49 -48 -47 -46 -45 -44 -43 -42 -41

>CTRG_03063    upstream sequence, from -1000 to -1, size 1000
TGAAACTACGGTGGATGAGATCAGGAATGTAATTGATCCAAACTTCCCAGAGGATAAATA
CGAGGAATATGTGAAAACTTTCACTAAGCCATCACAAACCCCCGGATTTAGAGAAACTAT
CTATGATATAATCAATGCAAATACTACTGACGCAATTCATCTGTTTATTATTTTGACAAC
TGCTTTAGATTCAAGAATTTTGGCTCCAACTTTGACCAATTCTTTAACCCCAATCAGGGA
AATGAGTTTACCAGAACGTGAAAGATTATTGGCTTCGTGGCGTGACTCTCCTATTGCAGC
AAAGAGAAGATTATTTAGATTGGTTTCTTCGCTCACGTTAAGCACATTCGTTAGATTGGC
TAGTGACTTGCATTTGAAAGCCATCCATTACCCTGAAAGAGATTTACGTGAAAAGGCATA
TGAATCCCAGGAAATTGATCCTTTCAAGTACCTGTTTGAAGAGAAGCCTAAATTTGATGG
TGCTGAATTGTATTTGCCTGATATTGATGTTATCATCATTGGATCTGGTGCTGGTGCTGG
TGTAGTAGCCCATACATTAGCAAATGATGGTTACAAGACTTTAGTTTTGGAAAAGGGAAG
ATATTTTAGTAACTTAGAATTGAATTTTAACGACAAAGATGGGGTCCAAGAATTGTACCA
AGGAGGTGGTGCTTTGACCACTACTAACCAGCAAATGTTTATTCTTGCAGGCTCCACTTT
TGGTGGTGGTACCACTGTCAATTGGTCAGCTTGTCTTAAAACTCCATTTAAAGTACGTAA
AGAATGGTATGACGACTATGGTGTTGAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNan>N
>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNNTTCCTTGGCCAACA

Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -14 -15 -16 -17 -18 -19 -20 -21 -22 -23 -24 -25 -26 -27 -28 -29 -30 -31 -32 -33 -34 -35 -36 -37 -38 -39 -40 -41 -42 -43 -44 -45 -46 -47 -48 -49 -50 -51 -52 -53 -54 -55 -56 -57 -58 -59 -60 -61 -62 -63 -64 -65 -66 -67 -68 -69 -70 -71 -72 -73 -74 -75 -76 -77 -78 -79 -80 -81 -82 -83 -84 -85 -86 -87 -88 -89 -90 -91 -92 -93 -94 -95 -96 -97 -98 -99 -100 -101 -102 -103 -104 -105 -106 -107 -108 -109 -110 -111 -112 -113 -114 -115 -116 -117 -118 -119 -120 -121 -122 -123 -124 -125 -126 -127 -128 -129 -130 -131 -132 -133 -134 -135 -136 -137 -138 -139 -140 -141 -142 -143 -144 -145 -146 -147 -148 -149 -150 -151 -152 -153 -154 -155 -156 -157 -158 -159

>CTRG_03063	Upstream Sequence Complementary Strand
ACTTTGATGCCACCTACTCTAGTCCTTACATTAACTAGGTTTGAAGGGTCTCCTATTTAT
GCTCCTTATACACTTTTGAAAGTGATTCGGTAGTGTTTGGGGGCCTAAATCTCTTTGATA
GATACTATATTAGTTACGTTTATGATGACTGCGTTAAGTAGACAAATAATAAAACTGTTG
ACGAAATCTAAGTTCTTAAAACCGAGGTTGAAACTGGTTAAGAAATTGGGGTTAGTCCCT
TTACTCAAATGGTCTTGCACTTTCTAATAACCGAAGCACCGCACTGAGAGGATAACGTCG
TTTCTCTTCTAATAAATCTAACCAAAGAAGCGAGTGCAATTCGTGTAAGCAATCTAACCG
ATCACTGAACGTAAACTTTCGGTAGGTAATGGGACTTTCTCTAAATGCACTTTTCCGTAT
ACTTAGGGTCCTTTAACTAGGAAAGTTCATGGACAAACTTCTCTTCGGATTTAAACTACC
ACGACTTAACATAAACGGACTATAACTACAATAGTAGTAACCTAGACCACGACCACGACC
ACATCATCGGGTATGTAATCGTTTACTACCAATGTTCTGAAATCAAAACCTTTTCCCTTC
TATAAAATCATTGAATCTTAACTTAAAATTGCTGTTTCTACCCCAGGTTCTTAACATGGT
TCCTCCACCACGAAACTGGTGATGATTGGTCGTTTACAAATAAGAACGTCCGAGGTGAAA
ACCACCACCATGGTGACAGTTAACCAGTCGAACAGAATTTTGAGGTAAATTTCATGCATT
TCTTACCATACTGCTGATACCACAACTTAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNN
>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNNNNAAGGAACCGGTTGT