C.tropicalis - PathoYeastract

View Consensus in Promoter

Warning! Overlapping consensus sequences found in either strands may not be highlighted correctly!

Standard Name

CTRG_03536

Promoter Sequence

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -521 -520 -519 -518 -517 -516 -515 -514 -513 -512 -511 -510 -509 -508 -507 -506 -505 -504 -503 -502 -501 -500 -499 -498 -497 -496 -495 -494 -493 -492 -491 -490 -489 -488 -487 -486 -485 -484 -483 -482 -481 -480 -479 -478 -477 -476 -475 -474 -473 -472 -471 -470 -469 -468 -467 -466 -465 -464 -463 -462 -461 -460 -459 -458 -457 -456 -455 -454 -453 -452 -451 -450 -449 -448 -447 -446 -445 -444 -443 -442 -441 -440 -439 -438 -437 -436 -435 -434 -433 -432 -431 -430 -429 -428 -427 -426 -425 -424 -423 -422 -421 -420 -419 -418 -417 -416 -415 -414 -413 -412 -411 -410 -409 -408

>CTRG_03536    upstream sequence, from -1000 to -1, size 1000
TGACAACAATTGATGGTACTTCTCGTAAGTTTATCATTAGTGGTGTCGATGAAGATTACT
CCACTTCTGAATATATTTACTCAGTTGATTTCACCAATGCATTTGATGGTAAAACATGTT
CTGATGAGGATTTTGAAGAATTTGTCGCTAGACAAATTGATGATAATGAACCAATTTGTG
TTTATGGACATCGTGAAAAATTCAAGAGAAGAAAGCAAGATGCTAAATGTTTTGTTAATA
AACTTTTTGAAGATGTTAAAGTCATTGATGATCCTTGTCAATGTACTGAAGTCGATTTTG
AATGTAATGTTGGATTTAAGTTATCTGAAAAGGGAGCACATGTTTGTGTTCCTGATGCTA
AGCAAATTTCTAAAATGTGTCAATCCAAGAAAGAATTGAAATTAACAGATAAAGTATTGG
TACAAGGAAATAAATGTGATATGGGTAACAAAAAACTCAGATTTTATTTCCGAAGAAACN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNNTTGCTGATTCAGAAGACAAGTCTGCTCAGACAATGTTGTTG
TTAAACTCGTGATGATAAACTTTGGATTTCAAATAATGGTGGAGAATCATTTGTTGAAGT
TCCTGTTTCTGATAAAATCTTGGGTTTCTATACTGGACCTGTTGCTGGTACAGTTATTCT
CATCACTGATTCGGATATTATTTATGTATCTGATGATGGTGGTGCAACTTTCACTAAGCA
AAAGGCACCAAGTTCTTTATCTTCTCAAGTTTACAGAGCAGTTTCTTTCCACTATACTAA
TGCCAAGGAATTCATTTGGTTTGGTGAAGATTGTAGCAATGGTAAATGTACCGTAAATGC
ATATTATACTGATGATGCCGGTGCTTCGTTTAATGAGTTG

Promoter Sequence
Complementary Strand

Consensus
TKYWKHTKKTKHTTTTTKTTKYTTTKWTT: -381 -382 -383 -384 -385 -386 -387 -388 -389 -390 -391 -392 -393 -394 -395 -396 -397 -398 -399 -400 -401 -402 -403 -404 -405 -406 -407 -408 -409 -410 -411 -412 -413 -414 -415 -416 -417 -418 -419 -420 -421 -422 -423 -424 -425 -426 -427 -428 -429 -430 -431 -432 -433 -434 -435 -436 -437 -438 -439 -440 -441 -442 -443 -444 -445 -446 -447 -448 -449 -450 -451 -452 -453 -454 -455 -456 -457 -458 -459 -460 -461 -462 -463 -464 -465 -466 -467 -468 -469 -470 -471 -472 -473 -474 -475 -476 -477 -478 -479 -480 -481 -482 -483 -484 -485 -486 -487 -488 -489 -490 -491 -492 -496

>CTRG_03536	Upstream Sequence Complementary Strand
ACTGTTGTTAACTACCATGAAGAGCATTCAAATAGTAATCACCACAGCTACTTCTAATGA
GGTGAAGACTTATATAAATGAGTCAACTAAAGTGGTTACGTAAACTACCATTTTGTACAA
GACTACTCCTAAAACTTCTTAAACAGCGATCTGTTTAACTACTATTACTTGGTTAAACAC
AAATACCTGTAGCACTTTTTAAGTTCTCTTCTTTCGTTCTACGATTTACAAAACAATTAT
TTGAAAAACTTCTACAATTTCAGTAACTACTAGGAACAGTTACATGACTTCAGCTAAAAC
TTACATTACAACCTAAATTCAATAGACTTTTCCCTCGTGTACAAACACAAGGACTACGAT
TCGTTTAAAGATTTTACACAGTTAGGTTCTTTCTTAACTTTAATTGTCTATTTCATAACC
ATGTTCCTTTATTTACACTATACCCATTGTTTTTTGAGTCTAAAATAAAGGCTTCTTTGN
NNNNNNNNNNNNNNNNNNNNNNNN>NNNNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNpan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>Npan>N/>>N>N>N>N>N>N>N>N>N>N>N>N>N>N>NNNNNAACGACTAAGTCTTCTGTTCAGACGAGTCTGTTACAACAAC
AATTTGAGCACTACTATTTGAAACCTAAAGTTTATTACCACCTCTTAGTAAACAACTTCA
AGGACAAAGACTATTTTAGAACCCAAAGATATGACCTGGACAACGACCATGTCAATAAGA
GTAGTGACTAAGCCTATAATAAATACATAGACTACTACCACCACGTTGAAAGTGATTCGT
TTTCCGTGGTTCAAGAAATAGAAGAGTTCAAATGTCTCGTCAAAGAAAGGTGATATGATT
ACGGTTCCTTAAGTAAACCAAACCACTTCTAACATCGTTACCATTTACATGGCATTTACG
TATAATATGACTACTACGGCCACGAAGCAAATTACTCAAC